RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 TREM1Q9NP99 234 aa7.24□□□□□ -1.25
LINC00963-214ENST00000622680 C11orf21Q9P2W6 132 aa7.24□□□□□ -1.25
LINC00963-214ENST00000622680 RS1O15537 224 aa7.23□□□□□ -1.25
LINC00963-214ENST00000622680 ZNF80P51504 273 aaPredicted RBP7.23□□□□□ -1.25
LINC00963-214ENST00000622680 ZNF506Q5JVG8 444 aa7.23□□□□□ -1.25
LINC00963-214ENST00000622680 DAZ4Q86SG3 579 aaKnown RBP7.23□□□□□ -1.25
LINC00963-214ENST00000622680 KCNS1Q96KK3 526 aa7.23□□□□□ -1.25
LINC00963-214ENST00000622680 GTSF1LQ9H1H1 148 aa7.23□□□□□ -1.25
LINC00963-214ENST00000622680 DAZ3Q9NR90 486 aaKnown RBP7.23□□□□□ -1.25
LINC00963-214ENST00000622680 TNFSF18Q9UNG2 199 aa7.23□□□□□ -1.25
LINC00963-214ENST00000622680 TRBV6-4A0A1B0GX49 114 aa7.22□□□□□ -1.25
LINC00963-214ENST00000622680 A0A1W2PPV4 95 aa7.22□□□□□ -1.25
LINC00963-214ENST00000622680 HMGB3O15347 200 aaKnown RBP7.22□□□□□ -1.25
LINC00963-214ENST00000622680 PFDN1O60925 122 aa7.22□□□□□ -1.25
LINC00963-214ENST00000622680 TAS2R45P59539 299 aa7.22□□□□□ -1.25
LINC00963-214ENST00000622680 ACOT6Q3I5F7 207 aaPredicted RBP7.22□□□□□ -1.25
LINC00963-214ENST00000622680 RPL7L1Q6DKI1 246 aaKnown RBP7.22□□□□□ -1.25
LINC00963-214ENST00000622680 AKAP14Q86UN6 197 aa7.22□□□□□ -1.25
LINC00963-214ENST00000622680 ATP6V0E2Q8NHE4 81 aa7.22□□□□□ -1.25
LINC00963-214ENST00000622680 DEFB104AQ8WTQ1 72 aa7.22□□□□□ -1.25
LINC00963-214ENST00000622680 DNAJC30Q96LL9 226 aa7.22□□□□□ -1.25
LINC00963-214ENST00000622680 TM2D2Q9BX73 214 aa7.22□□□□□ -1.25
LINC00963-214ENST00000622680 RNF222A6NCQ9 220 aa7.21□□□□□ -1.26
LINC00963-214ENST00000622680 PGPEP1LA6NFU8 196 aa7.21□□□□□ -1.26
LINC00963-214ENST00000622680 KRTAP10-4P60372 401 aaPredicted RBP7.21□□□□□ -1.26
LINC00963-214ENST00000622680 RAB2AP61019 212 aa7.21□□□□□ -1.26
LINC00963-214ENST00000622680 FAM74A1Q5RGS3 127 aa7.21□□□□□ -1.26
LINC00963-214ENST00000622680 BAALCQ8WXS3 180 aa7.21□□□□□ -1.26
LINC00963-214ENST00000622680 C9orf85Q96MD7 179 aa7.21□□□□□ -1.26
LINC00963-214ENST00000622680 Q9UF83 564 aa7.21□□□□□ -1.26
LINC00963-214ENST00000622680 KANTRA0A1W2PQU2 76 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 GAGE12JA6NER3 117 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 GCGP01275 180 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 LINC00694P0DN24 101 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 RNASE3P12724 160 aaKnown RBP7.2□□□□□ -1.26
LINC00963-214ENST00000622680 ATP6V0CP27449 155 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 GAGE1Q13065 139 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 GAGE4Q13068 117 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 GAGE5Q13069 117 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 GAGE13Q4V321 117 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 OR10G9Q8NGN4 311 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 OR10G7Q8NGN6 311 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 OR2G3Q8NGZ4 309 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 ZNF471Q9BX82 626 aaPredicted RBP7.2□□□□□ -1.26
LINC00963-214ENST00000622680 SH3BGRL3Q9H299 93 aa7.2□□□□□ -1.26
LINC00963-214ENST00000622680 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
LINC00963-214ENST00000622680 G3V3Q6 166 aa7.19□□□□□ -1.26
LINC00963-214ENST00000622680 TAAR5O14804 337 aa7.19□□□□□ -1.26
LINC00963-214ENST00000622680 ARL14EPLP0DKL9 152 aa7.19□□□□□ -1.26
LINC00963-214ENST00000622680 MGST1P10620 155 aaKnown RBP7.19□□□□□ -1.26
LINC00963-214ENST00000622680 PQLC2Q6ZP29 291 aa7.19□□□□□ -1.26
LINC00963-214ENST00000622680 OR11H4Q8NGC9 324 aa7.19□□□□□ -1.26
LINC00963-214ENST00000622680 NDFIP1Q9BT67 221 aa7.19□□□□□ -1.26
LINC00963-214ENST00000622680 PARLQ9H300 379 aa7.19□□□□□ -1.26
LINC00963-214ENST00000622680 BOLA1Q9Y3E2 137 aa7.19□□□□□ -1.26
LINC00963-214ENST00000622680 A0A0D9SG52 128 aa7.18□□□□□ -1.26
LINC00963-214ENST00000622680 AKR1C8PQ5T2L2 129 aa7.18□□□□□ -1.26
LINC00963-214ENST00000622680 JPT2Q9H910 190 aa7.18□□□□□ -1.26
LINC00963-214ENST00000622680 IGKV2D-24A0A075B6R9 120 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 RBFOX3A6NFN3 312 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 HMSDA8MTL9 139 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 GGTLC3B5MD39 225 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 BCL2L11O43521 198 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 CIDEAO60543 219 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 IGLV2-11P01706 119 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 MBP02144 154 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 TCRAP04437 139 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 CDC34P49427 236 aaPredicted RBP7.17□□□□□ -1.26
LINC00963-214ENST00000622680 SERTAD4-AS1Q5TG53 156 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 TMUB2Q71RG4 321 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 PRNTQ86SH4 94 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 TCTE3Q8IZS6 198 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 KCNRGQ8N5I3 272 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 C14orf178Q8N769 122 aaPredicted RBP7.17□□□□□ -1.26
LINC00963-214ENST00000622680 SYT8Q8NBV8 401 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 CIRBP-AS1Q8TBR5 109 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 SAMD10Q9BYL1 202 aa7.17□□□□□ -1.26
LINC00963-214ENST00000622680 ACTR3CQ9C0K3 210 aaPredicted RBP7.17□□□□□ -1.26
LINC00963-214ENST00000622680 NKX2-5P52952 324 aaPredicted RBP7.16□□□□□ -1.26
LINC00963-214ENST00000622680 EIF5AP63241 154 aaKnown RBP7.16□□□□□ -1.26
LINC00963-214ENST00000622680 ZFP69Q49AA0 526 aa7.16□□□□□ -1.26
LINC00963-214ENST00000622680 TOR2AQ5JU69 321 aa7.16□□□□□ -1.26
LINC00963-214ENST00000622680 ARL6IP6Q8N6S5 226 aa7.16□□□□□ -1.26
LINC00963-214ENST00000622680 C5orf17Q8NAS9 161 aa7.16□□□□□ -1.26
LINC00963-214ENST00000622680 PSMG3Q9BT73 122 aaPredicted RBP7.16□□□□□ -1.26
LINC00963-214ENST00000622680 CHAC1Q9BUX1 264 aa7.16□□□□□ -1.26
LINC00963-214ENST00000622680 PSG8Q9UQ74 426 aa7.16□□□□□ -1.26
LINC00963-214ENST00000622680 A0A1B0GV50 99 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 IGLV2-8P01709 118 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 SERF2P84101 59 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 FLI1Q01543 452 aaPredicted RBP7.15□□□□□ -1.26
LINC00963-214ENST00000622680 LGALSLQ3ZCW2 172 aaPredicted RBP7.15□□□□□ -1.26
LINC00963-214ENST00000622680 SMUG1Q53HV7 270 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 CYB561D1Q8N8Q1 229 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 RAB24Q969Q5 203 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 PTH2Q96A98 100 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 CYTL1Q9NRR1 136 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 KLK12Q9UKR0 248 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 PLA2G2DQ9UNK4 145 aa7.15□□□□□ -1.26
LINC00963-214ENST00000622680 IGKV3D-20A0A0C4DH25 116 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms