RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 HMSDA8MTL9 139 aa17.15■□□□□ 0.34
VEGFA-228ENST00000617771 ASIPP42127 132 aa17.15■□□□□ 0.34
VEGFA-228ENST00000617771 FHITP49789 147 aa17.15■□□□□ 0.34
VEGFA-228ENST00000617771 TIRAPP58753 221 aa17.15■□□□□ 0.34
VEGFA-228ENST00000617771 FMC1Q96HJ9 113 aa17.15■□□□□ 0.34
VEGFA-228ENST00000617771 ZFP30Q9Y2G7 519 aa17.15■□□□□ 0.34
VEGFA-228ENST00000617771 IGHV3-73A0A0B4J1V6 119 aa17.14■□□□□ 0.33
VEGFA-228ENST00000617771 DNAH10OSP0CZ25 163 aa17.14■□□□□ 0.33
VEGFA-228ENST00000617771 UBE2G1P62253 170 aa17.14■□□□□ 0.33
VEGFA-228ENST00000617771 CST9LP1Q5W188 147 aa17.14■□□□□ 0.33
VEGFA-228ENST00000617771 A0A0D9SG52 128 aa17.13■□□□□ 0.33
VEGFA-228ENST00000617771 CDK2AP2O75956 126 aa17.13■□□□□ 0.33
VEGFA-228ENST00000617771 SEC11BP0C7V7 166 aa17.13■□□□□ 0.33
VEGFA-228ENST00000617771 MGST1P10620 155 aaKnown RBP17.13■□□□□ 0.33
VEGFA-228ENST00000617771 PIK3CD-AS1Q5SR53 167 aa17.13■□□□□ 0.33
VEGFA-228ENST00000617771 KANTRA0A1W2PQU2 76 aa17.12■□□□□ 0.33
VEGFA-228ENST00000617771 B4DEV8 164 aa17.12■□□□□ 0.33
VEGFA-228ENST00000617771 UMAD1C9J7I0 102 aa17.12■□□□□ 0.33
VEGFA-228ENST00000617771 EREGO14944 169 aa17.12■□□□□ 0.33
VEGFA-228ENST00000617771 COX8CQ7Z4L0 72 aa17.12■□□□□ 0.33
VEGFA-228ENST00000617771 ZNF471Q9BX82 626 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-228ENST00000617771 A8MWV9 139 aa17.11■□□□□ 0.33
VEGFA-228ENST00000617771 KRTAP10-2P60368 255 aa17.11■□□□□ 0.33
VEGFA-228ENST00000617771 ERVFC1-1P60608 527 aa17.11■□□□□ 0.33
VEGFA-228ENST00000617771 C10orf126Q8N4M7 172 aa17.11■□□□□ 0.33
VEGFA-228ENST00000617771 OR11H4Q8NGC9 324 aa17.11■□□□□ 0.33
VEGFA-228ENST00000617771 ZC2HC1AQ96GY0 325 aa17.11■□□□□ 0.33
VEGFA-228ENST00000617771 IL36BQ9NZH7 164 aa17.11■□□□□ 0.33
VEGFA-228ENST00000617771 MSRB1Q9NZV6 116 aa17.11■□□□□ 0.33
VEGFA-228ENST00000617771 TNFRSF18Q9Y5U5 241 aa17.11■□□□□ 0.33
VEGFA-228ENST00000617771 LRP1BQ9NZR2 4599 aa17.1■□□□□ 0.33
VEGFA-228ENST00000617771 TRBV6-1A0A0K0K1D8 114 aa17.1■□□□□ 0.33
VEGFA-228ENST00000617771 BCL2L11O43521 198 aa17.1■□□□□ 0.33
VEGFA-228ENST00000617771 CRYGDP07320 174 aa17.1■□□□□ 0.33
VEGFA-228ENST00000617771 LGALSLQ3ZCW2 172 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-228ENST00000617771 FAM162BQ5T6X4 162 aa17.1■□□□□ 0.33
VEGFA-228ENST00000617771 FAM213BQ8TBF2 198 aa17.1■□□□□ 0.33
VEGFA-228ENST00000617771 SFT2D1Q8WV19 159 aa17.1■□□□□ 0.33
VEGFA-228ENST00000617771 BOLA1Q9Y3E2 137 aa17.1■□□□□ 0.33
VEGFA-228ENST00000617771 RYR1P21817 5038 aa17.09■□□□□ 0.33
VEGFA-228ENST00000617771 SH2D1AO60880 128 aa17.09■□□□□ 0.33
VEGFA-228ENST00000617771 CRIP1P50238 77 aa17.09■□□□□ 0.33
VEGFA-228ENST00000617771 EIF5AP63241 154 aaKnown RBP17.09■□□□□ 0.33
VEGFA-228ENST00000617771 ZFP2Q6ZN57 461 aa17.09■□□□□ 0.33
VEGFA-228ENST00000617771 PARLQ9H300 379 aa17.09■□□□□ 0.33
VEGFA-228ENST00000617771 TRAV8-6A0A0B4J262 113 aa17.08■□□□□ 0.32
VEGFA-228ENST00000617771 IGHV3-38A0A0C4DH36 116 aa17.08■□□□□ 0.32
VEGFA-228ENST00000617771 KRBOX1C9JBD0 128 aa17.08■□□□□ 0.32
VEGFA-228ENST00000617771 PAGE4O60829 102 aa17.08■□□□□ 0.32
VEGFA-228ENST00000617771 AKR1C3P42330 323 aa17.08■□□□□ 0.32
VEGFA-228ENST00000617771 MBD3L1Q8WWY6 194 aa17.08■□□□□ 0.32
VEGFA-228ENST00000617771 H3BVH4 76 aa17.07■□□□□ 0.32
VEGFA-228ENST00000617771 M0R036 132 aa17.07■□□□□ 0.32
VEGFA-228ENST00000617771 LTAP01374 205 aa17.07■□□□□ 0.32
VEGFA-228ENST00000617771 OR10J3Q5JRS4 329 aa17.07■□□□□ 0.32
VEGFA-228ENST00000617771 DNLZQ5SXM8 178 aa17.07■□□□□ 0.32
VEGFA-228ENST00000617771 SYT8Q8NBV8 401 aa17.07■□□□□ 0.32
VEGFA-228ENST00000617771 ZNF674Q2M3X9 581 aa17.06■□□□□ 0.32
VEGFA-228ENST00000617771 ARMS2P0C7Q2 107 aa17.05■□□□□ 0.32
VEGFA-228ENST00000617771 LINC01556Q5JQF7 62 aa17.05■□□□□ 0.32
VEGFA-228ENST00000617771 ATP6V0E2Q8NHE4 81 aa17.05■□□□□ 0.32
VEGFA-228ENST00000617771 A0A1B0GV50 99 aa17.04■□□□□ 0.32
VEGFA-228ENST00000617771 PFDN1O60925 122 aa17.04■□□□□ 0.32
VEGFA-228ENST00000617771 S100A9P06702 114 aaKnown RBP17.04■□□□□ 0.32
VEGFA-228ENST00000617771 LELP1Q5T871 98 aa17.04■□□□□ 0.32
VEGFA-228ENST00000617771 GTSF1LQ9H1H1 148 aa17.04■□□□□ 0.32
VEGFA-228ENST00000617771 PGPEP1Q9NXJ5 209 aa17.04■□□□□ 0.32
VEGFA-228ENST00000617771 HSPG2P98160 4391 aa17.03■□□□□ 0.32
VEGFA-228ENST00000617771 GRIFINA4D1Z8 144 aa17.03■□□□□ 0.32
VEGFA-228ENST00000617771 H2AFB1P0C5Y9 115 aa17.03■□□□□ 0.32
VEGFA-228ENST00000617771 LINC01559Q495D7 138 aa17.03■□□□□ 0.32
VEGFA-228ENST00000617771 DMRTA1Q5VZB9 504 aa17.03■□□□□ 0.32
VEGFA-228ENST00000617771 PHLDA3Q9Y5J5 127 aa17.03■□□□□ 0.32
VEGFA-228ENST00000617771 RHODO00212 210 aa17.02■□□□□ 0.32
VEGFA-228ENST00000617771 TPT1P13693 172 aaKnown RBP17.02■□□□□ 0.32
VEGFA-228ENST00000617771 Q6ZSN1 163 aa17.02■□□□□ 0.32
VEGFA-228ENST00000617771 TMUB2Q71RG4 321 aa17.02■□□□□ 0.32
VEGFA-228ENST00000617771 JPT2Q9H910 190 aa17.02■□□□□ 0.32
VEGFA-228ENST00000617771 PCLOQ9Y6V0 5065 aa17.01■□□□□ 0.31
VEGFA-228ENST00000617771 A0A087WTM6 91 aa17.01■□□□□ 0.31
VEGFA-228ENST00000617771 TMSB15BA0A087X1C1 80 aa17.01■□□□□ 0.31
VEGFA-228ENST00000617771 UFSP1Q6NVU6 142 aa17.01■□□□□ 0.31
VEGFA-228ENST00000617771 CDPF1Q6NVV7 123 aa17.01■□□□□ 0.31
VEGFA-228ENST00000617771 GAGE12JA6NER3 117 aa17■□□□□ 0.31
VEGFA-228ENST00000617771 GAGE1Q13065 139 aa17■□□□□ 0.31
VEGFA-228ENST00000617771 GAGE4Q13068 117 aa17■□□□□ 0.31
VEGFA-228ENST00000617771 GAGE5Q13069 117 aa17■□□□□ 0.31
VEGFA-228ENST00000617771 GAGE13Q4V321 117 aa17■□□□□ 0.31
VEGFA-228ENST00000617771 MAPKAPK5-AS1Q8N8E1 139 aa17■□□□□ 0.31
VEGFA-228ENST00000617771 SAMD10Q9BYL1 202 aa17■□□□□ 0.31
VEGFA-228ENST00000617771 SCO2A0A1W2PP80 73 aa16.99■□□□□ 0.31
VEGFA-228ENST00000617771 SCRT2Q9NQ03 307 aa16.99■□□□□ 0.31
VEGFA-228ENST00000617771 DNAH5Q8TE73 4624 aa16.99■□□□□ 0.31
VEGFA-228ENST00000617771 IBA57-AS1B1ANH7 110 aa16.98■□□□□ 0.31
VEGFA-228ENST00000617771 ZFP82Q8N141 532 aa16.98■□□□□ 0.31
VEGFA-228ENST00000617771 M0R381 172 aa16.97■□□□□ 0.31
VEGFA-228ENST00000617771 LINC00694P0DN24 101 aa16.97■□□□□ 0.31
VEGFA-228ENST00000617771 FAM74A4Q5TZK3 123 aa16.97■□□□□ 0.31
VEGFA-228ENST00000617771 C14orf178Q8N769 122 aaPredicted RBP16.97■□□□□ 0.31
VEGFA-228ENST00000617771 SFRP2Q96HF1 295 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms