RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 BATFQ16520 125 aa8.79□□□□□ -1
VRK3-223ENST00000601341 KRTAP24-1Q3LI83 254 aa8.79□□□□□ -1
VRK3-223ENST00000601341 NXT2Q9NPJ8 142 aaKnown RBP8.79□□□□□ -1
VRK3-223ENST00000601341 GOLT1BQ9Y3E0 138 aa8.79□□□□□ -1
VRK3-223ENST00000601341 A0A096LNJ9 63 aa8.78□□□□□ -1
VRK3-223ENST00000601341 TRAV8-2A0A0B4J237 113 aa8.78□□□□□ -1
VRK3-223ENST00000601341 TRBV7-9A0A0J9YWB2 115 aa8.78□□□□□ -1
VRK3-223ENST00000601341 PRSS47A8MTI9 375 aa8.78□□□□□ -1
VRK3-223ENST00000601341 PRIMA1Q86XR5 153 aa8.78□□□□□ -1
VRK3-223ENST00000601341 CITED1Q99966 193 aa8.78□□□□□ -1
VRK3-223ENST00000601341 AGPAT4-IT1Q9H0P7 198 aa8.78□□□□□ -1
VRK3-223ENST00000601341 MAP1LC3AQ9H492 121 aa8.78□□□□□ -1
VRK3-223ENST00000601341 TMSB15BA0A087X1C1 80 aa8.78□□□□□ -1
VRK3-223ENST00000601341 OVOL1O14753 267 aa8.78□□□□□ -1
VRK3-223ENST00000601341 HLA-DMBP28068 263 aa8.78□□□□□ -1
VRK3-223ENST00000601341 CACNG7P62955 275 aa8.78□□□□□ -1
VRK3-223ENST00000601341 SAMD13Q5VXD3 122 aa8.78□□□□□ -1
VRK3-223ENST00000601341 LINC00477Q96M19 166 aa8.78□□□□□ -1
VRK3-223ENST00000601341 COX8AP10176 69 aa8.77□□□□□ -1.01
VRK3-223ENST00000601341 ADAMTSL5Q6ZMM2 481 aa8.77□□□□□ -1.01
VRK3-223ENST00000601341 RNF185Q96GF1 192 aa8.77□□□□□ -1.01
VRK3-223ENST00000601341 C16orf92Q96LL3 132 aa8.77□□□□□ -1.01
VRK3-223ENST00000601341 IGKV3-7A0A075B6H7 116 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 hDV102S1A0JD36 115 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 PRAC2D3DTV9 90 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 SNAI2O43623 268 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 NPYP01303 97 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 PF4P02776 101 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 G0S2P27469 103 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 PRR31Q5SQ13 230 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 SMIM15Q7Z3B0 74 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 ZNF738Q8NE65 137 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 IGKV3D-20A0A0C4DH25 116 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 ERCC8Q13216 396 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 IGFL4Q6B9Z1 124 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 DYNLRB2Q8TF09 96 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 SELENOKQ9Y6D0 94 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
VRK3-223ENST00000601341 SOCS3O14543 225 aa8.75□□□□□ -1.01
VRK3-223ENST00000601341 ID1P41134 155 aa8.75□□□□□ -1.01
VRK3-223ENST00000601341 HINT1P49773 126 aaPredicted RBP8.75□□□□□ -1.01
VRK3-223ENST00000601341 RNF182Q8N6D2 247 aa8.75□□□□□ -1.01
VRK3-223ENST00000601341 IFI27L1Q96BM0 104 aa8.75□□□□□ -1.01
VRK3-223ENST00000601341 WNK1Q9H4A3 2382 aa8.74□□□□□ -1.01
VRK3-223ENST00000601341 SIVA1O15304 175 aa8.74□□□□□ -1.01
VRK3-223ENST00000601341 MED14OSP0DP75 135 aa8.74□□□□□ -1.01
VRK3-223ENST00000601341 FCER1GP30273 86 aa8.74□□□□□ -1.01
VRK3-223ENST00000601341 TFPI2P48307 235 aa8.74□□□□□ -1.01
VRK3-223ENST00000601341 DEFB114Q30KQ6 69 aa8.74□□□□□ -1.01
VRK3-223ENST00000601341 DCANP1Q8TF63 244 aa8.74□□□□□ -1.01
VRK3-223ENST00000601341 TMEM158Q8WZ71 300 aa8.74□□□□□ -1.01
VRK3-223ENST00000601341 LOC389332A0A1B0GUA5 103 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 TNFRSF6BO95407 300 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 WFDC3Q8IUB2 231 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 APRG1Q8IVJ8 170 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 Q8N8P6 123 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 K7EMI3 77 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 SNRPD3P62318 126 aaKnown RBP8.73□□□□□ -1.01
VRK3-223ENST00000601341 BVES-AS1Q5T3Y7 98 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 LINC00482Q8N8I6 264 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 OR10J6PQ8NGY7 276 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 MRAP2Q96G30 205 aa8.73□□□□□ -1.01
VRK3-223ENST00000601341 TENM1Q9UKZ4 2725 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 TRAV2A0A0B4J234 112 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 TRAV25A0A0B4J276 109 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 K7EQG2 157 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 SAP30O75446 220 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 NPSP0C0P6 89 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 KIR3DS1Q14943 382 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 MPV17L2Q567V2 206 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 TMEM61Q8N0U2 210 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 C3orf56Q8N813 242 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 OR8A1Q8NGG7 326 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 MSRB1Q9NZV6 116 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 C11orf21Q9P2W6 132 aa8.72□□□□□ -1.01
VRK3-223ENST00000601341 IGLV2-18A0A075B6J9 118 aa8.71□□□□□ -1.01
VRK3-223ENST00000601341 ATP5LO75964 103 aa8.71□□□□□ -1.01
VRK3-223ENST00000601341 NUDT3O95989 172 aa8.71□□□□□ -1.01
VRK3-223ENST00000601341 SEC11AP67812 179 aa8.71□□□□□ -1.01
VRK3-223ENST00000601341 CD300EQ496F6 205 aaPredicted RBP8.71□□□□□ -1.01
VRK3-223ENST00000601341 BOD1L2Q8IYS8 172 aa8.71□□□□□ -1.01
VRK3-223ENST00000601341 C20orf173Q96LM9 149 aa8.71□□□□□ -1.01
VRK3-223ENST00000601341 FAM19A4Q96LR4 140 aa8.71□□□□□ -1.01
VRK3-223ENST00000601341 ZMAT4Q9H898 229 aa8.71□□□□□ -1.01
VRK3-223ENST00000601341 NCR2O95944 276 aa8.71□□□□□ -1.02
VRK3-223ENST00000601341 FGF6P10767 208 aa8.71□□□□□ -1.02
VRK3-223ENST00000601341 UBE2V1Q13404 147 aa8.71□□□□□ -1.02
VRK3-223ENST00000601341 ZFAND2AQ8N6M9 145 aa8.71□□□□□ -1.02
VRK3-223ENST00000601341 OR2K2Q8NGT1 345 aa8.71□□□□□ -1.02
VRK3-223ENST00000601341 SPAG8Q99932 426 aaPredicted RBP8.71□□□□□ -1.02
VRK3-223ENST00000601341 FBN1P35555 2871 aaKnown RBP8.7□□□□□ -1.02
VRK3-223ENST00000601341 H0Y8G0 127 aa8.7□□□□□ -1.02
VRK3-223ENST00000601341 PRB4P10163 310 aaPredicted RBP8.7□□□□□ -1.02
VRK3-223ENST00000601341 HLA-DRB4P13762 266 aa8.7□□□□□ -1.02
VRK3-223ENST00000601341 SHISA2Q6UWI4 295 aa8.7□□□□□ -1.02
VRK3-223ENST00000601341 HLA-DRB4X5D2U9 266 aa8.7□□□□□ -1.02
VRK3-223ENST00000601341 MUC21A0A0G2JKD1 596 aa8.69□□□□□ -1.02
VRK3-223ENST00000601341 MUC21A0A140T8X8 626 aa8.69□□□□□ -1.02
VRK3-223ENST00000601341 SMKR1H3BMG3 65 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms