RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SFT2D1Q8WV19 159 aa12.08□□□□□ -0.48
TPM4-206ENST00000587201 PTH2Q96A98 100 aa12.08□□□□□ -0.48
TPM4-206ENST00000587201 ZC2HC1AQ96GY0 325 aa12.08□□□□□ -0.48
TPM4-206ENST00000587201 ZFP30Q9Y2G7 519 aa12.08□□□□□ -0.48
TPM4-206ENST00000587201 LY96Q9Y6Y9 160 aa12.08□□□□□ -0.48
TPM4-206ENST00000587201 A0A1B0GV50 99 aa12.07□□□□□ -0.48
TPM4-206ENST00000587201 PAGE4O60829 102 aa12.07□□□□□ -0.48
TPM4-206ENST00000587201 EIF5AP63241 154 aaKnown RBP12.07□□□□□ -0.48
TPM4-206ENST00000587201 SH2D6Q7Z4S9 175 aa12.07□□□□□ -0.48
TPM4-206ENST00000587201 WFDC10BQ8IUB3 73 aa12.07□□□□□ -0.48
TPM4-206ENST00000587201 SLC25A29Q8N8R3 303 aa12.07□□□□□ -0.48
TPM4-206ENST00000587201 TCEAL7Q9BRU2 100 aa12.07□□□□□ -0.48
TPM4-206ENST00000587201 PRADC1Q9BSG0 188 aa12.07□□□□□ -0.48
TPM4-206ENST00000587201 TRAV9-2A0A087WT02 112 aa12.06□□□□□ -0.48
TPM4-206ENST00000587201 B4DEV8 164 aa12.06□□□□□ -0.48
TPM4-206ENST00000587201 PFDN1O60925 122 aa12.06□□□□□ -0.48
TPM4-206ENST00000587201 AKR1C3P42330 323 aa12.06□□□□□ -0.48
TPM4-206ENST00000587201 RHOHQ15669 191 aa12.06□□□□□ -0.48
TPM4-206ENST00000587201 SPATA12Q7Z6I5 190 aa12.06□□□□□ -0.48
TPM4-206ENST00000587201 MBD3L1Q8WWY6 194 aa12.06□□□□□ -0.48
TPM4-206ENST00000587201 TRBV6-4A0A1B0GX49 114 aa12.05□□□□□ -0.48
TPM4-206ENST00000587201 M0R036 132 aa12.05□□□□□ -0.48
TPM4-206ENST00000587201 SH2D1AO60880 128 aa12.05□□□□□ -0.48
TPM4-206ENST00000587201 CRIP1P50238 77 aa12.05□□□□□ -0.48
TPM4-206ENST00000587201 LGALSLQ3ZCW2 172 aaPredicted RBP12.05□□□□□ -0.48
TPM4-206ENST00000587201 TMUB2Q71RG4 321 aa12.05□□□□□ -0.48
TPM4-206ENST00000587201 COX8CQ7Z4L0 72 aa12.05□□□□□ -0.48
TPM4-206ENST00000587201 TRBV6-1A0A0K0K1D8 114 aa12.04□□□□□ -0.48
TPM4-206ENST00000587201 TPT1P13693 172 aaKnown RBP12.04□□□□□ -0.48
TPM4-206ENST00000587201 EVI2AP22794 236 aa12.04□□□□□ -0.48
TPM4-206ENST00000587201 FAM162BQ5T6X4 162 aa12.04□□□□□ -0.48
TPM4-206ENST00000587201 IL36BQ9NZH7 164 aa12.04□□□□□ -0.48
TPM4-206ENST00000587201 TNFRSF18Q9Y5U5 241 aa12.04□□□□□ -0.48
TPM4-206ENST00000587201 A8MWV9 139 aa12.03□□□□□ -0.48
TPM4-206ENST00000587201 KRBOX1C9JBD0 128 aa12.03□□□□□ -0.48
TPM4-206ENST00000587201 H3BVH4 76 aa12.03□□□□□ -0.48
TPM4-206ENST00000587201 LTAP01374 205 aa12.03□□□□□ -0.48
TPM4-206ENST00000587201 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
TPM4-206ENST00000587201 MGST1P10620 155 aaKnown RBP12.03□□□□□ -0.48
TPM4-206ENST00000587201 Q6ZRN7 208 aaPredicted RBP12.03□□□□□ -0.48
TPM4-206ENST00000587201 GRIFINA4D1Z8 144 aa12.02□□□□□ -0.49
TPM4-206ENST00000587201 K7EP13 123 aa12.02□□□□□ -0.49
TPM4-206ENST00000587201 ARMS2P0C7Q2 107 aa12.02□□□□□ -0.49
TPM4-206ENST00000587201 DNAH10OSP0CZ25 163 aa12.02□□□□□ -0.49
TPM4-206ENST00000587201 TIRAPP58753 221 aa12.02□□□□□ -0.49
TPM4-206ENST00000587201 PIK3CD-AS1Q5SR53 167 aa12.02□□□□□ -0.49
TPM4-206ENST00000587201 NFE4Q86UQ8 179 aa12.02□□□□□ -0.49
TPM4-206ENST00000587201 PARLQ9H300 379 aa12.02□□□□□ -0.49
TPM4-206ENST00000587201 TMSB15BA0A087X1C1 80 aa12.01□□□□□ -0.49
TPM4-206ENST00000587201 ZNF674Q2M3X9 581 aa12.01□□□□□ -0.49
TPM4-206ENST00000587201 DNLZQ5SXM8 178 aa12.01□□□□□ -0.49
TPM4-206ENST00000587201 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
TPM4-206ENST00000587201 ZFP2Q6ZN57 461 aa12.01□□□□□ -0.49
TPM4-206ENST00000587201 SYT8Q8NBV8 401 aa12.01□□□□□ -0.49
TPM4-206ENST00000587201 JPT2Q9H910 190 aa12.01□□□□□ -0.49
TPM4-206ENST00000587201 SCO2A0A1W2PP80 73 aa12□□□□□ -0.49
TPM4-206ENST00000587201 S100A9P06702 114 aaKnown RBP12□□□□□ -0.49
TPM4-206ENST00000587201 CRYGDP07320 174 aa12□□□□□ -0.49
TPM4-206ENST00000587201 KRTAP10-2P60368 255 aa12□□□□□ -0.49
TPM4-206ENST00000587201 LINC01559Q495D7 138 aa12□□□□□ -0.49
TPM4-206ENST00000587201 Q6ZSN1 163 aa12□□□□□ -0.49
TPM4-206ENST00000587201 MSRB1Q9NZV6 116 aa12□□□□□ -0.49
TPM4-206ENST00000587201 RYR1P21817 5038 aa12□□□□□ -0.49
TPM4-206ENST00000587201 LRP1BQ9NZR2 4599 aa11.99□□□□□ -0.49
TPM4-206ENST00000587201 TRAV8-6A0A0B4J262 113 aa11.99□□□□□ -0.49
TPM4-206ENST00000587201 IGHV3-38A0A0C4DH36 116 aa11.99□□□□□ -0.49
TPM4-206ENST00000587201 OR10J3Q5JRS4 329 aa11.99□□□□□ -0.49
TPM4-206ENST00000587201 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
TPM4-206ENST00000587201 ATP6V0E2Q8NHE4 81 aa11.99□□□□□ -0.49
TPM4-206ENST00000587201 PHLDA3Q9Y5J5 127 aa11.99□□□□□ -0.49
TPM4-206ENST00000587201 EREGO14944 169 aa11.98□□□□□ -0.49
TPM4-206ENST00000587201 ERVFC1-1P60608 527 aa11.98□□□□□ -0.49
TPM4-206ENST00000587201 SAMD10Q9BYL1 202 aa11.98□□□□□ -0.49
TPM4-206ENST00000587201 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
TPM4-206ENST00000587201 GAGE12JA6NER3 117 aa11.97□□□□□ -0.49
TPM4-206ENST00000587201 GAGE1Q13065 139 aa11.97□□□□□ -0.49
TPM4-206ENST00000587201 GAGE4Q13068 117 aa11.97□□□□□ -0.49
TPM4-206ENST00000587201 GAGE5Q13069 117 aa11.97□□□□□ -0.49
TPM4-206ENST00000587201 GAGE13Q4V321 117 aa11.97□□□□□ -0.49
TPM4-206ENST00000587201 LELP1Q5T871 98 aa11.97□□□□□ -0.49
TPM4-206ENST00000587201 EIF5AL1Q6IS14 154 aaKnown RBP11.97□□□□□ -0.49
TPM4-206ENST00000587201 BAGE2Q86Y30 109 aa11.97□□□□□ -0.49
TPM4-206ENST00000587201 KRTAP17-1Q9BYP8 105 aa11.97□□□□□ -0.49
TPM4-206ENST00000587201 M0R381 172 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 RHODO00212 210 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 RAB5CP51148 216 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 LINC01556Q5JQF7 62 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 UFSP1Q6NVU6 142 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 TCTE3Q8IZS6 198 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 SCRT2Q9NQ03 307 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 MANBALQ9NQG1 85 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 GNG13Q9P2W3 67 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.49
TPM4-206ENST00000587201 CDK2AP2O75956 126 aa11.95□□□□□ -0.5
TPM4-206ENST00000587201 ZFP82Q8N141 532 aa11.95□□□□□ -0.5
TPM4-206ENST00000587201 C14orf178Q8N769 122 aaPredicted RBP11.95□□□□□ -0.5
TPM4-206ENST00000587201 SFRP2Q96HF1 295 aa11.95□□□□□ -0.5
TPM4-206ENST00000587201 DNAH5Q8TE73 4624 aa11.95□□□□□ -0.5
TPM4-206ENST00000587201 A0A087WWL8 130 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms