RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ANXA2RQ3ZCQ2 193 aa13.81□□□□□ -0.2
PNKP-207ENST00000596014 MUC21Q5SSG8 566 aa13.81□□□□□ -0.2
PNKP-207ENST00000596014 FAM222AQ5U5X8 452 aa13.81□□□□□ -0.2
PNKP-207ENST00000596014 FAM231DQ6ZW35 169 aa13.81□□□□□ -0.2
PNKP-207ENST00000596014 STARD9Q9P2P6 4700 aa13.8□□□□□ -0.2
PNKP-207ENST00000596014 TENM2Q9NT68 2774 aa13.79□□□□□ -0.2
PNKP-207ENST00000596014 LTAP01374 205 aa13.79□□□□□ -0.2
PNKP-207ENST00000596014 TP53TG3Q9ULZ0 132 aa13.79□□□□□ -0.2
PNKP-207ENST00000596014 C12orf74Q32Q52 190 aa13.79□□□□□ -0.2
PNKP-207ENST00000596014 ZFAND6Q6FIF0 208 aa13.79□□□□□ -0.2
PNKP-207ENST00000596014 FAM159AQ6UWV7 190 aa13.79□□□□□ -0.2
PNKP-207ENST00000596014 TIMM8BQ9Y5J9 83 aaPredicted RBP13.79□□□□□ -0.2
PNKP-207ENST00000596014 TDRG1Q3Y452 100 aa13.78□□□□□ -0.2
PNKP-207ENST00000596014 COX8CQ7Z4L0 72 aa13.78□□□□□ -0.2
PNKP-207ENST00000596014 C11orf72Q8NBR9 251 aa13.78□□□□□ -0.2
PNKP-207ENST00000596014 NAGKQ9UJ70 344 aa13.78□□□□□ -0.2
PNKP-207ENST00000596014 TEX48A0A1B0GUV7 120 aa13.77□□□□□ -0.21
PNKP-207ENST00000596014 LYRM9A8MSI8 78 aa13.77□□□□□ -0.21
PNKP-207ENST00000596014 GATCO43716 136 aaKnown RBP13.77□□□□□ -0.21
PNKP-207ENST00000596014 PRR27Q6MZM9 219 aa13.77□□□□□ -0.21
PNKP-207ENST00000596014 TMEM183AQ8IXX5 376 aa13.77□□□□□ -0.21
PNKP-207ENST00000596014 ZC2HC1AQ96GY0 325 aa13.77□□□□□ -0.21
PNKP-207ENST00000596014 MLST8Q9BVC4 326 aa13.77□□□□□ -0.21
PNKP-207ENST00000596014 NOP10Q9NPE3 64 aaKnown RBP13.77□□□□□ -0.21
PNKP-207ENST00000596014 GSN-AS1Q9NRJ2 163 aa13.77□□□□□ -0.21
PNKP-207ENST00000596014 SNURFLB1AK76 121 aa13.76□□□□□ -0.21
PNKP-207ENST00000596014 HOXA5P20719 270 aa13.76□□□□□ -0.21
PNKP-207ENST00000596014 CASC10Q5T4H9 136 aa13.76□□□□□ -0.21
PNKP-207ENST00000596014 Q6ZTC4 211 aa13.76□□□□□ -0.21
PNKP-207ENST00000596014 C11orf21Q9P2W6 132 aa13.76□□□□□ -0.21
PNKP-207ENST00000596014 DYNC2H1Q8NCM8 4307 aaKnown RBP13.76□□□□□ -0.21
PNKP-207ENST00000596014 SMIM27A0A1W2PRY6 76 aa13.75□□□□□ -0.21
PNKP-207ENST00000596014 FABP5P3A8MUU1 101 aa13.75□□□□□ -0.21
PNKP-207ENST00000596014 CRIP1P50238 77 aa13.75□□□□□ -0.21
PNKP-207ENST00000596014 LINC00518Q8N0U6 118 aa13.75□□□□□ -0.21
PNKP-207ENST00000596014 PHLDA1Q8WV24 401 aaPredicted RBP13.75□□□□□ -0.21
PNKP-207ENST00000596014 TRAPPC1Q9Y5R8 145 aa13.75□□□□□ -0.21
PNKP-207ENST00000596014 S100A8P05109 93 aa13.75□□□□□ -0.21
PNKP-207ENST00000596014 KCNS1Q96KK3 526 aa13.75□□□□□ -0.21
PNKP-207ENST00000596014 GNRH2O43555 120 aa13.74□□□□□ -0.21
PNKP-207ENST00000596014 TCL1AP56279 114 aa13.74□□□□□ -0.21
PNKP-207ENST00000596014 DAZ2Q13117 558 aaKnown RBP13.74□□□□□ -0.21
PNKP-207ENST00000596014 NUDT10Q8NFP7 164 aa13.74□□□□□ -0.21
PNKP-207ENST00000596014 NUDT11Q96G61 164 aa13.74□□□□□ -0.21
PNKP-207ENST00000596014 MDFICQ9P1T7 246 aa13.74□□□□□ -0.21
PNKP-207ENST00000596014 TRGV11A0A075B6L2 103 aa13.73□□□□□ -0.21
PNKP-207ENST00000596014 DEFB130BP0DP73 79 aa13.73□□□□□ -0.21
PNKP-207ENST00000596014 DEFB130AP0DP74 79 aa13.73□□□□□ -0.21
PNKP-207ENST00000596014 DAD1P61803 113 aa13.73□□□□□ -0.21
PNKP-207ENST00000596014 RPL19P84098 196 aaKnown RBP13.73□□□□□ -0.21
PNKP-207ENST00000596014 FAM162BQ5T6X4 162 aa13.73□□□□□ -0.21
PNKP-207ENST00000596014 C19orf71A6NCJ1 209 aa13.72□□□□□ -0.21
PNKP-207ENST00000596014 PLECQ15149 4684 aaKnown RBP13.72□□□□□ -0.21
PNKP-207ENST00000596014 CEMP1Q6PRD7 247 aaPredicted RBP13.72□□□□□ -0.21
PNKP-207ENST00000596014 HIST3H2BBQ8N257 126 aa13.72□□□□□ -0.21
PNKP-207ENST00000596014 RPP21Q9H633 154 aaKnown RBP13.72□□□□□ -0.21
PNKP-207ENST00000596014 SH2D1AO60880 128 aa13.72□□□□□ -0.21
PNKP-207ENST00000596014 ZNF415Q09FC8 603 aa13.72□□□□□ -0.21
PNKP-207ENST00000596014 IGKV3D-20A0A0C4DH25 116 aa13.71□□□□□ -0.21
PNKP-207ENST00000596014 IGHV3-16A0A0C4DH30 117 aa13.71□□□□□ -0.21
PNKP-207ENST00000596014 NUPR2A6NF83 97 aa13.71□□□□□ -0.21
PNKP-207ENST00000596014 IFITM10A6NMD0 228 aa13.71□□□□□ -0.21
PNKP-207ENST00000596014 SMIM6P0DI80 62 aa13.71□□□□□ -0.21
PNKP-207ENST00000596014 COX19Q49B96 90 aa13.71□□□□□ -0.21
PNKP-207ENST00000596014 CT83Q5H943 113 aa13.71□□□□□ -0.21
PNKP-207ENST00000596014 TRAV10A0A0B4J240 114 aa13.7□□□□□ -0.22
PNKP-207ENST00000596014 XKRY2A2RUG3 117 aa13.7□□□□□ -0.22
PNKP-207ENST00000596014 WDR73Q6P4I2 378 aa13.7□□□□□ -0.22
PNKP-207ENST00000596014 Q6ZTI0 123 aa13.7□□□□□ -0.22
PNKP-207ENST00000596014 LINC00612Q8N6U2 182 aa13.7□□□□□ -0.22
PNKP-207ENST00000596014 MRPL18Q9H0U6 180 aaKnown RBP13.7□□□□□ -0.22
PNKP-207ENST00000596014 ORM1P02763 201 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 COA6Q5JTJ3 125 aaKnown RBP13.69□□□□□ -0.22
PNKP-207ENST00000596014 TSKUQ8WUA8 353 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 DEFB131BA0A096LNP1 70 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 GAGE12BA1L429 117 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 SPINK4O60575 86 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 GAGE7O76087 117 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 P01737 135 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 MT-ND6P03923 174 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 GAGE12FP0CL80 117 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 GAGE12GP0CL81 117 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 GAGE12IP0CL82 117 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 GNB1LQ9BYB4 327 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 NAT8BQ9UHF3 227 aa13.69□□□□□ -0.22
PNKP-207ENST00000596014 TRGV1A0A0A0MS02 117 aa13.68□□□□□ -0.22
PNKP-207ENST00000596014 MRPL54Q6P161 138 aaKnown RBP13.68□□□□□ -0.22
PNKP-207ENST00000596014 C12orf57Q99622 126 aa13.68□□□□□ -0.22
PNKP-207ENST00000596014 SPXQ9BT56 116 aa13.68□□□□□ -0.22
PNKP-207ENST00000596014 KLK5Q9Y337 293 aaPredicted RBP13.68□□□□□ -0.22
PNKP-207ENST00000596014 S100A2P29034 98 aa13.67□□□□□ -0.22
PNKP-207ENST00000596014 LGALS9BQ3B8N2 356 aa13.67□□□□□ -0.22
PNKP-207ENST00000596014 PDZD11Q5EBL8 140 aa13.67□□□□□ -0.22
PNKP-207ENST00000596014 TMEM136Q6ZRR5 245 aa13.67□□□□□ -0.22
PNKP-207ENST00000596014 DAZAP1Q96EP5 407 aaKnown RBP13.67□□□□□ -0.22
PNKP-207ENST00000596014 MUC4Q99102 2169 aa13.66□□□□□ -0.22
PNKP-207ENST00000596014 A8MWL6 223 aa13.66□□□□□ -0.22
PNKP-207ENST00000596014 HLA-DQA1P01909 254 aa13.66□□□□□ -0.22
PNKP-207ENST00000596014 HTN3P15516 51 aa13.66□□□□□ -0.22
PNKP-207ENST00000596014 LINC01559Q495D7 138 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms