RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PLEKHB2Q96CS7 222 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 DEFB118Q96PH6 123 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 DUX3Q96PT4 197 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 METTL26Q96S19 204 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 AGPAT4-IT1Q9H0P7 198 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 MSRB1Q9NZV6 116 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 PEMTQ9UBM1 199 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 DNAJC13O75165 2243 aa3.07□□□□□ -1.92
HMGB1P50-201ENST00000605814 TMSB15BA0A087X1C1 80 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 LOC107984640A0A0U1RRK4 108 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 TEX49A0A1B0GTD5 131 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 TMEM223A0PJW6 202 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 PINLYPA6NC86 204 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGIPA6NJ69 53 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 OOSP1A8MZH6 123 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 LEPROTO15243 131 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 TIMM8AO60220 97 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 GAS8-AS1O95177 125 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 TRACP01848 142 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 GATA1P15976 413 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGHV1-2P23083 117 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 ZNF80P51504 273 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 CCL8P80075 99 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 KLK9Q2XQG4 91 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 TMEM155Q4W5P6 130 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 DAND5Q8N907 189 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 ZNRF1Q8ND25 227 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 KIR2DL5BQ8NHK3 375 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 DCANP1Q8TF63 244 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 MRPL53Q96EL3 112 aaKnown RBP3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 C17orf77Q96MU5 243 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 TIMM17AQ99595 171 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 VKORC1Q9BQB6 163 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 UBTD1Q9HAC8 227 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 KLK9Q9UKQ9 250 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 LENEPQ9Y5L5 61 aa3.06□□□□□ -1.92
HMGB1P50-201ENST00000605814 ARFGEF3Q5TH69 2177 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGLV4-69A0A075B6H9 119 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGHV7-4-1A0A0J9YVY3 117 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 A0A0J9YXY3 114 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 FAM236AA0A1B0GUQ0 79 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 FAM236BA0A1B0GV22 79 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 TEX22C9J3V5 150 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 J3QQQ9 107 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 LST1O00453 97 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 ZNHIT1O43257 154 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 BCE1O60756 84 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 TIMM17BO60830 172 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 TFF1P04155 84 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 PSMB8P28062 276 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 MAGEA5P43359 124 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 LYZP61626 148 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 SUMO2P61956 95 aaKnown RBP3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 Q0VFX4 171 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 ZNF876PQ49A33 203 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 C2orf66Q6UXQ4 117 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 Q6ZT83 130 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 MUSTN1Q8IVN3 82 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 KLHL30-AS1Q8NEE0 82 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 LEAP2Q969E1 77 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 RNF125Q96EQ8 232 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 GAFA1Q96PS6 74 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 UPK3BQ9BT76 320 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 DYNLRB1Q9NP97 96 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 CTSZQ9UBR2 303 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 PRO0628Q9UI54 55 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 NAV3Q8IVL0 2385 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 SVILO95425 2214 aa3.05□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGLV3-9A0A075B6K5 115 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGKV3D-20A0A0C4DH25 116 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 LY6G6EA0A0G2JKS1 128 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 B9A039 149 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 H3BTX0 84 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 K7EIM0 57 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 M0R3E3 92 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 NTN3O00634 580 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 NBR2O15453 112 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 CCL5P13501 91 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 ZNF22P17026 224 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 POLR2KP53803 58 aaKnown RBP3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 HES3Q5TGS1 186 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 FAM222AQ5U5X8 452 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 Q5XG85 94 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 CEMP1Q6PRD7 247 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 DUX4L9Q6RFH8 374 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 GPHB5Q86YW7 130 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 SERP2Q8N6R1 65 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 ZNF256Q9Y2P7 627 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 U3KQA8 63 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 ABCA1O95477 2261 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 MALRD1Q5VYJ5 2156 aa3.04□□□□□ -1.92
HMGB1P50-201ENST00000605814 TRBV7-1A0A0A6YYK4 115 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 TRBV6-5A0A0K0K1A5 114 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 VCYO14598 125 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 NDUFC2O95298 119 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 TSHBP01222 138 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGHV1-69P01742 117 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 IGHV3-48P01763 117 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms