RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 ZMAT4Q9H898 229 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 DKK4Q9UBT3 224 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 ANKHD1Q8IWZ3 2542 aaKnown RBP12.06□□□□□ -0.48
SYNRG-223ENST00000616179 M0R2P5 195 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 GNRH2O43555 120 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 MUSTN1Q8IVN3 82 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 IGHV3-11P01762 117 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 EDA2RQ9HAV5 297 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 FHL3Q13643 280 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 LINC01620Q4KN68 170 aa12.06□□□□□ -0.48
SYNRG-223ENST00000616179 IGHV3OR16-10A0A075B7F0 116 aa12.05□□□□□ -0.48
SYNRG-223ENST00000616179 DGAT2L7PQ6IED9 249 aa12.05□□□□□ -0.48
SYNRG-223ENST00000616179 AJUBAQ96IF1 538 aa12.05□□□□□ -0.48
SYNRG-223ENST00000616179 LINC01560Q8TB33 94 aa12.05□□□□□ -0.48
SYNRG-223ENST00000616179 OPRPNQ99935 248 aaPredicted RBP12.05□□□□□ -0.48
SYNRG-223ENST00000616179 SPRY4Q9C004 299 aa12.04□□□□□ -0.48
SYNRG-223ENST00000616179 RNASE13Q5GAN3 156 aaKnown RBP12.04□□□□□ -0.48
SYNRG-223ENST00000616179 C11orf21Q9P2W6 132 aa12.04□□□□□ -0.48
SYNRG-223ENST00000616179 CEP192Q8TEP8 1941 aa12.04□□□□□ -0.48
SYNRG-223ENST00000616179 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
SYNRG-223ENST00000616179 F6UB75 175 aa12.04□□□□□ -0.48
SYNRG-223ENST00000616179 PIFOQ8TCI5 191 aa12.04□□□□□ -0.48
SYNRG-223ENST00000616179 IGHV3-73A0A0B4J1V6 119 aa12.03□□□□□ -0.48
SYNRG-223ENST00000616179 PPP1R17O96001 155 aa12.03□□□□□ -0.48
SYNRG-223ENST00000616179 GATD1Q8NB37 220 aa12.03□□□□□ -0.48
SYNRG-223ENST00000616179 RASL10AQ92737 203 aa12.03□□□□□ -0.48
SYNRG-223ENST00000616179 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
SYNRG-223ENST00000616179 TRAV12-1A0A0B4J245 112 aa12.03□□□□□ -0.48
SYNRG-223ENST00000616179 G3V318 75 aa12.03□□□□□ -0.48
SYNRG-223ENST00000616179 A0A0J9YY99 117 aa12.02□□□□□ -0.48
SYNRG-223ENST00000616179 FAM236AA0A1B0GUQ0 79 aa12.02□□□□□ -0.48
SYNRG-223ENST00000616179 FAM236BA0A1B0GV22 79 aa12.02□□□□□ -0.48
SYNRG-223ENST00000616179 RBAKDNA6NC62 111 aa12.02□□□□□ -0.48
SYNRG-223ENST00000616179 MBD3L4A6NDZ8 208 aaPredicted RBP12.02□□□□□ -0.48
SYNRG-223ENST00000616179 MBD3L3A6NE82 208 aaPredicted RBP12.02□□□□□ -0.48
SYNRG-223ENST00000616179 MBD3L5A6NJ08 208 aaPredicted RBP12.02□□□□□ -0.48
SYNRG-223ENST00000616179 IGF1P05019 195 aa12.02□□□□□ -0.48
SYNRG-223ENST00000616179 CTSGP08311 255 aa12.02□□□□□ -0.48
SYNRG-223ENST00000616179 MBD3L2Q8NHZ7 208 aaPredicted RBP12.02□□□□□ -0.48
SYNRG-223ENST00000616179 LINC00477Q96M19 166 aa12.02□□□□□ -0.48
SYNRG-223ENST00000616179 YAE1D1Q9NRH1 226 aa12.02□□□□□ -0.48
SYNRG-223ENST00000616179 SDHAF1A6NFY7 115 aa12.02□□□□□ -0.49
SYNRG-223ENST00000616179 SEM1Q6ZVN7 128 aa12.02□□□□□ -0.49
SYNRG-223ENST00000616179 TOMM6Q96B49 74 aa12.02□□□□□ -0.49
SYNRG-223ENST00000616179 LINC00574Q9H8X3 128 aa12.02□□□□□ -0.49
SYNRG-223ENST00000616179 TNRC6BQ9UPQ9 1833 aaKnown RBP12.02□□□□□ -0.49
SYNRG-223ENST00000616179 NEXN-AS1Q8NBZ9 246 aa12.02□□□□□ -0.49
SYNRG-223ENST00000616179 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
SYNRG-223ENST00000616179 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
SYNRG-223ENST00000616179 DUX5Q96PT3 197 aa12.01□□□□□ -0.49
SYNRG-223ENST00000616179 RHODO00212 210 aa12.01□□□□□ -0.49
SYNRG-223ENST00000616179 VCYO14598 125 aa12.01□□□□□ -0.49
SYNRG-223ENST00000616179 NRACQ8N912 160 aa12.01□□□□□ -0.49
SYNRG-223ENST00000616179 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
SYNRG-223ENST00000616179 HOXB4P17483 251 aaPredicted RBP12.01□□□□□ -0.49
SYNRG-223ENST00000616179 FANCD2OSQ96PS1 177 aa12□□□□□ -0.49
SYNRG-223ENST00000616179 JPT2Q9H910 190 aa12□□□□□ -0.49
SYNRG-223ENST00000616179 FAM215AQ9Y5M1 114 aa12□□□□□ -0.49
SYNRG-223ENST00000616179 CD28P10747 220 aa11.99□□□□□ -0.49
SYNRG-223ENST00000616179 ZNF876PQ49A33 203 aa11.99□□□□□ -0.49
SYNRG-223ENST00000616179 SMAD5-AS1Q9Y6J3 95 aa11.99□□□□□ -0.49
SYNRG-223ENST00000616179 PF4V1P10720 104 aa11.98□□□□□ -0.49
SYNRG-223ENST00000616179 ID1P41134 155 aa11.98□□□□□ -0.49
SYNRG-223ENST00000616179 MRPS12O15235 138 aaKnown RBP11.98□□□□□ -0.49
SYNRG-223ENST00000616179 IGLV1-47P01700 117 aa11.98□□□□□ -0.49
SYNRG-223ENST00000616179 DAND5Q8N907 189 aa11.98□□□□□ -0.49
SYNRG-223ENST00000616179 A0A0J9YXV3 536 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 TMEM219Q86XT9 240 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 IGLV11-55A0A075B6I3 123 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 PAX8Q06710 450 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 RNF5Q99942 180 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 E7EQL1 145 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 CD59P13987 128 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 UBE2D1P51668 147 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 TMEM190Q8WZ59 177 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 TIMM21Q9BVV7 248 aa11.97□□□□□ -0.49
SYNRG-223ENST00000616179 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.96□□□□□ -0.49
SYNRG-223ENST00000616179 BUB3O43684 328 aa11.96□□□□□ -0.49
SYNRG-223ENST00000616179 NUP37Q8NFH4 326 aa11.96□□□□□ -0.49
SYNRG-223ENST00000616179 TRGV11A0A075B6L2 103 aa11.96□□□□□ -0.5
SYNRG-223ENST00000616179 DCHS1Q96JQ0 3298 aa11.96□□□□□ -0.5
SYNRG-223ENST00000616179 UBE2D3P61077 147 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 UBE2D2P62837 147 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 LY6EQ16553 131 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 GAGE2AQ6NT46 116 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 B9A039 149 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 ATP6V0E1O15342 81 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 CRYGBP07316 175 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 MRGPRG-AS1Q2M3A8 158 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 ZFHX2Q9C0A1 2572 aaPredicted RBP11.95□□□□□ -0.5
SYNRG-223ENST00000616179 A0A0G2JNJ9 132 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 IGHV3-30P01768 117 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 IGHV3-30-5P0DP03 117 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 ZNF672Q499Z4 452 aaPredicted RBP11.95□□□□□ -0.5
SYNRG-223ENST00000616179 VMO1Q7Z5L0 202 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 SLC25A29Q8N8R3 303 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 Q9UFV3 132 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 BDP1A6H8Y1 2624 aa11.95□□□□□ -0.5
SYNRG-223ENST00000616179 CSPG4Q6UVK1 2322 aa11.94□□□□□ -0.5
SYNRG-223ENST00000616179 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms