RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ZFP30Q9Y2G7 519 aa6.56□□□□□ -1.36
TARDBP-218ENST00000617172 TNFRSF18Q9Y5U5 241 aa6.56□□□□□ -1.36
TARDBP-218ENST00000617172 DNAH11Q96DT5 4516 aa6.56□□□□□ -1.36
TARDBP-218ENST00000617172 A0A087WTM6 91 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 TRAV34A0A0B4J273 112 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 PGPEP1LA6NFU8 196 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 FAM74A7A6NL05 159 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 A8MWV9 139 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
TARDBP-218ENST00000617172 ASIPP42127 132 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 ZNF726P1Q15940 193 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 LINC01556Q5JQF7 62 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 ZNF506Q5JVG8 444 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 STOML3Q8TAV4 291 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 LINC00479Q96M42 142 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 IL36BQ9NZH7 164 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 ARL2-SNX15V9GYD0 113 aa6.55□□□□□ -1.36
TARDBP-218ENST00000617172 PEX7O00628 323 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 ARPC5O15511 151 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 FHITP49789 147 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 UBE2G2P60604 165 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 OR10J3Q5JRS4 329 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 LELP1Q5T871 98 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 DPPA3Q6W0C5 159 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 COX8CQ7Z4L0 72 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 ATP6V0E2Q8NHE4 81 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 FMC1Q96HJ9 113 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 GTSF1LQ9H1H1 148 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 SCRT2Q9NQ03 307 aa6.54□□□□□ -1.36
TARDBP-218ENST00000617172 PCLOQ9Y6V0 5065 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 IGHV3-73A0A0B4J1V6 119 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 IGKV3D-20A0A0C4DH25 116 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 MAP1LC3B2A6NCE7 125 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 IBA57-AS1B1ANH7 110 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 PSCAO43653 123 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 FGF8P55075 233 aaPredicted RBP6.53□□□□□ -1.36
TARDBP-218ENST00000617172 UBE2G1P62253 170 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 LGALSLQ3ZCW2 172 aaPredicted RBP6.53□□□□□ -1.36
TARDBP-218ENST00000617172 DNLZQ5SXM8 178 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 FAM162BQ5T6X4 162 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 SYT8Q8NBV8 401 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 MAP1LC3BQ9GZQ8 125 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 CYTL1Q9NRR1 136 aa6.53□□□□□ -1.36
TARDBP-218ENST00000617172 A0A087WWC5 75 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 TRBV6-1A0A0K0K1D8 114 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 B4DEV8 164 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 UMAD1C9J7I0 102 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 G3V3Q6 166 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 RHODO00212 210 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 ZNF345Q14585 488 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 CST9LP1Q5W188 147 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 Q86TA4 180 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 PARLQ9H300 379 aa6.52□□□□□ -1.37
TARDBP-218ENST00000617172 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
TARDBP-218ENST00000617172 KRBOX1C9JBD0 128 aa6.51□□□□□ -1.37
TARDBP-218ENST00000617172 J3QL48 77 aa6.51□□□□□ -1.37
TARDBP-218ENST00000617172 S100A9P06702 114 aaKnown RBP6.51□□□□□ -1.37
TARDBP-218ENST00000617172 SEC11BP0C7V7 166 aa6.51□□□□□ -1.37
TARDBP-218ENST00000617172 CRIP1P50238 77 aa6.51□□□□□ -1.37
TARDBP-218ENST00000617172 LAGE3Q14657 143 aa6.51□□□□□ -1.37
TARDBP-218ENST00000617172 KCNRGQ8N5I3 272 aa6.51□□□□□ -1.37
TARDBP-218ENST00000617172 ZC2HC1AQ96GY0 325 aa6.51□□□□□ -1.37
TARDBP-218ENST00000617172 TM2D2Q9BX73 214 aa6.51□□□□□ -1.37
TARDBP-218ENST00000617172 A0A0D9SG52 128 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 HMSDA8MTL9 139 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 SH2D1AO60880 128 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 LTAP01374 205 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 ARMS2P0C7Q2 107 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 EIF5AP63241 154 aaKnown RBP6.5□□□□□ -1.37
TARDBP-218ENST00000617172 ZNF674Q2M3X9 581 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 Q6ZSN1 163 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 OR11H4Q8NGC9 324 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 NTN5Q8WTR8 489 aaPredicted RBP6.5□□□□□ -1.37
TARDBP-218ENST00000617172 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 RYR1P21817 5038 aa6.5□□□□□ -1.37
TARDBP-218ENST00000617172 TRAV8-3A0A0A6YYJ7 113 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 H3BVH4 76 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 M0R036 132 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 PAGE4O60829 102 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 TPT1P13693 172 aaKnown RBP6.49□□□□□ -1.37
TARDBP-218ENST00000617172 GCSHP23434 173 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 AKR1C3P42330 323 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 GAGE1Q13065 139 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 GAGE4Q13068 117 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 GAGE5Q13069 117 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 GAGE13Q4V321 117 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 TOR2AQ5JU69 321 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 UFSP1Q6NVU6 142 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 SFT2D1Q8WV19 159 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 MBD3L1Q8WWY6 194 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 SFRP2Q96HF1 295 aa6.49□□□□□ -1.37
TARDBP-218ENST00000617172 KANTRA0A1W2PQU2 76 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 LRCOL1A6NCL2 159 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 EPM2AB3EWF7 344 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 IGHV3-30P01768 117 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 IGHV3-33P01772 117 aa6.48□□□□□ -1.37
TARDBP-218ENST00000617172 LINC00694P0DN24 101 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms