RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 SIGLEC15Q6ZMC9 328 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 BAGE2Q86Y30 109 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 FAM24BQ8N5W8 94 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 TMEM75Q8N9X5 138 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 FAM210BQ96KR6 192 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 NOL4LQ96MY1 436 aaPredicted RBP3.44□□□□□ -1.86
VPS29-212ENST00000621131 DERL1Q9BUN8 251 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 OSTCQ9NRP0 149 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 PEF1Q9UBV8 284 aaKnown RBP3.44□□□□□ -1.86
VPS29-212ENST00000621131 SOX21Q9Y651 276 aaPredicted RBP3.44□□□□□ -1.86
VPS29-212ENST00000621131 URGCP-MRPS24S4R325 110 aa3.44□□□□□ -1.86
VPS29-212ENST00000621131 TRBV24-1A0A075B6N3 115 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 IGHV3-35A0A0C4DH35 117 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 TRBV6-1A0A0K0K1D8 114 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 TEX48A0A1B0GUV7 120 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 ZNF320A2RRD8 509 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 XKRY2A2RUG3 117 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 COLCA2A8K830 154 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 H0Y9J4 135 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 ISLRO14498 428 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 GCGP01275 180 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 P01737 135 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 IGHV3-11P01762 117 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 LGALS1P09382 135 aaKnown RBP3.43□□□□□ -1.86
VPS29-212ENST00000621131 IGLC2P0DOY2 106 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 MYCNOSP40205 109 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 ID1P41134 155 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 GNG5P63218 68 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 ELOBQ15370 118 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 PSG3Q16557 428 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 SAPCD1Q5SSQ6 148 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 GOLT1AQ6ZVE7 132 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 FAM231DQ6ZW35 169 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 PRNTQ86SH4 94 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 Q86TA4 180 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 OR4B1Q8NGF8 309 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 OCC1Q8TAD7 63 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 BORCS7Q96B45 105 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 MRPL53Q96EL3 112 aaKnown RBP3.43□□□□□ -1.86
VPS29-212ENST00000621131 IGF2BP2-AS1Q96M15 143 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 SAV1Q9H4B6 383 aaPredicted RBP3.43□□□□□ -1.86
VPS29-212ENST00000621131 ZNF702PQ9H963 129 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 DAZ1Q9NQZ3 744 aaKnown RBP3.43□□□□□ -1.86
VPS29-212ENST00000621131 ZNF586Q9NXT0 402 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 IL36BQ9NZH7 164 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 ZFP30Q9Y2G7 519 aa3.43□□□□□ -1.86
VPS29-212ENST00000621131 TENM3Q9P273 2699 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 TGIF2-C20orf24A0A0A6YYL0 155 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 TRAV34A0A0B4J273 112 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 RBAKDNA6NC62 111 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 A8MWL6 223 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 H3BTX0 84 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 K7EMT4 169 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 LTAP01374 205 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 MT-ND6P03923 174 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 S100A8P05109 93 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 SNRPCP09234 159 aaKnown RBP3.42□□□□□ -1.86
VPS29-212ENST00000621131 PSMB8P28062 276 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 TMEM78Q5T7P6 136 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 Q6AWC8 147 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 C16orf54Q6UWD8 224 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 GPHB5Q86YW7 130 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 TMEM183AQ8IXX5 376 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 Q8N2B8 174 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 EXOC3-AS1Q8N2X6 119 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 OR10J6PQ8NGY7 276 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 UBE2E2Q96LR5 201 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 RPP21Q9H633 154 aaKnown RBP3.42□□□□□ -1.86
VPS29-212ENST00000621131 SRD5A3Q9H8P0 318 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 ZNF492Q9P255 531 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 NAT8BQ9UHF3 227 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 PSG8Q9UQ74 426 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 KLF12Q9Y4X4 402 aa3.42□□□□□ -1.86
VPS29-212ENST00000621131 TRBV20OR9-2A0A075B6H5 130 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 IGHV3OR16-8A0A075B7F1 116 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 IGHV7-4-1A0A0J9YVY3 117 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 LINC01619G3V211 115 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 LGALS9O00182 355 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 SLC17A3O00476 420 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 OVOL1O14753 267 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 MRPS12O15235 138 aaKnown RBP3.41□□□□□ -1.86
VPS29-212ENST00000621131 ZNF207O43670 478 aaKnown RBP3.41□□□□□ -1.86
VPS29-212ENST00000621131 TYMSP04818 313 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 RPS20P60866 119 aaKnown RBP3.41□□□□□ -1.86
VPS29-212ENST00000621131 RAB4BP61018 213 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 SNRPD3P62318 126 aaKnown RBP3.41□□□□□ -1.86
VPS29-212ENST00000621131 PAFAH1B2P68402 229 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 OR5I1Q13606 314 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 SMUG1Q53HV7 270 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 FAM162BQ5T6X4 162 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 NHLRC2Q8NBF2 726 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 ZNF738Q8NE65 137 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 C4orf3Q8WVX3 66 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 FRZBQ92765 325 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 SMR3AQ99954 134 aa3.41□□□□□ -1.86
VPS29-212ENST00000621131 RNASE7Q9H1E1 156 aaKnown RBP3.41□□□□□ -1.86
VPS29-212ENST00000621131 NRN1Q9NPD7 142 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms