RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TEX261Q6UWH6 196 aa13.96□□□□□ -0.17
SSBP4-210ENST00000601444 OR4C5Q8NGB2 326 aa13.96□□□□□ -0.17
SSBP4-210ENST00000601444 HHLA3Q9XRX5 114 aa13.96□□□□□ -0.17
SSBP4-210ENST00000601444 TRGV4A0A0C4DH28 118 aa13.95□□□□□ -0.18
SSBP4-210ENST00000601444 ARMS2P0C7Q2 107 aa13.95□□□□□ -0.18
SSBP4-210ENST00000601444 CRYBA4P53673 196 aa13.95□□□□□ -0.18
SSBP4-210ENST00000601444 DNLZQ5SXM8 178 aa13.95□□□□□ -0.18
SSBP4-210ENST00000601444 UBE2DNLQ8IWF7 75 aa13.95□□□□□ -0.18
SSBP4-210ENST00000601444 IL36BQ9NZH7 164 aa13.95□□□□□ -0.18
SSBP4-210ENST00000601444 H3BNG1 76 aa13.94□□□□□ -0.18
SSBP4-210ENST00000601444 PAX4O43316 350 aa13.94□□□□□ -0.18
SSBP4-210ENST00000601444 MGST1P10620 155 aaKnown RBP13.94□□□□□ -0.18
SSBP4-210ENST00000601444 GNG4P50150 75 aa13.94□□□□□ -0.18
SSBP4-210ENST00000601444 CFAP126Q5VTH2 177 aa13.94□□□□□ -0.18
SSBP4-210ENST00000601444 MUC4Q99102 2169 aa13.94□□□□□ -0.18
SSBP4-210ENST00000601444 PRO0255Q9UI72 69 aa13.94□□□□□ -0.18
SSBP4-210ENST00000601444 A0A096LPF7 62 aa13.93□□□□□ -0.18
SSBP4-210ENST00000601444 TOR2AQ5JU69 321 aa13.93□□□□□ -0.18
SSBP4-210ENST00000601444 PTH2Q96A98 100 aa13.93□□□□□ -0.18
SSBP4-210ENST00000601444 IGHV3-73A0A0B4J1V6 119 aa13.92□□□□□ -0.18
SSBP4-210ENST00000601444 RS1O15537 224 aa13.92□□□□□ -0.18
SSBP4-210ENST00000601444 RNF212Q495C1 297 aa13.92□□□□□ -0.18
SSBP4-210ENST00000601444 DMRTA1Q5VZB9 504 aa13.92□□□□□ -0.18
SSBP4-210ENST00000601444 JPT2Q9H910 190 aa13.92□□□□□ -0.18
SSBP4-210ENST00000601444 LINC00588Q9Y4M8 146 aa13.92□□□□□ -0.18
SSBP4-210ENST00000601444 DNAH6Q9C0G6 4158 aa13.92□□□□□ -0.18
SSBP4-210ENST00000601444 SLAQ13239 276 aa13.91□□□□□ -0.18
SSBP4-210ENST00000601444 FAM210AQ96ND0 272 aa13.91□□□□□ -0.18
SSBP4-210ENST00000601444 EIF5A2Q9GZV4 153 aaKnown RBP13.91□□□□□ -0.18
SSBP4-210ENST00000601444 SCRT2Q9NQ03 307 aa13.91□□□□□ -0.18
SSBP4-210ENST00000601444 ESRGQ1W209 222 aa13.9□□□□□ -0.18
SSBP4-210ENST00000601444 PARLQ9H300 379 aa13.9□□□□□ -0.18
SSBP4-210ENST00000601444 IGLV2-18A0A075B6J9 118 aa13.89□□□□□ -0.19
SSBP4-210ENST00000601444 C19orf71A6NCJ1 209 aa13.89□□□□□ -0.19
SSBP4-210ENST00000601444 CEBPGP53567 150 aa13.89□□□□□ -0.19
SSBP4-210ENST00000601444 CCL18P55774 89 aa13.89□□□□□ -0.19
SSBP4-210ENST00000601444 SMIM12Q96EX1 92 aa13.89□□□□□ -0.19
SSBP4-210ENST00000601444 SAMD10Q9BYL1 202 aa13.89□□□□□ -0.19
SSBP4-210ENST00000601444 LOC100131303A0A0U1RQF7 123 aa13.88□□□□□ -0.19
SSBP4-210ENST00000601444 TMEM250H0YL14 139 aa13.88□□□□□ -0.19
SSBP4-210ENST00000601444 M0R2N4 97 aa13.88□□□□□ -0.19
SSBP4-210ENST00000601444 GATA1P15976 413 aaPredicted RBP13.88□□□□□ -0.19
SSBP4-210ENST00000601444 OCC1Q8TAD7 63 aa13.88□□□□□ -0.19
SSBP4-210ENST00000601444 PHLDA3Q9Y5J5 127 aa13.88□□□□□ -0.19
SSBP4-210ENST00000601444 ICOSQ9Y6W8 199 aa13.88□□□□□ -0.19
SSBP4-210ENST00000601444 K7EN84 100 aa13.87□□□□□ -0.19
SSBP4-210ENST00000601444 K7EQD1 137 aa13.87□□□□□ -0.19
SSBP4-210ENST00000601444 M0R381 172 aa13.87□□□□□ -0.19
SSBP4-210ENST00000601444 GZMBP10144 247 aa13.87□□□□□ -0.19
SSBP4-210ENST00000601444 GYPEP15421 78 aa13.87□□□□□ -0.19
SSBP4-210ENST00000601444 Q6ZSN1 163 aa13.87□□□□□ -0.19
SSBP4-210ENST00000601444 DAZAP1Q96EP5 407 aaKnown RBP13.87□□□□□ -0.19
SSBP4-210ENST00000601444 NACAE9PAV3 2078 aa13.86□□□□□ -0.19
SSBP4-210ENST00000601444 MUC21A0A0G2JKD1 596 aa13.86□□□□□ -0.19
SSBP4-210ENST00000601444 MUC21A0A140T8X8 626 aa13.86□□□□□ -0.19
SSBP4-210ENST00000601444 PIK3CD-AS1Q5SR53 167 aa13.86□□□□□ -0.19
SSBP4-210ENST00000601444 SLC25A29Q8N8R3 303 aa13.86□□□□□ -0.19
SSBP4-210ENST00000601444 SYT8Q8NBV8 401 aa13.86□□□□□ -0.19
SSBP4-210ENST00000601444 ZNRF2Q8NHG8 242 aa13.86□□□□□ -0.19
SSBP4-210ENST00000601444 A8MWV9 139 aa13.85□□□□□ -0.19
SSBP4-210ENST00000601444 SRP19P09132 144 aaKnown RBP13.85□□□□□ -0.19
SSBP4-210ENST00000601444 CXCL1P09341 107 aa13.85□□□□□ -0.19
SSBP4-210ENST00000601444 UFSP1Q6NVU6 142 aa13.85□□□□□ -0.19
SSBP4-210ENST00000601444 OR2D3Q8NGH3 330 aa13.85□□□□□ -0.19
SSBP4-210ENST00000601444 OR10AG1Q8NH19 301 aa13.85□□□□□ -0.19
SSBP4-210ENST00000601444 MED14OSP0DP75 135 aa13.84□□□□□ -0.19
SSBP4-210ENST00000601444 SSTP61278 116 aa13.84□□□□□ -0.19
SSBP4-210ENST00000601444 SRSF3P84103 164 aaKnown RBP13.84□□□□□ -0.19
SSBP4-210ENST00000601444 MRPL23Q16540 153 aaKnown RBP13.84□□□□□ -0.19
SSBP4-210ENST00000601444 NUDT10Q8NFP7 164 aa13.84□□□□□ -0.19
SSBP4-210ENST00000601444 NUDT11Q96G61 164 aa13.84□□□□□ -0.19
SSBP4-210ENST00000601444 SSBP4Q9BWG4 385 aaPredicted RBP13.84□□□□□ -0.19
SSBP4-210ENST00000601444 DNAH10Q8IVF4 4471 aa13.83□□□□□ -0.2
SSBP4-210ENST00000601444 DNAH2Q9P225 4427 aa13.83□□□□□ -0.2
SSBP4-210ENST00000601444 A0A087WWL8 130 aa13.83□□□□□ -0.2
SSBP4-210ENST00000601444 C9JQL5 133 aa13.83□□□□□ -0.2
SSBP4-210ENST00000601444 SNAI2O43623 268 aa13.83□□□□□ -0.2
SSBP4-210ENST00000601444 CIDEAO60543 219 aa13.83□□□□□ -0.2
SSBP4-210ENST00000601444 P01737 135 aa13.83□□□□□ -0.2
SSBP4-210ENST00000601444 FAM3BP58499 235 aaPredicted RBP13.83□□□□□ -0.2
SSBP4-210ENST00000601444 ZFP82Q8N141 532 aa13.83□□□□□ -0.2
SSBP4-210ENST00000601444 SFRP2Q96HF1 295 aa13.83□□□□□ -0.2
SSBP4-210ENST00000601444 RNASE7Q9H1E1 156 aaKnown RBP13.83□□□□□ -0.2
SSBP4-210ENST00000601444 OR5AL1P0C617 328 aa13.82□□□□□ -0.2
SSBP4-210ENST00000601444 LYPD5Q6UWN5 251 aa13.82□□□□□ -0.2
SSBP4-210ENST00000601444 ZFP2Q6ZN57 461 aa13.82□□□□□ -0.2
SSBP4-210ENST00000601444 BIN3Q9NQY0 253 aa13.82□□□□□ -0.2
SSBP4-210ENST00000601444 TRBV6-4A0A1B0GX49 114 aa13.81□□□□□ -0.2
SSBP4-210ENST00000601444 CRYGDP07320 174 aa13.81□□□□□ -0.2
SSBP4-210ENST00000601444 SRIP30626 198 aa13.81□□□□□ -0.2
SSBP4-210ENST00000601444 FAM74A4Q5TZK3 123 aa13.81□□□□□ -0.2
SSBP4-210ENST00000601444 NEGR1Q7Z3B1 354 aa13.81□□□□□ -0.2
SSBP4-210ENST00000601444 Q9UF83 564 aa13.81□□□□□ -0.2
SSBP4-210ENST00000601444 MRPS16Q9Y3D3 137 aaKnown RBP13.81□□□□□ -0.2
SSBP4-210ENST00000601444 NDUFS6O75380 124 aaKnown RBP13.8□□□□□ -0.2
SSBP4-210ENST00000601444 NXPH4O95158 308 aa13.8□□□□□ -0.2
SSBP4-210ENST00000601444 IGLC6P0CF74 106 aa13.8□□□□□ -0.2
SSBP4-210ENST00000601444 Q6ZR54 194 aa13.8□□□□□ -0.2
SSBP4-210ENST00000601444 C14orf178Q8N769 122 aaPredicted RBP13.8□□□□□ -0.2
SSBP4-210ENST00000601444 SMIM7Q9BQ49 75 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms