RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ZNF493Q6ZR52 646 aa13.13□□□□□ -0.31
VRK3-225ENST00000601912 SMIM15Q7Z3B0 74 aa13.13□□□□□ -0.31
VRK3-225ENST00000601912 LURAP1LQ8IV03 231 aa13.13□□□□□ -0.31
VRK3-225ENST00000601912 LOC102724200A0A096LPH7 203 aaPredicted RBP13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST1H2BKO60814 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST1H2BJP06899 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 GIG44P09565 113 aaPredicted RBP13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST1H2BOP23527 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST1H2BBP33778 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST1H2BDP58876 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST1H2BCP62807 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 SLAQ13239 276 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST2H2BEQ16778 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.12□□□□□ -0.31
VRK3-225ENST00000601912 C1orf158Q8N1D5 194 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST1H2BHQ93079 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST1H2BNQ99877 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 HIST1H2BMQ99879 126 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 MSRB1Q9NZV6 116 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 IGHV3OR16-12A0A075B7B8 117 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 M0R381 172 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 S100A6P06703 90 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 C9orf85Q96MD7 179 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 TMEM191AQ9H0A3 160 aa13.12□□□□□ -0.31
VRK3-225ENST00000601912 ZNF415Q09FC8 603 aa13.1□□□□□ -0.31
VRK3-225ENST00000601912 KIAA1644Q3SXP7 199 aa13.1□□□□□ -0.31
VRK3-225ENST00000601912 KIR2DL5BA0A0G2JN68 375 aa13.09□□□□□ -0.31
VRK3-225ENST00000601912 KIR2DL5BA0A0G2JPC4 375 aa13.09□□□□□ -0.31
VRK3-225ENST00000601912 APOC4P55056 127 aa13.09□□□□□ -0.31
VRK3-225ENST00000601912 KRTAP10-11P60412 298 aa13.09□□□□□ -0.31
VRK3-225ENST00000601912 KIR2DL5AQ8N109 375 aa13.09□□□□□ -0.31
VRK3-225ENST00000601912 SYT8Q8NBV8 401 aa13.09□□□□□ -0.31
VRK3-225ENST00000601912 KIR2DL5BQ8NHK3 375 aa13.09□□□□□ -0.31
VRK3-225ENST00000601912 SPRY2O43597 315 aa13.08□□□□□ -0.31
VRK3-225ENST00000601912 FAM104BQ5XKR9 115 aa13.08□□□□□ -0.31
VRK3-225ENST00000601912 CSNK1G2-AS1Q8NCQ2 148 aa13.08□□□□□ -0.31
VRK3-225ENST00000601912 NXPH4O95158 308 aa13.08□□□□□ -0.32
VRK3-225ENST00000601912 DMRTA1Q5VZB9 504 aa13.08□□□□□ -0.32
VRK3-225ENST00000601912 G3V4G9 280 aa13.07□□□□□ -0.32
VRK3-225ENST00000601912 PRM2P04554 102 aa13.07□□□□□ -0.32
VRK3-225ENST00000601912 EVI2AP22794 236 aa13.07□□□□□ -0.32
VRK3-225ENST00000601912 NDUFA6P56556 154 aa13.07□□□□□ -0.32
VRK3-225ENST00000601912 AMN1Q8IY45 258 aa13.07□□□□□ -0.32
VRK3-225ENST00000601912 AP1S3Q96PC3 154 aa13.07□□□□□ -0.32
VRK3-225ENST00000601912 IGHV4-30-4P0DP06 118 aa13.06□□□□□ -0.32
VRK3-225ENST00000601912 SRIP30626 198 aa13.06□□□□□ -0.32
VRK3-225ENST00000601912 SAMD5Q5TGI4 173 aa13.06□□□□□ -0.32
VRK3-225ENST00000601912 RCHY1Q96PM5 261 aa13.06□□□□□ -0.32
VRK3-225ENST00000601912 SPXQ9BT56 116 aa13.06□□□□□ -0.32
VRK3-225ENST00000601912 GSN-AS1Q9NRJ2 163 aa13.06□□□□□ -0.32
VRK3-225ENST00000601912 RIPPLY3P57055 190 aa13.05□□□□□ -0.32
VRK3-225ENST00000601912 ZNF705AQ6ZN79 300 aaPredicted RBP13.05□□□□□ -0.32
VRK3-225ENST00000601912 M0R2P5 195 aa13.05□□□□□ -0.32
VRK3-225ENST00000601912 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
VRK3-225ENST00000601912 C11orf72Q8NBR9 251 aa13.05□□□□□ -0.32
VRK3-225ENST00000601912 TMEM263Q8WUH6 116 aaKnown RBP13.05□□□□□ -0.32
VRK3-225ENST00000601912 MUC4Q99102 2169 aa13.04□□□□□ -0.32
VRK3-225ENST00000601912 SMIM17P0DL12 118 aa13.04□□□□□ -0.32
VRK3-225ENST00000601912 AZU1P20160 251 aa13.04□□□□□ -0.32
VRK3-225ENST00000601912 RAB4AP20338 218 aa13.04□□□□□ -0.32
VRK3-225ENST00000601912 RRN3P1Q2M238 152 aa13.04□□□□□ -0.32
VRK3-225ENST00000601912 ALKBH7Q9BT30 221 aaPredicted RBP13.04□□□□□ -0.32
VRK3-225ENST00000601912 DPH3P1Q9H4G8 78 aa13.04□□□□□ -0.32
VRK3-225ENST00000601912 UBE2CO00762 179 aa13.03□□□□□ -0.32
VRK3-225ENST00000601912 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
VRK3-225ENST00000601912 C14orf178Q8N769 122 aaPredicted RBP13.03□□□□□ -0.32
VRK3-225ENST00000601912 RNASE8Q8TDE3 154 aaKnown RBP13.03□□□□□ -0.32
VRK3-225ENST00000601912 C16orf74Q96GX8 76 aa13.03□□□□□ -0.32
VRK3-225ENST00000601912 OR10J3Q5JRS4 329 aa13.02□□□□□ -0.32
VRK3-225ENST00000601912 PIK3CD-AS1Q5SR53 167 aa13.02□□□□□ -0.32
VRK3-225ENST00000601912 ORMDL3Q8N138 153 aa13.02□□□□□ -0.32
VRK3-225ENST00000601912 PTH2Q96A98 100 aa13.02□□□□□ -0.32
VRK3-225ENST00000601912 RNF185Q96GF1 192 aa13.02□□□□□ -0.32
VRK3-225ENST00000601912 PPBPP02775 128 aa13.02□□□□□ -0.33
VRK3-225ENST00000601912 CKS2P33552 79 aa13.02□□□□□ -0.33
VRK3-225ENST00000601912 SNRPEP62304 92 aaKnown RBP13.02□□□□□ -0.33
VRK3-225ENST00000601912 Q0VG73 95 aa13.02□□□□□ -0.33
VRK3-225ENST00000601912 ANK2Q01484 3957 aa13.01□□□□□ -0.33
VRK3-225ENST00000601912 PKD1L1Q8TDX9 2849 aa13.01□□□□□ -0.33
VRK3-225ENST00000601912 A8MZ25 164 aa13.01□□□□□ -0.33
VRK3-225ENST00000601912 D6R8Y8 96 aa13.01□□□□□ -0.33
VRK3-225ENST00000601912 BAGE3Q86Y29 109 aa13.01□□□□□ -0.33
VRK3-225ENST00000601912 C5orf52A6NGY3 159 aa13□□□□□ -0.33
VRK3-225ENST00000601912 SMIM9A6NGZ8 99 aa13□□□□□ -0.33
VRK3-225ENST00000601912 COA6Q5JTJ3 125 aaKnown RBP13□□□□□ -0.33
VRK3-225ENST00000601912 U3KQK5 164 aa13□□□□□ -0.33
VRK3-225ENST00000601912 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
VRK3-225ENST00000601912 PRELID3AQ96N28 172 aa12.99□□□□□ -0.33
VRK3-225ENST00000601912 NDUFAF3Q9BU61 184 aa12.99□□□□□ -0.33
VRK3-225ENST00000601912 MGPP08493 103 aa12.99□□□□□ -0.33
VRK3-225ENST00000601912 IL17DQ8TAD2 202 aa12.99□□□□□ -0.33
VRK3-225ENST00000601912 MRAP2Q96G30 205 aa12.99□□□□□ -0.33
VRK3-225ENST00000601912 JPT2Q9H910 190 aa12.99□□□□□ -0.33
VRK3-225ENST00000601912 A0A087WWL8 130 aa12.98□□□□□ -0.33
VRK3-225ENST00000601912 A8MWV9 139 aa12.98□□□□□ -0.33
VRK3-225ENST00000601912 DAZ2Q13117 558 aaKnown RBP12.98□□□□□ -0.33
VRK3-225ENST00000601912 DEFB135Q30KP9 77 aa12.98□□□□□ -0.33
VRK3-225ENST00000601912 RASL10AQ92737 203 aa12.98□□□□□ -0.33
VRK3-225ENST00000601912 LAMTOR2Q9Y2Q5 125 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms