RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 PCP2Q8IVA1 136 aa11.81□□□□□ -0.52
TVP23C-210ENST00000584811 PHLDA3Q9Y5J5 127 aa11.81□□□□□ -0.52
TVP23C-210ENST00000584811 HELZ2Q9BYK8 2649 aaKnown RBP11.8□□□□□ -0.52
TVP23C-210ENST00000584811 NEGR1Q7Z3B1 354 aa11.8□□□□□ -0.52
TVP23C-210ENST00000584811 Q96MF0 132 aa11.8□□□□□ -0.52
TVP23C-210ENST00000584811 ZNF702PQ9H963 129 aa11.8□□□□□ -0.52
TVP23C-210ENST00000584811 VPREB3Q9UKI3 123 aa11.8□□□□□ -0.52
TVP23C-210ENST00000584811 MGPP08493 103 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 FGF6P10767 208 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 FCER1GP30273 86 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 LGALS9BQ3B8N2 356 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 LGALS9CQ6DKI2 356 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 PRSS1P07477 247 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 COX8AP10176 69 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 BVES-AS1Q5T3Y7 98 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 SMIM15Q7Z3B0 74 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 LENEPQ9Y5L5 61 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 NOTCH3Q9UM47 2321 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 IGHV4-4A0A075B6R2 117 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 ASIPP42127 132 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 NMUP48645 174 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 Q8N8P6 123 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 RASL10AQ92737 203 aa11.79□□□□□ -0.52
TVP23C-210ENST00000584811 NXT2Q9NPJ8 142 aaKnown RBP11.79□□□□□ -0.52
TVP23C-210ENST00000584811 IGKV2D-26A0A0A0MRZ7 120 aa11.78□□□□□ -0.52
TVP23C-210ENST00000584811 SMIM17P0DL12 118 aa11.78□□□□□ -0.52
TVP23C-210ENST00000584811 Q6YL49 198 aa11.78□□□□□ -0.52
TVP23C-210ENST00000584811 FOXC2Q99958 501 aa11.78□□□□□ -0.52
TVP23C-210ENST00000584811 ODF1Q14990 250 aa11.77□□□□□ -0.52
TVP23C-210ENST00000584811 HOXD3P31249 432 aaPredicted RBP11.77□□□□□ -0.53
TVP23C-210ENST00000584811 DEFB113Q30KQ7 82 aa11.77□□□□□ -0.53
TVP23C-210ENST00000584811 C7orf71A4D174 169 aa11.76□□□□□ -0.53
TVP23C-210ENST00000584811 LINC01546A6NGU7 62 aa11.76□□□□□ -0.53
TVP23C-210ENST00000584811 A0A087WWL8 130 aa11.76□□□□□ -0.53
TVP23C-210ENST00000584811 FSHBP01225 129 aa11.76□□□□□ -0.53
TVP23C-210ENST00000584811 SLURP1P55000 103 aa11.76□□□□□ -0.53
TVP23C-210ENST00000584811 KLLNB2CW77 178 aa11.76□□□□□ -0.53
TVP23C-210ENST00000584811 K7EMT4 169 aa11.76□□□□□ -0.53
TVP23C-210ENST00000584811 PRM2P04554 102 aa11.76□□□□□ -0.53
TVP23C-210ENST00000584811 ADAMTSL5Q6ZMM2 481 aa11.76□□□□□ -0.53
TVP23C-210ENST00000584811 SPINK13Q1W4C9 94 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 DPF1Q92782 380 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 JMJD1CQ15652 2540 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 J3QLI3 93 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 CD7P09564 240 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 LAGE3Q14657 143 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 KRTAP1-3Q8IUG1 177 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 MDFICQ9P1T7 246 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 ZNF580Q9UK33 172 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 COX11Q9Y6N1 276 aa11.75□□□□□ -0.53
TVP23C-210ENST00000584811 CCL25O15444 150 aa11.74□□□□□ -0.53
TVP23C-210ENST00000584811 GTSCR1Q86UQ5 136 aa11.74□□□□□ -0.53
TVP23C-210ENST00000584811 APRG1Q8IVJ8 170 aa11.74□□□□□ -0.53
TVP23C-210ENST00000584811 CBY3A6NI87 242 aa11.74□□□□□ -0.53
TVP23C-210ENST00000584811 SMIM2Q9BVW6 85 aa11.73□□□□□ -0.53
TVP23C-210ENST00000584811 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
TVP23C-210ENST00000584811 MRPL35Q9NZE8 188 aaKnown RBP11.73□□□□□ -0.53
TVP23C-210ENST00000584811 PDZD2O15018 2839 aa11.73□□□□□ -0.53
TVP23C-210ENST00000584811 TAX1BP3O14907 124 aa11.73□□□□□ -0.53
TVP23C-210ENST00000584811 LGALS1P09382 135 aaKnown RBP11.73□□□□□ -0.53
TVP23C-210ENST00000584811 FAM159AQ6UWV7 190 aa11.73□□□□□ -0.53
TVP23C-210ENST00000584811 C11orf44Q8N8P7 122 aa11.73□□□□□ -0.53
TVP23C-210ENST00000584811 WFDC11Q8NEX6 87 aa11.73□□□□□ -0.53
TVP23C-210ENST00000584811 ID1P41134 155 aa11.73□□□□□ -0.53
TVP23C-210ENST00000584811 SUMO2P61956 95 aaKnown RBP11.73□□□□□ -0.53
TVP23C-210ENST00000584811 DPH3P1Q9H4G8 78 aa11.73□□□□□ -0.53
TVP23C-210ENST00000584811 KHDC1LQ5JSQ8 128 aa11.72□□□□□ -0.53
TVP23C-210ENST00000584811 HTN1P15515 57 aa11.72□□□□□ -0.53
TVP23C-210ENST00000584811 LINC00315P59091 139 aa11.72□□□□□ -0.53
TVP23C-210ENST00000584811 A0A0J9YX75 114 aa11.71□□□□□ -0.53
TVP23C-210ENST00000584811 K7EP13 123 aa11.71□□□□□ -0.53
TVP23C-210ENST00000584811 K7EQG2 157 aa11.71□□□□□ -0.53
TVP23C-210ENST00000584811 GAGE1Q13065 139 aa11.71□□□□□ -0.53
TVP23C-210ENST00000584811 TCTEX1D4Q5JR98 221 aa11.71□□□□□ -0.53
TVP23C-210ENST00000584811 FAM74A4Q5TZK3 123 aa11.71□□□□□ -0.53
TVP23C-210ENST00000584811 BOD1L2Q8IYS8 172 aa11.71□□□□□ -0.53
TVP23C-210ENST00000584811 NAA38Q9BRA0 125 aaKnown RBP11.71□□□□□ -0.53
TVP23C-210ENST00000584811 NOTCH2Q04721 2471 aa11.71□□□□□ -0.53
TVP23C-210ENST00000584811 KNCNA6PVL3 124 aa11.7□□□□□ -0.54
TVP23C-210ENST00000584811 K7EMI3 77 aa11.7□□□□□ -0.54
TVP23C-210ENST00000584811 MRAP2Q96G30 205 aa11.7□□□□□ -0.54
TVP23C-210ENST00000584811 ZC2HC1BQ5TFG8 222 aa11.7□□□□□ -0.54
TVP23C-210ENST00000584811 MYOZ3Q8TDC0 251 aa11.7□□□□□ -0.54
TVP23C-210ENST00000584811 KIF25-AS1Q9Y6Z4 181 aa11.7□□□□□ -0.54
TVP23C-210ENST00000584811 Q8N1Y9 231 aa11.7□□□□□ -0.54
TVP23C-210ENST00000584811 IGKCP01834 107 aa11.69□□□□□ -0.54
TVP23C-210ENST00000584811 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
TVP23C-210ENST00000584811 UBE2E2Q96LR5 201 aa11.69□□□□□ -0.54
TVP23C-210ENST00000584811 AP1S3Q96PC3 154 aa11.69□□□□□ -0.54
TVP23C-210ENST00000584811 ZMAT4Q9H898 229 aa11.69□□□□□ -0.54
TVP23C-210ENST00000584811 RBMY1A1P0DJD3 496 aaKnown RBP11.69□□□□□ -0.54
TVP23C-210ENST00000584811 RBMY1CP0DJD4 496 aa11.69□□□□□ -0.54
TVP23C-210ENST00000584811 RBMY1FQ15415 496 aaKnown RBP11.69□□□□□ -0.54
TVP23C-210ENST00000584811 C12orf54Q6X4T0 127 aa11.69□□□□□ -0.54
TVP23C-210ENST00000584811 DEFB125Q8N687 156 aa11.69□□□□□ -0.54
TVP23C-210ENST00000584811 CSTL1Q9H114 145 aa11.69□□□□□ -0.54
TVP23C-210ENST00000584811 PRSS47A8MTI9 375 aa11.68□□□□□ -0.54
TVP23C-210ENST00000584811 PTTG1IPP53801 180 aa11.68□□□□□ -0.54
TVP23C-210ENST00000584811 OR11H1Q8NG94 326 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms