RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 LOC100131303A0A0U1RQF7 123 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 A0A1B0GVY2 172 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 GRIFINA4D1Z8 144 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 CIDEAO60543 219 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 S100A9P06702 114 aaKnown RBP8.3□□□□□ -1.08
TPM4-212ENST00000590180 RAB5CP51148 216 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 CCL20P78556 96 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 ZNF506Q5JVG8 444 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 NHLRC2Q8NBF2 726 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 PTH2Q96A98 100 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 TXNDC17Q9BRA2 123 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 GNG13Q9P2W3 67 aa8.3□□□□□ -1.08
TPM4-212ENST00000590180 SCO2A0A1W2PP80 73 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 A0A1W2PPQ1 181 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 KRBOX1C9JBD0 128 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 TEX46H3BTG2 121 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 LTAP01374 205 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 C1QBP02746 253 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 GATA1P15976 413 aaPredicted RBP8.29□□□□□ -1.08
TPM4-212ENST00000590180 TNP2Q05952 138 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 AKAP14Q86UN6 197 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 BAGE2Q86Y30 109 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 PRADC1Q9BSG0 188 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 DNAH17Q9UFH2 4485 aa8.29□□□□□ -1.08
TPM4-212ENST00000590180 H3BVH4 76 aa8.28□□□□□ -1.08
TPM4-212ENST00000590180 ARMS2P0C7Q2 107 aa8.28□□□□□ -1.08
TPM4-212ENST00000590180 ZNF674Q2M3X9 581 aa8.28□□□□□ -1.08
TPM4-212ENST00000590180 COX8CQ7Z4L0 72 aa8.28□□□□□ -1.08
TPM4-212ENST00000590180 SH2D6Q7Z4S9 175 aa8.28□□□□□ -1.08
TPM4-212ENST00000590180 SLC51BQ86UW2 128 aa8.28□□□□□ -1.08
TPM4-212ENST00000590180 SLC25A29Q8N8R3 303 aa8.28□□□□□ -1.08
TPM4-212ENST00000590180 KRTAP1-5Q9BYS1 174 aa8.28□□□□□ -1.08
TPM4-212ENST00000590180 IL36BQ9NZH7 164 aa8.28□□□□□ -1.08
TPM4-212ENST00000590180 TRAV9-2A0A087WT02 112 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 TRAV1-1A0A0B4J248 108 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 TRBV6-4A0A1B0GX49 114 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 A8MWV9 139 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 SULT1A2P50226 295 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 DMRTA1Q5VZB9 504 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 SYT8Q8NBV8 401 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 MANBALQ9NQG1 85 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 PHLDA3Q9Y5J5 127 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 DNAH2Q9P225 4427 aa8.27□□□□□ -1.09
TPM4-212ENST00000590180 MGST1P10620 155 aaKnown RBP8.26□□□□□ -1.09
TPM4-212ENST00000590180 RHOHQ15669 191 aa8.26□□□□□ -1.09
TPM4-212ENST00000590180 LINC01559Q495D7 138 aa8.26□□□□□ -1.09
TPM4-212ENST00000590180 DNLZQ5SXM8 178 aa8.26□□□□□ -1.09
TPM4-212ENST00000590180 PARLQ9H300 379 aa8.26□□□□□ -1.09
TPM4-212ENST00000590180 JPT2Q9H910 190 aa8.26□□□□□ -1.09
TPM4-212ENST00000590180 LY96Q9Y6Y9 160 aa8.26□□□□□ -1.09
TPM4-212ENST00000590180 EVI2AP22794 236 aa8.25□□□□□ -1.09
TPM4-212ENST00000590180 PIK3CD-AS1Q5SR53 167 aa8.25□□□□□ -1.09
TPM4-212ENST00000590180 Q6ZSN1 163 aa8.25□□□□□ -1.09
TPM4-212ENST00000590180 WFDC10BQ8IUB3 73 aa8.25□□□□□ -1.09
TPM4-212ENST00000590180 SAMD10Q9BYL1 202 aa8.25□□□□□ -1.09
TPM4-212ENST00000590180 M0R381 172 aa8.24□□□□□ -1.09
TPM4-212ENST00000590180 IFNA1P01562 189 aa8.24□□□□□ -1.09
TPM4-212ENST00000590180 BTF3P20290 206 aaKnown RBP8.24□□□□□ -1.09
TPM4-212ENST00000590180 RPL35P42766 123 aaKnown RBP8.24□□□□□ -1.09
TPM4-212ENST00000590180 LINC00315P59091 139 aa8.24□□□□□ -1.09
TPM4-212ENST00000590180 PRR27Q6MZM9 219 aa8.24□□□□□ -1.09
TPM4-212ENST00000590180 ZFP2Q6ZN57 461 aa8.24□□□□□ -1.09
TPM4-212ENST00000590180 ZNF575Q86XF7 245 aa8.24□□□□□ -1.09
TPM4-212ENST00000590180 ATP6V0E2Q8NHE4 81 aa8.24□□□□□ -1.09
TPM4-212ENST00000590180 MLST8Q9BVC4 326 aa8.24□□□□□ -1.09
TPM4-212ENST00000590180 TNFRSF18Q9Y5U5 241 aa8.24□□□□□ -1.09
TPM4-212ENST00000590180 TRAV8-6A0A0B4J262 113 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 RPL19P84098 196 aaKnown RBP8.23□□□□□ -1.09
TPM4-212ENST00000590180 GAGE1Q13065 139 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 GAGE4Q13068 117 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 GAGE5Q13069 117 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 OR10J3Q5JRS4 329 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 FAM74A4Q5TZK3 123 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 ZFP82Q8N141 532 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 C9orf62Q8N4C0 152 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 DERL1Q9BUN8 251 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 MED9Q9NWA0 146 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 FAT2Q9NYQ8 4349 aa8.23□□□□□ -1.09
TPM4-212ENST00000590180 HECTD4Q9Y4D8 3996 aa8.22□□□□□ -1.09
TPM4-212ENST00000590180 A0A087WWL8 130 aa8.22□□□□□ -1.09
TPM4-212ENST00000590180 RAB19A4D1S5 217 aa8.22□□□□□ -1.09
TPM4-212ENST00000590180 RHODO00212 210 aa8.22□□□□□ -1.09
TPM4-212ENST00000590180 TIRAPP58753 221 aa8.22□□□□□ -1.09
TPM4-212ENST00000590180 SSTP61278 116 aa8.22□□□□□ -1.09
TPM4-212ENST00000590180 C14orf178Q8N769 122 aaPredicted RBP8.22□□□□□ -1.09
TPM4-212ENST00000590180 C11orf52Q96A22 123 aa8.22□□□□□ -1.09
TPM4-212ENST00000590180 DAZAP1Q96EP5 407 aaKnown RBP8.22□□□□□ -1.09
TPM4-212ENST00000590180 SFRP2Q96HF1 295 aa8.22□□□□□ -1.09
TPM4-212ENST00000590180 SCRT2Q9NQ03 307 aa8.22□□□□□ -1.09
TPM4-212ENST00000590180 IGHV3-38A0A0C4DH36 116 aa8.21□□□□□ -1.1
TPM4-212ENST00000590180 MUC21A0A0G2JKD1 596 aa8.21□□□□□ -1.1
TPM4-212ENST00000590180 MUC21A0A140T8X8 626 aa8.21□□□□□ -1.1
TPM4-212ENST00000590180 PDE6DO43924 150 aa8.21□□□□□ -1.1
TPM4-212ENST00000590180 CRYGDP07320 174 aa8.21□□□□□ -1.1
TPM4-212ENST00000590180 MEF2BQ02080 365 aaPredicted RBP8.21□□□□□ -1.1
TPM4-212ENST00000590180 CENPWQ5EE01 88 aa8.21□□□□□ -1.1
TPM4-212ENST00000590180 NFE4Q86UQ8 179 aa8.21□□□□□ -1.1
TPM4-212ENST00000590180 GTSF1LQ9H1H1 148 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms