RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	IL36B	Q9NZH7	164 aa		15.73	■□□□□ 0.11
LTBP4-227	ENST00000600026	FAM231B	A6NCW3	169 aa		15.72	■□□□□ 0.11
LTBP4-227	ENST00000600026	RNASE3	P12724	160 aa	Known RBP	15.72	■□□□□ 0.11
LTBP4-227	ENST00000600026	S100A1	P23297	94 aa		15.72	■□□□□ 0.11
LTBP4-227	ENST00000600026	TPPP3	Q9BW30	176 aa		15.72	■□□□□ 0.11
LTBP4-227	ENST00000600026	IGLC6	P0CF74	106 aa		15.71	■□□□□ 0.11
LTBP4-227	ENST00000600026	EMP1	P54849	157 aa		15.71	■□□□□ 0.11
LTBP4-227	ENST00000600026	IL17D	Q8TAD2	202 aa		15.71	■□□□□ 0.11
LTBP4-227	ENST00000600026	C9orf85	Q96MD7	179 aa		15.71	■□□□□ 0.11
LTBP4-227	ENST00000600026		F2Z2F3	143 aa		15.7	■□□□□ 0.1
LTBP4-227	ENST00000600026	TMEM242	Q9NWH2	141 aa		15.7	■□□□□ 0.1
LTBP4-227	ENST00000600026	CELA1	Q9UNI1	258 aa		15.7	■□□□□ 0.1
LTBP4-227	ENST00000600026	PHLDA3	Q9Y5J5	127 aa		15.7	■□□□□ 0.1
LTBP4-227	ENST00000600026	PLAC8L1	A1L4L8	177 aa		15.69	■□□□□ 0.1
LTBP4-227	ENST00000600026	SNAI2	O43623	268 aa		15.69	■□□□□ 0.1
LTBP4-227	ENST00000600026	OR5AL1	P0C617	328 aa		15.69	■□□□□ 0.1
LTBP4-227	ENST00000600026	DAZ2	Q13117	558 aa	Known RBP	15.69	■□□□□ 0.1
LTBP4-227	ENST00000600026	SSBP4	Q9BWG4	385 aa	Predicted RBP	15.69	■□□□□ 0.1
LTBP4-227	ENST00000600026	NOP10	Q9NPE3	64 aa	Known RBP	15.69	■□□□□ 0.1
LTBP4-227	ENST00000600026	NAT8B	Q9UHF3	227 aa		15.69	■□□□□ 0.1
LTBP4-227	ENST00000600026	SMIM27	A0A1W2PRY6	76 aa		15.68	■□□□□ 0.1
LTBP4-227	ENST00000600026	FOXA3	P55318	350 aa	Predicted RBP	15.68	■□□□□ 0.1
LTBP4-227	ENST00000600026	LYZL1	Q6UWQ5	148 aa		15.68	■□□□□ 0.1
LTBP4-227	ENST00000600026	SYT8	Q8NBV8	401 aa		15.68	■□□□□ 0.1
LTBP4-227	ENST00000600026	C11orf45	Q8TAV5	145 aa		15.68	■□□□□ 0.1
LTBP4-227	ENST00000600026	GTSF1	Q8WW33	167 aa		15.68	■□□□□ 0.1
LTBP4-227	ENST00000600026	BORCS7	Q96B45	105 aa		15.68	■□□□□ 0.1
LTBP4-227	ENST00000600026	SCRT2	Q9NQ03	307 aa		15.68	■□□□□ 0.1
LTBP4-227	ENST00000600026	LYRM9	A8MSI8	78 aa		15.67	■□□□□ 0.1
LTBP4-227	ENST00000600026	HIGD1C	A8MV81	97 aa		15.67	■□□□□ 0.1
LTBP4-227	ENST00000600026		M0R2P5	195 aa		15.67	■□□□□ 0.1
LTBP4-227	ENST00000600026	MUC7	Q8TAX7	377 aa		15.67	■□□□□ 0.1
LTBP4-227	ENST00000600026	PGLYRP4	Q96LB8	373 aa		15.67	■□□□□ 0.1
LTBP4-227	ENST00000600026	IMMP2L	Q96T52	175 aa		15.67	■□□□□ 0.1
LTBP4-227	ENST00000600026	MUC4	Q99102	2169 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	TEX48	A0A1B0GUV7	120 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	CXorf65	A6NEN9	183 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	CTRL	P40313	264 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	NANOS2	P60321	138 aa	Known RBP	15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	CACNG7	P62955	275 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	FAM222A	Q5U5X8	452 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	SPANXN1	Q5VSR9	72 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	KCNIP4	Q6PIL6	250 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	ZFP82	Q8N141	532 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	DKK2	Q9UBU2	259 aa		15.66	■□□□□ 0.1
LTBP4-227	ENST00000600026	TRGV1	A0A0A0MS02	117 aa		15.65	■□□□□ 0.1
LTBP4-227	ENST00000600026	SPINK4	O60575	86 aa		15.65	■□□□□ 0.1
LTBP4-227	ENST00000600026	SPART-AS1	P0CW21	52 aa		15.65	■□□□□ 0.1
LTBP4-227	ENST00000600026	S100P	P25815	95 aa		15.65	■□□□□ 0.1
LTBP4-227	ENST00000600026	LGALS9B	Q3B8N2	356 aa		15.65	■□□□□ 0.1
LTBP4-227	ENST00000600026	WDR73	Q6P4I2	378 aa		15.65	■□□□□ 0.1
LTBP4-227	ENST00000600026	NUP35	Q8NFH5	326 aa		15.65	■□□□□ 0.1
LTBP4-227	ENST00000600026	PTH2	Q96A98	100 aa		15.65	■□□□□ 0.1
LTBP4-227	ENST00000600026	ZNF876P	Q49A33	203 aa		15.64	■□□□□ 0.09
LTBP4-227	ENST00000600026	ATRAID	Q6UW56	229 aa		15.64	■□□□□ 0.09
LTBP4-227	ENST00000600026	OR10AG1	Q8NH19	301 aa		15.64	■□□□□ 0.09
LTBP4-227	ENST00000600026	MRPL16	Q9NX20	251 aa	Known RBP	15.64	■□□□□ 0.09
LTBP4-227	ENST00000600026	MUC21	A0A0G2JKD1	596 aa		15.63	■□□□□ 0.09
LTBP4-227	ENST00000600026	MUC21	A0A140T8X8	626 aa		15.63	■□□□□ 0.09
LTBP4-227	ENST00000600026		M0R381	172 aa		15.63	■□□□□ 0.09
LTBP4-227	ENST00000600026	NDUFAF3	Q9BU61	184 aa		15.63	■□□□□ 0.09
LTBP4-227	ENST00000600026	DYNC2H1	Q8NCM8	4307 aa	Known RBP	15.62	■□□□□ 0.09
LTBP4-227	ENST00000600026	STARD9	Q9P2P6	4700 aa		15.62	■□□□□ 0.09
LTBP4-227	ENST00000600026		A0A1B0GUT8	65 aa		15.62	■□□□□ 0.09
LTBP4-227	ENST00000600026	FAM3B	P58499	235 aa	Predicted RBP	15.62	■□□□□ 0.09
LTBP4-227	ENST00000600026	SST	P61278	116 aa		15.62	■□□□□ 0.09
LTBP4-227	ENST00000600026	C12orf74	Q32Q52	190 aa		15.62	■□□□□ 0.09
LTBP4-227	ENST00000600026	PIK3CD-AS1	Q5SR53	167 aa		15.62	■□□□□ 0.09
LTBP4-227	ENST00000600026	GAGE12B	A1L429	117 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	GAGE7	O76087	117 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	GAGE12F	P0CL80	117 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	GAGE12G	P0CL81	117 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	GAGE12I	P0CL82	117 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	RIG	Q13278	110 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	DMRTA1	Q5VZB9	504 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	ZFAND6	Q6FIF0	208 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026		Q6ZTI0	123 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	RASL10A	Q92737	203 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	CNFN	Q9BYD5	112 aa		15.61	■□□□□ 0.09
LTBP4-227	ENST00000600026	IGHV4-4	A0A075B6R2	117 aa		15.6	■□□□□ 0.09
LTBP4-227	ENST00000600026	NXPH4	O95158	308 aa		15.6	■□□□□ 0.09
LTBP4-227	ENST00000600026	DAD1	P61803	113 aa		15.6	■□□□□ 0.09
LTBP4-227	ENST00000600026	TWIST1	Q15672	202 aa		15.6	■□□□□ 0.09
LTBP4-227	ENST00000600026		Q6ZTC4	211 aa		15.6	■□□□□ 0.09
LTBP4-227	ENST00000600026	TRGV2	A0A075B6R0	118 aa		15.59	■□□□□ 0.09
LTBP4-227	ENST00000600026	TRAV9-1	A0A075B6T8	112 aa		15.59	■□□□□ 0.09
LTBP4-227	ENST00000600026	DEFB130B	P0DP73	79 aa		15.59	■□□□□ 0.09
LTBP4-227	ENST00000600026	DEFB130A	P0DP74	79 aa		15.59	■□□□□ 0.09
LTBP4-227	ENST00000600026	NTF3	P20783	257 aa		15.59	■□□□□ 0.09
LTBP4-227	ENST00000600026	BTF3L4	Q96K17	158 aa		15.59	■□□□□ 0.09
LTBP4-227	ENST00000600026	SMCO4	Q9NRQ5	59 aa		15.59	■□□□□ 0.09
LTBP4-227	ENST00000600026	URGCP-MRPS24	S4R325	110 aa		15.59	■□□□□ 0.09
LTBP4-227	ENST00000600026	C3orf84	H3BNL1	204 aa		15.58	■□□□□ 0.08
LTBP4-227	ENST00000600026	TRGC1	P0CF51	173 aa		15.58	■□□□□ 0.08
LTBP4-227	ENST00000600026	LINC00612	Q8N6U2	182 aa		15.58	■□□□□ 0.08
LTBP4-227	ENST00000600026	CSMD3	Q7Z407	3707 aa		15.58	■□□□□ 0.08
LTBP4-227	ENST00000600026		A0A1B0GW15	77 aa		15.57	■□□□□ 0.08
LTBP4-227	ENST00000600026		A8MWV9	139 aa		15.57	■□□□□ 0.08
LTBP4-227	ENST00000600026	SMIM15	Q7Z3B0	74 aa		15.57	■□□□□ 0.08
LTBP4-227	ENST00000600026	ATP5L2	Q7Z4Y8	100 aa		15.57	■□□□□ 0.08

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