RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 LOC100131303A0A0U1RQF7 123 aa14□□□□□ -0.17
SS18-224ENST00000584083 M0R036 132 aa14□□□□□ -0.17
SS18-224ENST00000584083 SH2D1AO60880 128 aa14□□□□□ -0.17
SS18-224ENST00000584083 GATA1P15976 413 aaPredicted RBP14□□□□□ -0.17
SS18-224ENST00000584083 CRIP1P50238 77 aa14□□□□□ -0.17
SS18-224ENST00000584083 FAM162BQ5T6X4 162 aa14□□□□□ -0.17
SS18-224ENST00000584083 TCTE3Q8IZS6 198 aa14□□□□□ -0.17
SS18-224ENST00000584083 NHLRC2Q8NBF2 726 aa14□□□□□ -0.17
SS18-224ENST00000584083 PTH2Q96A98 100 aa14□□□□□ -0.17
SS18-224ENST00000584083 CIDEAO60543 219 aa13.99□□□□□ -0.17
SS18-224ENST00000584083 LGALSLQ3ZCW2 172 aaPredicted RBP13.99□□□□□ -0.17
SS18-224ENST00000584083 EIF5AL1Q6IS14 154 aaKnown RBP13.99□□□□□ -0.17
SS18-224ENST00000584083 COX8CQ7Z4L0 72 aa13.99□□□□□ -0.17
SS18-224ENST00000584083 KRBOX1C9JBD0 128 aa13.98□□□□□ -0.17
SS18-224ENST00000584083 LTAP01374 205 aa13.98□□□□□ -0.17
SS18-224ENST00000584083 SH2D6Q7Z4S9 175 aa13.98□□□□□ -0.17
SS18-224ENST00000584083 SCO2A0A1W2PP80 73 aa13.97□□□□□ -0.17
SS18-224ENST00000584083 H3BVH4 76 aa13.97□□□□□ -0.17
SS18-224ENST00000584083 S100A9P06702 114 aaKnown RBP13.97□□□□□ -0.17
SS18-224ENST00000584083 Q6ZNX1 250 aa13.97□□□□□ -0.17
SS18-224ENST00000584083 SLC25A29Q8N8R3 303 aa13.97□□□□□ -0.17
SS18-224ENST00000584083 PRADC1Q9BSG0 188 aa13.97□□□□□ -0.17
SS18-224ENST00000584083 IL36BQ9NZH7 164 aa13.97□□□□□ -0.17
SS18-224ENST00000584083 GRIFINA4D1Z8 144 aa13.96□□□□□ -0.17
SS18-224ENST00000584083 PKD1P98161 4303 aa13.96□□□□□ -0.18
SS18-224ENST00000584083 TMSB15BA0A087X1C1 80 aa13.95□□□□□ -0.18
SS18-224ENST00000584083 TRBV6-4A0A1B0GX49 114 aa13.95□□□□□ -0.18
SS18-224ENST00000584083 A8MWV9 139 aa13.95□□□□□ -0.18
SS18-224ENST00000584083 BTF3P20290 206 aaKnown RBP13.95□□□□□ -0.18
SS18-224ENST00000584083 RAB5CP51148 216 aa13.95□□□□□ -0.18
SS18-224ENST00000584083 RHOHQ15669 191 aa13.95□□□□□ -0.18
SS18-224ENST00000584083 ZNF674Q2M3X9 581 aa13.95□□□□□ -0.18
SS18-224ENST00000584083 GNG13Q9P2W3 67 aa13.95□□□□□ -0.18
SS18-224ENST00000584083 PKHD1P08F94 4074 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 TRAV9-2A0A087WT02 112 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 C1QBP02746 253 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 ARMS2P0C7Q2 107 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 MGST1P10620 155 aaKnown RBP13.94□□□□□ -0.18
SS18-224ENST00000584083 LINC00315P59091 139 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 PIK3CD-AS1Q5SR53 167 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 DNLZQ5SXM8 178 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 WFDC10BQ8IUB3 73 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 SYT8Q8NBV8 401 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 PARLQ9H300 379 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 LY96Q9Y6Y9 160 aa13.94□□□□□ -0.18
SS18-224ENST00000584083 hCG_2014768A0A024R1R8 64 aa13.93□□□□□ -0.18
SS18-224ENST00000584083 TEX46H3BTG2 121 aa13.93□□□□□ -0.18
SS18-224ENST00000584083 CCL20P78556 96 aa13.93□□□□□ -0.18
SS18-224ENST00000584083 BAGE2Q86Y30 109 aa13.93□□□□□ -0.18
SS18-224ENST00000584083 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
SS18-224ENST00000584083 LINC01559Q495D7 138 aa13.92□□□□□ -0.18
SS18-224ENST00000584083 DMRTA1Q5VZB9 504 aa13.92□□□□□ -0.18
SS18-224ENST00000584083 ZNF575Q86XF7 245 aa13.92□□□□□ -0.18
SS18-224ENST00000584083 PHLDA3Q9Y5J5 127 aa13.92□□□□□ -0.18
SS18-224ENST00000584083 TRAV1-1A0A0B4J248 108 aa13.91□□□□□ -0.18
SS18-224ENST00000584083 EVI2AP22794 236 aa13.91□□□□□ -0.18
SS18-224ENST00000584083 SULT1A2P50226 295 aa13.91□□□□□ -0.18
SS18-224ENST00000584083 ZFP2Q6ZN57 461 aa13.91□□□□□ -0.18
SS18-224ENST00000584083 AKAP14Q86UN6 197 aa13.91□□□□□ -0.18
SS18-224ENST00000584083 SLC51BQ86UW2 128 aa13.91□□□□□ -0.18
SS18-224ENST00000584083 JPT2Q9H910 190 aa13.91□□□□□ -0.18
SS18-224ENST00000584083 MED14OSP0DP75 135 aa13.9□□□□□ -0.18
SS18-224ENST00000584083 TIRAPP58753 221 aa13.9□□□□□ -0.18
SS18-224ENST00000584083 Q6ZSN1 163 aa13.9□□□□□ -0.18
SS18-224ENST00000584083 SAMD10Q9BYL1 202 aa13.9□□□□□ -0.18
SS18-224ENST00000584083 C16orf90A8MZG2 172 aa13.89□□□□□ -0.19
SS18-224ENST00000584083 M0R381 172 aa13.89□□□□□ -0.19
SS18-224ENST00000584083 MLST8Q9BVC4 326 aa13.89□□□□□ -0.19
SS18-224ENST00000584083 TNFRSF18Q9Y5U5 241 aa13.89□□□□□ -0.19
SS18-224ENST00000584083 DNAH10OSP0CZ25 163 aa13.88□□□□□ -0.19
SS18-224ENST00000584083 RPL35P42766 123 aaKnown RBP13.88□□□□□ -0.19
SS18-224ENST00000584083 PRR27Q6MZM9 219 aa13.88□□□□□ -0.19
SS18-224ENST00000584083 ATP6V0E2Q8NHE4 81 aa13.88□□□□□ -0.19
SS18-224ENST00000584083 SCRT2Q9NQ03 307 aa13.88□□□□□ -0.19
SS18-224ENST00000584083 TRAV8-6A0A0B4J262 113 aa13.87□□□□□ -0.19
SS18-224ENST00000584083 K7EP13 123 aa13.87□□□□□ -0.19
SS18-224ENST00000584083 RHODO00212 210 aa13.87□□□□□ -0.19
SS18-224ENST00000584083 RPL19P84098 196 aaKnown RBP13.87□□□□□ -0.19
SS18-224ENST00000584083 OR10J3Q5JRS4 329 aa13.87□□□□□ -0.19
SS18-224ENST00000584083 FAM74A4Q5TZK3 123 aa13.87□□□□□ -0.19
SS18-224ENST00000584083 NFE4Q86UQ8 179 aa13.87□□□□□ -0.19
SS18-224ENST00000584083 ZFP82Q8N141 532 aa13.87□□□□□ -0.19
SS18-224ENST00000584083 IGHV3-38A0A0C4DH36 116 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 GAGE12JA6NER3 117 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 CRYGDP07320 174 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 GAGE1Q13065 139 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 GAGE4Q13068 117 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 GAGE5Q13069 117 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 GAGE13Q4V321 117 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 Q6ZRN7 208 aaPredicted RBP13.86□□□□□ -0.19
SS18-224ENST00000584083 SPATA12Q7Z6I5 190 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 C11orf52Q96A22 123 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 DERL1Q9BUN8 251 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 GTSF1LQ9H1H1 148 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 KIAA1109Q2LD37 5005 aa13.86□□□□□ -0.19
SS18-224ENST00000584083 A0A087WWL8 130 aa13.85□□□□□ -0.19
SS18-224ENST00000584083 IFNA1P01562 189 aa13.85□□□□□ -0.19
SS18-224ENST00000584083 UFSP1Q6NVU6 142 aa13.85□□□□□ -0.19
SS18-224ENST00000584083 C14orf178Q8N769 122 aaPredicted RBP13.85□□□□□ -0.19
SS18-224ENST00000584083 SFRP2Q96HF1 295 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms