RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 RNASE3P12724 160 aaKnown RBP14.6□□□□□ -0.07
TREX1-205ENST00000625293 BTF3P20290 206 aaKnown RBP14.6□□□□□ -0.07
TREX1-205ENST00000625293 DDTP30046 118 aa14.6□□□□□ -0.07
TREX1-205ENST00000625293 LEPROTL1O95214 131 aa14.6□□□□□ -0.07
TREX1-205ENST00000625293 AMTNQ6UX39 209 aa14.6□□□□□ -0.07
TREX1-205ENST00000625293 LINC00173Q6ZV60 143 aa14.6□□□□□ -0.07
TREX1-205ENST00000625293 TMEM61Q8N0U2 210 aa14.6□□□□□ -0.07
TREX1-205ENST00000625293 LOC389332A0A1B0GUA5 103 aa14.59□□□□□ -0.07
TREX1-205ENST00000625293 A8MTW9 85 aa14.59□□□□□ -0.07
TREX1-205ENST00000625293 CRXO43186 299 aaPredicted RBP14.59□□□□□ -0.07
TREX1-205ENST00000625293 S100A4P26447 101 aaKnown RBP14.59□□□□□ -0.07
TREX1-205ENST00000625293 DEFB114Q30KQ6 69 aa14.59□□□□□ -0.07
TREX1-205ENST00000625293 SMIM15Q7Z3B0 74 aa14.59□□□□□ -0.07
TREX1-205ENST00000625293 A0A096LNJ9 63 aa14.58□□□□□ -0.08
TREX1-205ENST00000625293 NXPH4O95158 308 aa14.58□□□□□ -0.08
TREX1-205ENST00000625293 SPATA12Q7Z6I5 190 aa14.58□□□□□ -0.08
TREX1-205ENST00000625293 C11orf44Q8N8P7 122 aa14.58□□□□□ -0.08
TREX1-205ENST00000625293 LINC01546A6NGU7 62 aa14.57□□□□□ -0.08
TREX1-205ENST00000625293 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.57□□□□□ -0.08
TREX1-205ENST00000625293 CITED2Q99967 270 aaPredicted RBP14.57□□□□□ -0.08
TREX1-205ENST00000625293 TMEM70Q9BUB7 260 aa14.57□□□□□ -0.08
TREX1-205ENST00000625293 TIMM8BQ9Y5J9 83 aaPredicted RBP14.57□□□□□ -0.08
TREX1-205ENST00000625293 TRAV12-3A0A0B4J271 114 aa14.57□□□□□ -0.08
TREX1-205ENST00000625293 NDUFA7O95182 113 aa14.57□□□□□ -0.08
TREX1-205ENST00000625293 TNFRSF6BO95407 300 aa14.57□□□□□ -0.08
TREX1-205ENST00000625293 CDKN1BP46527 198 aa14.57□□□□□ -0.08
TREX1-205ENST00000625293 C20orf144Q9BQM9 153 aa14.57□□□□□ -0.08
TREX1-205ENST00000625293 TSSC4Q9Y5U2 329 aaPredicted RBP14.57□□□□□ -0.08
TREX1-205ENST00000625293 CCL24O00175 119 aa14.56□□□□□ -0.08
TREX1-205ENST00000625293 SPRY2O43597 315 aa14.56□□□□□ -0.08
TREX1-205ENST00000625293 IGKV3-20P01619 116 aa14.56□□□□□ -0.08
TREX1-205ENST00000625293 GATA1P15976 413 aaPredicted RBP14.56□□□□□ -0.08
TREX1-205ENST00000625293 TSPOP30536 169 aa14.56□□□□□ -0.08
TREX1-205ENST00000625293 FAM159AQ6UWV7 190 aa14.56□□□□□ -0.08
TREX1-205ENST00000625293 DYNLRB2Q8TF09 96 aa14.56□□□□□ -0.08
TREX1-205ENST00000625293 VAMP8Q9BV40 100 aa14.56□□□□□ -0.08
TREX1-205ENST00000625293 MAP1LC3AQ9H492 121 aa14.56□□□□□ -0.08
TREX1-205ENST00000625293 PHLDA3Q9Y5J5 127 aa14.56□□□□□ -0.08
TREX1-205ENST00000625293 M0R381 172 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 DEFB131AP59861 70 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 DEFB125Q8N687 156 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 NRACQ8N912 160 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 TMEM158Q8WZ71 300 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 TRAV12-2A0A075B6T6 113 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 A0A1W2PRX2 142 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 PRSS47A8MTI9 375 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 SYS1-DBNDD2H3BUS1 97 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 HLA-DRB4P13762 266 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 SPINK13Q1W4C9 94 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 HSPB8Q9UJY1 196 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 HLA-DRB4X5D2U9 266 aa14.55□□□□□ -0.08
TREX1-205ENST00000625293 CD300EQ496F6 205 aaPredicted RBP14.54□□□□□ -0.08
TREX1-205ENST00000625293 OR2K2Q8NGT1 345 aa14.54□□□□□ -0.08
TREX1-205ENST00000625293 PAM16Q9Y3D7 125 aa14.54□□□□□ -0.08
TREX1-205ENST00000625293 KNCNA6PVL3 124 aa14.53□□□□□ -0.08
TREX1-205ENST00000625293 MRAP2Q96G30 205 aa14.53□□□□□ -0.08
TREX1-205ENST00000625293 ZNF747Q9BV97 191 aa14.53□□□□□ -0.08
TREX1-205ENST00000625293 MAP6D1Q9H9H5 199 aa14.53□□□□□ -0.08
TREX1-205ENST00000625293 TENM1Q9UKZ4 2725 aa14.53□□□□□ -0.08
TREX1-205ENST00000625293 IGLV2-18A0A075B6J9 118 aa14.52□□□□□ -0.08
TREX1-205ENST00000625293 H3BMM0 161 aa14.52□□□□□ -0.08
TREX1-205ENST00000625293 SPAG8Q99932 426 aaPredicted RBP14.52□□□□□ -0.08
TREX1-205ENST00000625293 DPH3P1Q9H4G8 78 aa14.52□□□□□ -0.08
TREX1-205ENST00000625293 ZNF256Q9Y2P7 627 aaPredicted RBP14.52□□□□□ -0.08
TREX1-205ENST00000625293 STAB1Q9NY15 2570 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 TRAV26-2A0A0B4J265 109 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 TRAV25A0A0B4J276 109 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 IGHV3-16A0A0C4DH30 117 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 PROK1P58294 105 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 POM121L12Q8N7R1 296 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 C14orf144Q96I85 54 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 C9orf85Q96MD7 179 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 JMJD8Q96S16 334 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 NDUFAF3Q9BU61 184 aa14.52□□□□□ -0.09
TREX1-205ENST00000625293 NXT2Q9NPJ8 142 aaKnown RBP14.52□□□□□ -0.09
TREX1-205ENST00000625293 RBMY1BA6NDE4 496 aaKnown RBP14.51□□□□□ -0.09
TREX1-205ENST00000625293 RBMY1EA6NEQ0 496 aaKnown RBP14.51□□□□□ -0.09
TREX1-205ENST00000625293 CD7P09564 240 aa14.51□□□□□ -0.09
TREX1-205ENST00000625293 RBMY1DP0C7P1 496 aaKnown RBP14.51□□□□□ -0.09
TREX1-205ENST00000625293 CTAG1AP78358 180 aa14.51□□□□□ -0.09
TREX1-205ENST00000625293 DEFA6Q01524 100 aa14.51□□□□□ -0.09
TREX1-205ENST00000625293 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
TREX1-205ENST00000625293 MAP1LC3CQ9BXW4 147 aa14.51□□□□□ -0.09
TREX1-205ENST00000625293 IGHV1OR15-1A0A075B7D0 117 aa14.5□□□□□ -0.09
TREX1-205ENST00000625293 OR4C46A6NHA9 309 aa14.5□□□□□ -0.09
TREX1-205ENST00000625293 ADARB2-AS1A8MUL3 147 aa14.5□□□□□ -0.09
TREX1-205ENST00000625293 KIF25-AS1Q9Y6Z4 181 aa14.5□□□□□ -0.09
TREX1-205ENST00000625293 HBDP02042 147 aa14.5□□□□□ -0.09
TREX1-205ENST00000625293 ZNF124Q15973 351 aa14.5□□□□□ -0.09
TREX1-205ENST00000625293 C14orf178Q8N769 122 aaPredicted RBP14.5□□□□□ -0.09
TREX1-205ENST00000625293 Q8N8P6 123 aa14.5□□□□□ -0.09
TREX1-205ENST00000625293 AP1S3Q96PC3 154 aa14.5□□□□□ -0.09
TREX1-205ENST00000625293 RBMY1A1P0DJD3 496 aaKnown RBP14.49□□□□□ -0.09
TREX1-205ENST00000625293 RBMY1CP0DJD4 496 aa14.49□□□□□ -0.09
TREX1-205ENST00000625293 RBMY1FQ15415 496 aaKnown RBP14.49□□□□□ -0.09
TREX1-205ENST00000625293 ATOH7Q8N100 152 aa14.49□□□□□ -0.09
TREX1-205ENST00000625293 LINC00315P59091 139 aa14.48□□□□□ -0.09
TREX1-205ENST00000625293 SPATA45Q537H7 98 aa14.48□□□□□ -0.09
TREX1-205ENST00000625293 Q8N1Y9 231 aa14.48□□□□□ -0.09
TREX1-205ENST00000625293 MDFICQ9P1T7 246 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms