RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 FMC1Q96HJ9 113 aa6.28□□□□□ -1.4
TRIM28-214ENST00000600840 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
TRIM28-214ENST00000600840 NEU1Q99519 415 aa6.28□□□□□ -1.4
TRIM28-214ENST00000600840 GNB1LQ9BYB4 327 aa6.28□□□□□ -1.4
TRIM28-214ENST00000600840 ZFP30Q9Y2G7 519 aa6.28□□□□□ -1.4
TRIM28-214ENST00000600840 XKRY2A2RUG3 117 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 PRM2P04554 102 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 TSPOP30536 169 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 LEPP41159 167 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 CT83Q5H943 113 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 SAPCD1Q5SSQ6 148 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 Q6AWC8 147 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 PRNTQ86SH4 94 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 C20orf144Q9BQM9 153 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 LINC00467Q9BRT7 94 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 C1QTNF4Q9BXJ3 329 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 C11orf21Q9P2W6 132 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 VPS13DQ5THJ4 4388 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 ABCA13Q86UQ4 5058 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
TRIM28-214ENST00000600840 C7orf71A4D174 169 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 K7EQM0 130 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 HLA-DQA1P01909 254 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 UBE2G1P62253 170 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 IBA57Q5T440 356 aaKnown RBP6.26□□□□□ -1.41
TRIM28-214ENST00000600840 FAM162BQ5T6X4 162 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 ATP5L2Q7Z4Y8 100 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 BAGE2Q86Y30 109 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 Q8NAQ8 132 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 OR10D4PQ8NGN7 298 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 V9GYV3 84 aa6.26□□□□□ -1.41
TRIM28-214ENST00000600840 TRAV12-3A0A0B4J271 114 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 SMIM27A0A1W2PRY6 76 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 PLAC8L1A1L4L8 177 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 FAM231BA6NCW3 169 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 PCP4L1A6NKN8 68 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 TSTD3H0UI37 97 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 GPX1P07203 203 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 MED14OSP0DP75 135 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 ESDP10768 282 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 AZU1P20160 251 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 RNASE4P34096 147 aaKnown RBP6.25□□□□□ -1.41
TRIM28-214ENST00000600840 JOSD1Q15040 202 aaPredicted RBP6.25□□□□□ -1.41
TRIM28-214ENST00000600840 TDRG1Q3Y452 100 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 OR10J3Q5JRS4 329 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 DMRTA1Q5VZB9 504 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 C11orf45Q8TAV5 145 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 ZC2HC1AQ96GY0 325 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 HIST1H2BLQ99880 126 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 C11orf68Q9H3H3 251 aaKnown RBP6.25□□□□□ -1.41
TRIM28-214ENST00000600840 TP53TG3Q9ULZ0 132 aa6.25□□□□□ -1.41
TRIM28-214ENST00000600840 KLK5Q9Y337 293 aaPredicted RBP6.25□□□□□ -1.41
TRIM28-214ENST00000600840 IGKV3D-20A0A0C4DH25 116 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 IGHV4-28A0A0C4DH34 117 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 A0A1B0GVY2 172 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 C19orf71A6NCJ1 209 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 PGPEP1LA6NFU8 196 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 J3KRW8 73 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 K7EN84 100 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 INSP01308 110 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 FABP4P15090 132 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 Q0VG73 95 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 IQCJQ1A5X6 159 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 LGALS9CQ6DKI2 356 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 TMEM256Q8N2U0 113 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 GFRA4Q9GZZ7 299 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 GSN-AS1Q9NRJ2 163 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 NAT8BQ9UHF3 227 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 APLNQ9ULZ1 77 aa6.24□□□□□ -1.41
TRIM28-214ENST00000600840 TRAV21A0A0B4J279 112 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 SMIM9A6NGZ8 99 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 IFITM10A6NMD0 228 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 FABP5P3A8MUU1 101 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 ZNF705GA8MUZ8 300 aaPredicted RBP6.23□□□□□ -1.41
TRIM28-214ENST00000600840 GATCO43716 136 aaKnown RBP6.23□□□□□ -1.41
TRIM28-214ENST00000600840 PKIAP61925 76 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 CTAG1AP78358 180 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 ANXA2RQ3ZCQ2 193 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 PYY3Q5JQD4 70 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 NHLRC2Q8NBF2 726 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 C11orf72Q8NBR9 251 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 MRPL18Q9H0U6 180 aaKnown RBP6.23□□□□□ -1.41
TRIM28-214ENST00000600840 CELA1Q9UNI1 258 aa6.23□□□□□ -1.41
TRIM28-214ENST00000600840 A8MWL6 223 aa6.22□□□□□ -1.41
TRIM28-214ENST00000600840 GNRH2O43555 120 aa6.22□□□□□ -1.41
TRIM28-214ENST00000600840 MGST1P10620 155 aaKnown RBP6.22□□□□□ -1.41
TRIM28-214ENST00000600840 MIFP14174 115 aa6.22□□□□□ -1.41
TRIM28-214ENST00000600840 RAB4AP20338 218 aa6.22□□□□□ -1.41
TRIM28-214ENST00000600840 RNASE8Q8TDE3 154 aaKnown RBP6.22□□□□□ -1.41
TRIM28-214ENST00000600840 TSKUQ8WUA8 353 aa6.22□□□□□ -1.41
TRIM28-214ENST00000600840 NDFIP1Q9BT67 221 aa6.22□□□□□ -1.41
TRIM28-214ENST00000600840 GOLT1BQ9Y3E0 138 aa6.22□□□□□ -1.41
TRIM28-214ENST00000600840 IGHV1OR15-1A0A075B7D0 117 aa6.21□□□□□ -1.42
TRIM28-214ENST00000600840 A0A1B0GW15 77 aa6.21□□□□□ -1.42
TRIM28-214ENST00000600840 SNURFLB1AK76 121 aa6.21□□□□□ -1.42
TRIM28-214ENST00000600840 IGLL5B9A064 214 aa6.21□□□□□ -1.42
TRIM28-214ENST00000600840 SH2D1AO60880 128 aa6.21□□□□□ -1.42
TRIM28-214ENST00000600840 OR5I1Q13606 314 aa6.21□□□□□ -1.42
TRIM28-214ENST00000600840 LINC01559Q495D7 138 aa6.21□□□□□ -1.42
TRIM28-214ENST00000600840 LBHQ53QV2 105 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms