RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 GTSF1Q8WW33 167 aa12.94□□□□□ -0.34
PTCHD3-202ENST00000622555 HIST1H2BLQ99880 126 aa12.94□□□□□ -0.34
PTCHD3-202ENST00000622555 GFRA4Q9GZZ7 299 aa12.94□□□□□ -0.34
PTCHD3-202ENST00000622555 ASIPP42127 132 aa12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 DEFB135Q30KP9 77 aa12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 LINC00467Q9BRT7 94 aa12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 TPPP3Q9BW30 176 aa12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 HIGD1CA8MV81 97 aa12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 PRM2P04554 102 aa12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 ZNF705AQ6ZN79 300 aaPredicted RBP12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 FER1L6-AS1Q8NA97 138 aa12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 NUP35Q8NFH5 326 aa12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 NAT8BQ9UHF3 227 aa12.93□□□□□ -0.34
PTCHD3-202ENST00000622555 TRGV11A0A075B6L2 103 aa12.92□□□□□ -0.34
PTCHD3-202ENST00000622555 FAM231BA6NCW3 169 aa12.92□□□□□ -0.34
PTCHD3-202ENST00000622555 SNURFLB1AK76 121 aa12.92□□□□□ -0.34
PTCHD3-202ENST00000622555 PDZD11Q5EBL8 140 aa12.92□□□□□ -0.34
PTCHD3-202ENST00000622555 DEFB121Q5J5C9 76 aa12.92□□□□□ -0.34
PTCHD3-202ENST00000622555 OR10D4PQ8NGN7 298 aa12.92□□□□□ -0.34
PTCHD3-202ENST00000622555 PGLYRP4Q96LB8 373 aa12.92□□□□□ -0.34
PTCHD3-202ENST00000622555 TIMM8BQ9Y5J9 83 aaPredicted RBP12.92□□□□□ -0.34
PTCHD3-202ENST00000622555 H3BVH4 76 aa12.91□□□□□ -0.34
PTCHD3-202ENST00000622555 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
PTCHD3-202ENST00000622555 IGHV3-16A0A0C4DH30 117 aa12.91□□□□□ -0.34
PTCHD3-202ENST00000622555 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
PTCHD3-202ENST00000622555 FABP4P15090 132 aa12.91□□□□□ -0.34
PTCHD3-202ENST00000622555 PYY3Q5JQD4 70 aa12.91□□□□□ -0.34
PTCHD3-202ENST00000622555 DNLZQ5SXM8 178 aa12.91□□□□□ -0.34
PTCHD3-202ENST00000622555 Q6ZWC4 215 aa12.91□□□□□ -0.34
PTCHD3-202ENST00000622555 MDFICQ9P1T7 246 aa12.91□□□□□ -0.34
PTCHD3-202ENST00000622555 A0A1B0GXF2 115 aa12.9□□□□□ -0.34
PTCHD3-202ENST00000622555 HLA-DQA1P01909 254 aa12.9□□□□□ -0.34
PTCHD3-202ENST00000622555 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
PTCHD3-202ENST00000622555 FOXA3P55318 350 aaPredicted RBP12.9□□□□□ -0.34
PTCHD3-202ENST00000622555 Q0VG73 95 aa12.9□□□□□ -0.34
PTCHD3-202ENST00000622555 LYZL1Q6UWQ5 148 aa12.9□□□□□ -0.34
PTCHD3-202ENST00000622555 ATP5L2Q7Z4Y8 100 aa12.9□□□□□ -0.34
PTCHD3-202ENST00000622555 SPINK4O60575 86 aa12.89□□□□□ -0.35
PTCHD3-202ENST00000622555 ESDP10768 282 aa12.89□□□□□ -0.35
PTCHD3-202ENST00000622555 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
PTCHD3-202ENST00000622555 AZU1P20160 251 aa12.89□□□□□ -0.35
PTCHD3-202ENST00000622555 MRPL54Q6P161 138 aaKnown RBP12.89□□□□□ -0.35
PTCHD3-202ENST00000622555 MUC21A0A0G2JKD1 596 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 MUC21A0A140T8X8 626 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 RRN3P1Q2M238 152 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 RNF183Q96D59 192 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 PACRGQ96M98 296 aaPredicted RBP12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 F2Z2F3 143 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 OR5AL1P0C617 328 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 MED14OSP0DP75 135 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 CTRLP40313 264 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 SSTP61278 116 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 ZNF415Q09FC8 603 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 BORCS7Q96B45 105 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 NIT2Q9NQR4 276 aa12.88□□□□□ -0.35
PTCHD3-202ENST00000622555 MUC4Q99102 2169 aa12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 SPRY2O43597 315 aa12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 SNAI2O43623 268 aa12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 S100A12P80511 92 aa12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 OR11H2Q8NH07 326 aa12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 C9orf85Q96MD7 179 aa12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 GSN-AS1Q9NRJ2 163 aa12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 X6R8D5 127 aa12.87□□□□□ -0.35
PTCHD3-202ENST00000622555 NBEAL2Q6ZNJ1 2754 aa12.86□□□□□ -0.35
PTCHD3-202ENST00000622555 NUPR1O60356 82 aa12.86□□□□□ -0.35
PTCHD3-202ENST00000622555 LINC00310P59036 64 aa12.86□□□□□ -0.35
PTCHD3-202ENST00000622555 C11orf72Q8NBR9 251 aa12.86□□□□□ -0.35
PTCHD3-202ENST00000622555 OR10AG1Q8NH19 301 aa12.86□□□□□ -0.35
PTCHD3-202ENST00000622555 MRAPQ8TCY5 172 aa12.86□□□□□ -0.35
PTCHD3-202ENST00000622555 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
PTCHD3-202ENST00000622555 C16orf74Q96GX8 76 aa12.86□□□□□ -0.35
PTCHD3-202ENST00000622555 PHLDA3Q9Y5J5 127 aa12.86□□□□□ -0.35
PTCHD3-202ENST00000622555 A0A1B0GUT8 65 aa12.85□□□□□ -0.35
PTCHD3-202ENST00000622555 SMIM9A6NGZ8 99 aa12.85□□□□□ -0.35
PTCHD3-202ENST00000622555 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
PTCHD3-202ENST00000622555 SCRT2Q9NQ03 307 aa12.85□□□□□ -0.35
PTCHD3-202ENST00000622555 APCSP02743 223 aa12.85□□□□□ -0.35
PTCHD3-202ENST00000622555 SPANXN1Q5VSR9 72 aa12.85□□□□□ -0.35
PTCHD3-202ENST00000622555 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
PTCHD3-202ENST00000622555 SBSPONQ8IVN8 264 aa12.85□□□□□ -0.35
PTCHD3-202ENST00000622555 RETNQ9HD89 108 aa12.85□□□□□ -0.35
PTCHD3-202ENST00000622555 JOSD1Q15040 202 aaPredicted RBP12.84□□□□□ -0.35
PTCHD3-202ENST00000622555 OR10J3Q5JRS4 329 aa12.84□□□□□ -0.35
PTCHD3-202ENST00000622555 OVOL2Q9BRP0 275 aa12.84□□□□□ -0.35
PTCHD3-202ENST00000622555 TP53TG1Q9Y2A0 90 aa12.84□□□□□ -0.35
PTCHD3-202ENST00000622555 M0R381 172 aa12.83□□□□□ -0.36
PTCHD3-202ENST00000622555 CACNG7P62955 275 aa12.83□□□□□ -0.36
PTCHD3-202ENST00000622555 RIGQ13278 110 aa12.83□□□□□ -0.36
PTCHD3-202ENST00000622555 CNFNQ9BYD5 112 aa12.83□□□□□ -0.36
PTCHD3-202ENST00000622555 NTF3P20783 257 aa12.82□□□□□ -0.36
PTCHD3-202ENST00000622555 RAB4BP61018 213 aa12.82□□□□□ -0.36
PTCHD3-202ENST00000622555 SLAQ13239 276 aa12.82□□□□□ -0.36
PTCHD3-202ENST00000622555 TWIST1Q15672 202 aa12.82□□□□□ -0.36
PTCHD3-202ENST00000622555 SPXQ9BT56 116 aa12.82□□□□□ -0.36
PTCHD3-202ENST00000622555 PCP4L1A6NKN8 68 aa12.82□□□□□ -0.36
PTCHD3-202ENST00000622555 EMP1P54849 157 aa12.82□□□□□ -0.36
PTCHD3-202ENST00000622555 HBBP68871 147 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms