RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 RNASE2P10153 161 aaKnown RBP4.33□□□□□ -1.72
CPNE4-214ENST00000617767 CEMP1Q6PRD7 247 aaPredicted RBP4.33□□□□□ -1.72
CPNE4-214ENST00000617767 DYNAPQ8N1N2 210 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 RNF152Q8N8N0 203 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 PRORYQ9H606 182 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 PRSS46E5RG02 174 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 IGLV2-23P01705 113 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 C8orf88P0DMB2 117 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 HBBP68871 147 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 LOXL1Q08397 574 aaPredicted RBP4.33□□□□□ -1.72
CPNE4-214ENST00000617767 VMA21Q3ZAQ7 101 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 DPH3Q96FX2 82 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 LINC00527Q9UJ94 153 aa4.33□□□□□ -1.72
CPNE4-214ENST00000617767 UBR5O95071 2799 aaPredicted RBP4.32□□□□□ -1.72
CPNE4-214ENST00000617767 TRAV8-4A0A0B4J246 113 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 M0R2P5 195 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
CPNE4-214ENST00000617767 PMVKQ15126 192 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 VMO1Q7Z5L0 202 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 NDUFA4L2Q9NRX3 87 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 TRGV11A0A075B6L2 103 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 A0A0U1RQV1 116 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 A0A1B0GXF2 115 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 LINC01549A6NIU2 74 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 UQCRQO14949 82 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 TCL1BO95988 128 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 ZNF56Q15929 161 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 BRD3OSQ6XYD6 125 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 GTSCR1Q86UQ5 136 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 LINC00526Q96FQ7 95 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 RPL27AP46776 148 aaKnown RBP4.32□□□□□ -1.72
CPNE4-214ENST00000617767 PDPNQ86YL7 162 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 PGLYRP4Q96LB8 373 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 KAAG1Q9UBP8 84 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 HHLA3Q9XRX5 114 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 PYGO1Q9Y3Y4 419 aa4.32□□□□□ -1.72
CPNE4-214ENST00000617767 LOC389332A0A1B0GUA5 103 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 hADV29S1A0JD25 119 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 IGLV1-47P01700 117 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 FBXL19-AS1Q494R0 122 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 C1orf195Q5TG92 126 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 LYRM7Q5U5X0 104 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 NTN5Q8WTR8 489 aaPredicted RBP4.31□□□□□ -1.72
CPNE4-214ENST00000617767 TMEM158Q8WZ71 300 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 C2orf48Q96LS8 159 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 LINC00574Q9H8X3 128 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 COX7A2P2O60397 106 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 MYCNOSP40205 109 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 EFNA4P52798 201 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 LYZP61626 148 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 CD69Q07108 199 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 Q8N1Y9 231 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 MAPKAPK5-AS1Q8N8E1 139 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 SRSF12Q8WXF0 261 aaKnown RBP4.31□□□□□ -1.72
CPNE4-214ENST00000617767 ZNF503Q96F45 646 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 FAM19A4Q96LR4 140 aa4.31□□□□□ -1.72
CPNE4-214ENST00000617767 BBC3Q96PG8 261 aaPredicted RBP4.31□□□□□ -1.72
CPNE4-214ENST00000617767 SLC25A39Q9BZJ4 359 aaPredicted RBP4.31□□□□□ -1.72
CPNE4-214ENST00000617767 IGHV3OR16-13A0A075B7E8 117 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 A0A096LNJ9 63 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 IGHV3-74A0A0B4J1X5 117 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 OVOL1O14753 267 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 UBE2L3P68036 154 aaKnown RBP4.3□□□□□ -1.72
CPNE4-214ENST00000617767 C11orf71Q6IPW1 123 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 ZNF785A8K8V0 405 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 NBR2O15453 112 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 ECSCRQ19T08 205 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 MRGPRG-AS1Q2M3A8 158 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 ATP5L2Q7Z4Y8 100 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 TMEM167AQ8TBQ9 72 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 IGF2BP2-AS1Q96M15 143 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 CYSTM1Q9H1C7 97 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 JMJD1CQ15652 2540 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 MYMXA0A1B0GTQ4 84 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 SLC25A20O43772 301 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 PFN2P35080 140 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 IFI27P40305 119 aaPredicted RBP4.3□□□□□ -1.72
CPNE4-214ENST00000617767 LINC00305Q7Z4B0 112 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 SBSPONQ8IVN8 264 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 IFI27L1Q96BM0 104 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 DPM3Q9P2X0 92 aa4.3□□□□□ -1.72
CPNE4-214ENST00000617767 FLNBO75369 2602 aaKnown RBP4.29□□□□□ -1.72
CPNE4-214ENST00000617767 LY6EQ16553 131 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 IGHV3-49A0A0A0MS15 119 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 IGHV3-66A0A0C4DH42 116 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 TEX49A0A1B0GTD5 131 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 MPDU1O75352 247 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 IGHV4-39P01824 125 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 NDPQ00604 133 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 C2orf83Q53S99 150 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 C10orf113Q5VZT2 155 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 HIST2H2BCQ6DN03 193 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 Q71RC1 249 aaPredicted RBP4.29□□□□□ -1.72
CPNE4-214ENST00000617767 AMN1Q8IY45 258 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 C10orf105Q8TEF2 133 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 AAMDCQ9H7C9 122 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 RETNQ9HD89 108 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 J3QQQ9 107 aa4.29□□□□□ -1.72
CPNE4-214ENST00000617767 TRACP01848 142 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms