RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PYGO2Q9BRQ0 406 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 NKX6-2Q9C056 277 aaPredicted RBP9.11□□□□□ -0.95
SNX1-214ENST00000625244 KLF12Q9Y4X4 402 aa9.11□□□□□ -0.95
SNX1-214ENST00000625244 SERTM2A0A1B0GWG4 89 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 A0A1W2PRE2 83 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 RBAKDNA6NC62 111 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 GYPEP15421 78 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 SLAQ13239 276 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 ODF1Q14990 250 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 C5orf17Q8NAS9 161 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 SUN5Q8TC36 379 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 ODF3Q96PU9 254 aa9.1□□□□□ -0.95
SNX1-214ENST00000625244 IGKV2-40A0A087WW87 121 aaPredicted RBP9.09□□□□□ -0.95
SNX1-214ENST00000625244 IGHV3-38A0A0C4DH36 116 aa9.09□□□□□ -0.95
SNX1-214ENST00000625244 A0A1B0GV50 99 aa9.09□□□□□ -0.95
SNX1-214ENST00000625244 IFNA7P01567 189 aa9.09□□□□□ -0.95
SNX1-214ENST00000625244 IGKV2D-40P01614 121 aaPredicted RBP9.09□□□□□ -0.95
SNX1-214ENST00000625244 UBE2G2P60604 165 aa9.09□□□□□ -0.95
SNX1-214ENST00000625244 SUMO1P63165 101 aaKnown RBP9.09□□□□□ -0.95
SNX1-214ENST00000625244 MBD3L1Q8WWY6 194 aa9.09□□□□□ -0.95
SNX1-214ENST00000625244 DIRC3C9JPN6 131 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 F6UZH7 168 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 ZNF138P52744 262 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 ERCC8Q13216 396 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 LINC01556Q5JQF7 62 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 CST9LP1Q5W188 147 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 ALKAL2Q6UX46 152 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 C9orf47Q6ZRZ4 202 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 GOLT1AQ6ZVE7 132 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 ZNF680Q8NEM1 530 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 NDFIP1Q9BT67 221 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 MRPL16Q9NX20 251 aaKnown RBP9.08□□□□□ -0.96
SNX1-214ENST00000625244 ARL2-SNX15V9GYD0 113 aa9.08□□□□□ -0.96
SNX1-214ENST00000625244 IFNA1P01562 189 aa9.07□□□□□ -0.96
SNX1-214ENST00000625244 IGLV2-11P01706 119 aa9.07□□□□□ -0.96
SNX1-214ENST00000625244 Q6ZRU5 148 aa9.07□□□□□ -0.96
SNX1-214ENST00000625244 VGLL1Q99990 258 aa9.07□□□□□ -0.96
SNX1-214ENST00000625244 MANBALQ9NQG1 85 aa9.07□□□□□ -0.96
SNX1-214ENST00000625244 FBLL1A6NHQ2 334 aaKnown RBP9.06□□□□□ -0.96
SNX1-214ENST00000625244 FAM74A7A6NL05 159 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 GGTLC3B5MD39 225 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 CT45A10P0DMU9 189 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 TCL1AP56279 114 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 BLOC1S1P78537 153 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 CYB561D1Q8N8Q1 229 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 PCNPQ8WW12 178 aaKnown RBP9.06□□□□□ -0.96
SNX1-214ENST00000625244 TCEAL7Q9BRU2 100 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 AGPAT4-IT1Q9H0P7 198 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 ZNF492Q9P255 531 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 EPDR1Q9UM22 224 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
SNX1-214ENST00000625244 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 TRBV7-9A0A0J9YWB2 115 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 RBFOX3A6NFN3 312 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 PAGE4O60829 102 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 TCRAP04437 139 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 GPX1P07203 203 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 NMBP08949 121 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 GNG5P63218 68 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 HIST1H2BAQ96A08 127 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 TM2D2Q9BX73 214 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 GNG13Q9P2W3 67 aa9.05□□□□□ -0.96
SNX1-214ENST00000625244 TRGV4A0A0C4DH28 118 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 C7orf71A4D174 169 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 PEX7O00628 323 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 IGHV3-30P01768 117 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 IGHV3-33P01772 117 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 SFTA3P0C7M3 94 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 IGHV3-30-3P0DP02 117 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 IGHV3-30-5P0DP03 117 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 TDRG1Q3Y452 100 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 ANXA2RQ3ZCQ2 193 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 LELP1Q5T871 98 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 Q8TAT8 98 aa9.04□□□□□ -0.96
SNX1-214ENST00000625244 CRISP2P16562 243 aa9.03□□□□□ -0.96
SNX1-214ENST00000625244 TAGLN2P37802 199 aaKnown RBP9.03□□□□□ -0.96
SNX1-214ENST00000625244 UBE2G1P62253 170 aa9.03□□□□□ -0.96
SNX1-214ENST00000625244 EIF4E3Q8N5X7 224 aaKnown RBP9.03□□□□□ -0.96
SNX1-214ENST00000625244 TMEM75Q8N9X5 138 aa9.03□□□□□ -0.96
SNX1-214ENST00000625244 BAALCQ8WXS3 180 aa9.03□□□□□ -0.96
SNX1-214ENST00000625244 TXNDC17Q9BRA2 123 aa9.03□□□□□ -0.96
SNX1-214ENST00000625244 TP53TG3Q9ULZ0 132 aa9.03□□□□□ -0.96
SNX1-214ENST00000625244 ORM1P02763 201 aa9.02□□□□□ -0.97
SNX1-214ENST00000625244 RNASE4P34096 147 aaKnown RBP9.02□□□□□ -0.97
SNX1-214ENST00000625244 AKR1C3P42330 323 aa9.02□□□□□ -0.97
SNX1-214ENST00000625244 FLI1Q01543 452 aaPredicted RBP9.02□□□□□ -0.97
SNX1-214ENST00000625244 PRNTQ86SH4 94 aa9.02□□□□□ -0.97
SNX1-214ENST00000625244 ZNF479Q96JC4 524 aa9.02□□□□□ -0.97
SNX1-214ENST00000625244 FAM19A4Q96LR4 140 aa9.02□□□□□ -0.97
SNX1-214ENST00000625244 TREM1Q9NP99 234 aa9.02□□□□□ -0.97
SNX1-214ENST00000625244 PSG8Q9UQ74 426 aa9.02□□□□□ -0.97
SNX1-214ENST00000625244 TRAV8-1A0A0A6YYK1 113 aa9.01□□□□□ -0.97
SNX1-214ENST00000625244 LOC100131303A0A0U1RQF7 123 aa9.01□□□□□ -0.97
SNX1-214ENST00000625244 KLLNB2CW77 178 aa9.01□□□□□ -0.97
SNX1-214ENST00000625244 RGS13O14921 159 aa9.01□□□□□ -0.97
SNX1-214ENST00000625244 TIRAPP58753 221 aa9.01□□□□□ -0.97
SNX1-214ENST00000625244 SAPCD1Q5SSQ6 148 aa9.01□□□□□ -0.97
SNX1-214ENST00000625244 FMC1Q96HJ9 113 aa9.01□□□□□ -0.97
SNX1-214ENST00000625244 S100A9P06702 114 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms