RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 H2BFSP57053 126 aa12.65□□□□□ -0.38
IRF3-222ENST00000599144 SCGB1C1Q8TD33 95 aa12.65□□□□□ -0.38
IRF3-222ENST00000599144 DEFB104AQ8WTQ1 72 aa12.65□□□□□ -0.38
IRF3-222ENST00000599144 C9orf85Q96MD7 179 aa12.65□□□□□ -0.38
IRF3-222ENST00000599144 LAGE3Q14657 143 aa12.64□□□□□ -0.39
IRF3-222ENST00000599144 FAM74A1Q5RGS3 127 aa12.64□□□□□ -0.39
IRF3-222ENST00000599144 PPP1R1CQ8WVI7 109 aa12.64□□□□□ -0.39
IRF3-222ENST00000599144 FAT3Q8TDW7 4589 aa12.64□□□□□ -0.39
IRF3-222ENST00000599144 UBR4Q5T4S7 5183 aa12.63□□□□□ -0.39
IRF3-222ENST00000599144 GCGP01275 180 aa12.63□□□□□ -0.39
IRF3-222ENST00000599144 KRTAP10-4P60372 401 aaPredicted RBP12.63□□□□□ -0.39
IRF3-222ENST00000599144 JPT2Q9H910 190 aa12.63□□□□□ -0.39
IRF3-222ENST00000599144 RNASE3P12724 160 aaKnown RBP12.62□□□□□ -0.39
IRF3-222ENST00000599144 OR2T35Q8NGX2 323 aa12.62□□□□□ -0.39
IRF3-222ENST00000599144 SAMD10Q9BYL1 202 aa12.62□□□□□ -0.39
IRF3-222ENST00000599144 RPL12P30050 165 aaKnown RBP12.61□□□□□ -0.39
IRF3-222ENST00000599144 Q6ZNX1 250 aa12.61□□□□□ -0.39
IRF3-222ENST00000599144 NDFIP1Q9BT67 221 aa12.61□□□□□ -0.39
IRF3-222ENST00000599144 PARLQ9H300 379 aa12.61□□□□□ -0.39
IRF3-222ENST00000599144 PSG8Q9UQ74 426 aa12.61□□□□□ -0.39
IRF3-222ENST00000599144 A0A1W2PPV4 95 aa12.6□□□□□ -0.39
IRF3-222ENST00000599144 RBFOX3A6NFN3 312 aa12.6□□□□□ -0.39
IRF3-222ENST00000599144 MPC2O95563 127 aa12.6□□□□□ -0.39
IRF3-222ENST00000599144 LINC00694P0DN24 101 aa12.6□□□□□ -0.39
IRF3-222ENST00000599144 MGST1P10620 155 aaKnown RBP12.6□□□□□ -0.39
IRF3-222ENST00000599144 ACOT6Q3I5F7 207 aaPredicted RBP12.6□□□□□ -0.39
IRF3-222ENST00000599144 PQLC2Q6ZP29 291 aa12.6□□□□□ -0.39
IRF3-222ENST00000599144 PRNTQ86SH4 94 aa12.6□□□□□ -0.39
IRF3-222ENST00000599144 C14orf178Q8N769 122 aaPredicted RBP12.6□□□□□ -0.39
IRF3-222ENST00000599144 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
IRF3-222ENST00000599144 TAAR5O14804 337 aa12.59□□□□□ -0.39
IRF3-222ENST00000599144 TCRAP04437 139 aa12.59□□□□□ -0.39
IRF3-222ENST00000599144 PET100P0DJ07 73 aa12.59□□□□□ -0.39
IRF3-222ENST00000599144 ARL14EPLP0DKL9 152 aa12.59□□□□□ -0.39
IRF3-222ENST00000599144 OR10G9Q8NGN4 311 aa12.59□□□□□ -0.39
IRF3-222ENST00000599144 OR10G7Q8NGN6 311 aa12.59□□□□□ -0.39
IRF3-222ENST00000599144 CIDEAO60543 219 aa12.58□□□□□ -0.4
IRF3-222ENST00000599144 IGLV2-11P01706 119 aa12.58□□□□□ -0.4
IRF3-222ENST00000599144 GIPP09681 153 aaPredicted RBP12.58□□□□□ -0.4
IRF3-222ENST00000599144 LGALSLQ3ZCW2 172 aaPredicted RBP12.58□□□□□ -0.4
IRF3-222ENST00000599144 CIRBP-AS1Q8TBR5 109 aa12.58□□□□□ -0.4
IRF3-222ENST00000599144 IGKV2D-24A0A075B6R9 120 aa12.57□□□□□ -0.4
IRF3-222ENST00000599144 GGTLC3B5MD39 225 aa12.57□□□□□ -0.4
IRF3-222ENST00000599144 BOLA1Q9Y3E2 137 aa12.57□□□□□ -0.4
IRF3-222ENST00000599144 IGKV3D-20A0A0C4DH25 116 aa12.56□□□□□ -0.4
IRF3-222ENST00000599144 FLI1Q01543 452 aaPredicted RBP12.56□□□□□ -0.4
IRF3-222ENST00000599144 ARL6IP6Q8N6S5 226 aa12.56□□□□□ -0.4
IRF3-222ENST00000599144 LINC00479Q96M42 142 aa12.56□□□□□ -0.4
IRF3-222ENST00000599144 CHAC1Q9BUX1 264 aa12.56□□□□□ -0.4
IRF3-222ENST00000599144 KLK12Q9UKR0 248 aa12.56□□□□□ -0.4
IRF3-222ENST00000599144 CDC34P49427 236 aaPredicted RBP12.55□□□□□ -0.4
IRF3-222ENST00000599144 SMUG1Q53HV7 270 aa12.55□□□□□ -0.4
IRF3-222ENST00000599144 SERTAD4-AS1Q5TG53 156 aa12.55□□□□□ -0.4
IRF3-222ENST00000599144 C5orf17Q8NAS9 161 aa12.55□□□□□ -0.4
IRF3-222ENST00000599144 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
IRF3-222ENST00000599144 PTH2Q96A98 100 aa12.55□□□□□ -0.4
IRF3-222ENST00000599144 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
IRF3-222ENST00000599144 RNF222A6NCQ9 220 aa12.54□□□□□ -0.4
IRF3-222ENST00000599144 IGLV2-8P01709 118 aa12.54□□□□□ -0.4
IRF3-222ENST00000599144 GCHFRP30047 84 aa12.54□□□□□ -0.4
IRF3-222ENST00000599144 SUMO1P63165 101 aaKnown RBP12.54□□□□□ -0.4
IRF3-222ENST00000599144 TOR2AQ5JU69 321 aa12.54□□□□□ -0.4
IRF3-222ENST00000599144 UFSP1Q6NVU6 142 aa12.54□□□□□ -0.4
IRF3-222ENST00000599144 CYB561D1Q8N8Q1 229 aa12.54□□□□□ -0.4
IRF3-222ENST00000599144 UBE2WQ96B02 151 aa12.54□□□□□ -0.4
IRF3-222ENST00000599144 STAG3L2P0CL84 134 aa12.53□□□□□ -0.4
IRF3-222ENST00000599144 STAG3L3P0CL85 134 aa12.53□□□□□ -0.4
IRF3-222ENST00000599144 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
IRF3-222ENST00000599144 ZFP69Q49AA0 526 aa12.53□□□□□ -0.4
IRF3-222ENST00000599144 NIT1Q86X76 327 aa12.53□□□□□ -0.4
IRF3-222ENST00000599144 HSD17B11Q8NBQ5 300 aa12.53□□□□□ -0.4
IRF3-222ENST00000599144 RAB24Q969Q5 203 aa12.53□□□□□ -0.4
IRF3-222ENST00000599144 EPDR1Q9UM22 224 aa12.53□□□□□ -0.4
IRF3-222ENST00000599144 SERTM2A0A1B0GWG4 89 aa12.52□□□□□ -0.41
IRF3-222ENST00000599144 A8MWV9 139 aa12.52□□□□□ -0.41
IRF3-222ENST00000599144 ZFP2Q6ZN57 461 aa12.52□□□□□ -0.41
IRF3-222ENST00000599144 Q8N976 141 aa12.52□□□□□ -0.41
IRF3-222ENST00000599144 PLA2G2DQ9UNK4 145 aa12.52□□□□□ -0.41
IRF3-222ENST00000599144 H3BVH4 76 aa12.51□□□□□ -0.41
IRF3-222ENST00000599144 ASIPP42127 132 aa12.51□□□□□ -0.41
IRF3-222ENST00000599144 HNRNPA3P51991 378 aaKnown RBP12.51□□□□□ -0.41
IRF3-222ENST00000599144 FAM74A4Q5TZK3 123 aa12.51□□□□□ -0.41
IRF3-222ENST00000599144 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
IRF3-222ENST00000599144 hCG_2014768A0A024R1R8 64 aa12.5□□□□□ -0.41
IRF3-222ENST00000599144 GRIFINA4D1Z8 144 aa12.5□□□□□ -0.41
IRF3-222ENST00000599144 K7EQM0 130 aa12.5□□□□□ -0.41
IRF3-222ENST00000599144 RMI2Q96E14 147 aa12.5□□□□□ -0.41
IRF3-222ENST00000599144 URGCP-MRPS24S4R325 110 aa12.5□□□□□ -0.41
IRF3-222ENST00000599144 A0A087WWC5 75 aa12.49□□□□□ -0.41
IRF3-222ENST00000599144 A0A087WWL8 130 aa12.49□□□□□ -0.41
IRF3-222ENST00000599144 M0R036 132 aa12.49□□□□□ -0.41
IRF3-222ENST00000599144 OXTP01178 125 aa12.49□□□□□ -0.41
IRF3-222ENST00000599144 SUN5Q8TC36 379 aa12.49□□□□□ -0.41
IRF3-222ENST00000599144 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
IRF3-222ENST00000599144 ARL2-SNX15V9GYD0 113 aa12.49□□□□□ -0.41
IRF3-222ENST00000599144 SH3BGRL3Q9H299 93 aa12.48□□□□□ -0.41
IRF3-222ENST00000599144 ARMS2P0C7Q2 107 aa12.47□□□□□ -0.41
IRF3-222ENST00000599144 FGF8P55075 233 aaPredicted RBP12.47□□□□□ -0.41
IRF3-222ENST00000599144 Q5BKY6 102 aa12.47□□□□□ -0.41
IRF3-222ENST00000599144 SAPCD1Q5SSQ6 148 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms