RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SSTP61278 116 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 DEFB114Q30KQ6 69 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 MUC21Q5SSG8 566 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 ADAMTSL5Q6ZMM2 481 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 MRPL52Q86TS9 123 aaKnown RBP7.75□□□□□ -1.17
VPS25-203ENST00000589520 Q8N976 141 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 OR2K2Q8NGT1 345 aa7.75□□□□□ -1.17
VPS25-203ENST00000589520 TRGV11A0A075B6L2 103 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 IGHV1OR15-1A0A075B7D0 117 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 J3KRW8 73 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 NPYP01303 97 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 HBDP02042 147 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 HLA-DRB4P13762 266 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 EVI2AP22794 236 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
VPS25-203ENST00000589520 C18orf65Q6ZTR6 163 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 POM121L12Q8N7R1 296 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 Q8N8P6 123 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 SYT8Q8NBV8 401 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 AP1S3Q96PC3 154 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 C20orf78Q9BR46 151 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 NDUFAF3Q9BU61 184 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 PRO1933Q9H354 126 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 HLA-DRB4X5D2U9 266 aa7.74□□□□□ -1.17
VPS25-203ENST00000589520 TRAV9-2A0A087WT02 112 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 LOC389332A0A1B0GUA5 103 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 GNRH2O43555 120 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 SMIM17P0DL12 118 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 RNASE3P12724 160 aaKnown RBP7.73□□□□□ -1.17
VPS25-203ENST00000589520 CD33P20138 364 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 G0S2P27469 103 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 DEFB131AP59861 70 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 DEFB1P60022 68 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 DEFB136Q30KP8 78 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 RAX2Q96IS3 184 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 MIEN1Q9BRT3 115 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 ZNF747Q9BV97 191 aa7.73□□□□□ -1.17
VPS25-203ENST00000589520 COL6A5A8TX70 2615 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 TRAV12-3A0A0B4J271 114 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 LINC01549A6NIU2 74 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 H3BMM0 161 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 CD7P09564 240 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 CD28P10747 220 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 FCER1GP30273 86 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 RPL32P62910 135 aaKnown RBP7.72□□□□□ -1.17
VPS25-203ENST00000589520 PIK3CD-AS1Q5SR53 167 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 AMTNQ6UX39 209 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 TMEM61Q8N0U2 210 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 C9orf85Q96MD7 179 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 LINC00467Q9BRT7 94 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 RNF114Q9Y508 228 aa7.72□□□□□ -1.17
VPS25-203ENST00000589520 MAP1AP78559 2803 aaPredicted RBP7.72□□□□□ -1.17
VPS25-203ENST00000589520 ACANP16112 2415 aa7.71□□□□□ -1.17
VPS25-203ENST00000589520 HSBP1L1C9JCN9 74 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 SMKR1H3BMG3 65 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 LY6G6DO95868 133 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 SPATA45Q537H7 98 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 PRR31Q5SQ13 230 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 ZNF705AQ6ZN79 300 aaPredicted RBP7.71□□□□□ -1.18
VPS25-203ENST00000589520 Q6ZQT7 251 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 PTH2Q96A98 100 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 CITED2Q99967 270 aaPredicted RBP7.71□□□□□ -1.18
VPS25-203ENST00000589520 FAM110AQ9BQ89 295 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 TIMM8BQ9Y5J9 83 aaPredicted RBP7.71□□□□□ -1.18
VPS25-203ENST00000589520 VPS13CQ709C8 3753 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 SVEP1Q4LDE5 3571 aa7.71□□□□□ -1.18
VPS25-203ENST00000589520 ZNF469Q96JG9 3925 aaPredicted RBP7.71□□□□□ -1.18
VPS25-203ENST00000589520 IGHV3-16A0A0C4DH30 117 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 CTAG1AP78358 180 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 LAGE3Q14657 143 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 KIR3DS1Q14943 382 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 SPINK13Q1W4C9 94 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 LGALS9BQ3B8N2 356 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 CD300EQ496F6 205 aaPredicted RBP7.7□□□□□ -1.18
VPS25-203ENST00000589520 ORMDL2Q53FV1 153 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 LINC01545Q5VT33 79 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 LGALS9CQ6DKI2 356 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 NRACQ8N912 160 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 MAP6D1Q9H9H5 199 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 PAM16Q9Y3D7 125 aa7.7□□□□□ -1.18
VPS25-203ENST00000589520 JMJD1CQ15652 2540 aa7.69□□□□□ -1.18
VPS25-203ENST00000589520 IGLV2-18A0A075B6J9 118 aa7.69□□□□□ -1.18
VPS25-203ENST00000589520 ATP5LO75964 103 aa7.69□□□□□ -1.18
VPS25-203ENST00000589520 NCR2O95944 276 aa7.69□□□□□ -1.18
VPS25-203ENST00000589520 PROK1P58294 105 aa7.69□□□□□ -1.18
VPS25-203ENST00000589520 NDUFA11Q86Y39 141 aa7.69□□□□□ -1.18
VPS25-203ENST00000589520 C14orf178Q8N769 122 aaPredicted RBP7.69□□□□□ -1.18
VPS25-203ENST00000589520 C14orf144Q96I85 54 aa7.69□□□□□ -1.18
VPS25-203ENST00000589520 ST20Q9HBF5 79 aa7.69□□□□□ -1.18
VPS25-203ENST00000589520 ZNF256Q9Y2P7 627 aaPredicted RBP7.69□□□□□ -1.18
VPS25-203ENST00000589520 SELENOKQ9Y6D0 94 aa7.69□□□□□ -1.18
VPS25-203ENST00000589520 A0A096LNJ9 63 aa7.68□□□□□ -1.18
VPS25-203ENST00000589520 TCAPO15273 167 aa7.68□□□□□ -1.18
VPS25-203ENST00000589520 SUMO2P61956 95 aaKnown RBP7.68□□□□□ -1.18
VPS25-203ENST00000589520 NUTF2P61970 127 aaKnown RBP7.68□□□□□ -1.18
VPS25-203ENST00000589520 IFI27L1Q96BM0 104 aa7.68□□□□□ -1.18
VPS25-203ENST00000589520 DUX3Q96PT4 197 aa7.68□□□□□ -1.18
VPS25-203ENST00000589520 KIF25-AS1Q9Y6Z4 181 aa7.68□□□□□ -1.18
VPS25-203ENST00000589520 TRAV12-2A0A075B6T6 113 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms