RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 TRAV10A0A0B4J240 114 aa8.18□□□□□ -1.1
NUP85-224ENST00000583948 TMEM189A5PLL7 270 aa8.18□□□□□ -1.1
NUP85-224ENST00000583948 GPX1P07203 203 aa8.18□□□□□ -1.1
NUP85-224ENST00000583948 LEPP41159 167 aa8.18□□□□□ -1.1
NUP85-224ENST00000583948 PRR9Q5T870 116 aa8.18□□□□□ -1.1
NUP85-224ENST00000583948 COX8CQ7Z4L0 72 aa8.18□□□□□ -1.1
NUP85-224ENST00000583948 FAM210BQ96KR6 192 aa8.18□□□□□ -1.1
NUP85-224ENST00000583948 FABP5P3A8MUU1 101 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 A8MWL6 223 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 SPINK4O60575 86 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 ORM1P02763 201 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 GZMBP10144 247 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 RAB5AP20339 215 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 RNASE4P34096 147 aaKnown RBP8.17□□□□□ -1.1
NUP85-224ENST00000583948 FUSP35637 526 aaKnown RBP eCLIP8.17□□□□□ -1.1
NUP85-224ENST00000583948 C12orf74Q32Q52 190 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 CT83Q5H943 113 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 C1orf134Q5TEV5 83 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 ZFAND2AQ8N6M9 145 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 TSKUQ8WUA8 353 aa8.17□□□□□ -1.1
NUP85-224ENST00000583948 TRBV24-1A0A075B6N3 115 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 TRAV9-1A0A075B6T8 112 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 DEFB131BA0A096LNP1 70 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 SMIM27A0A1W2PRY6 76 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 XKRY2A2RUG3 117 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 P0DMU3 169 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 FAM231AP0DMU4 169 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 FAM231CP0DMU5 169 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 HLA-DRB4P13762 266 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 RPS10P46783 165 aaKnown RBP8.16□□□□□ -1.1
NUP85-224ENST00000583948 FXYD7P58549 80 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 BTF3L4Q96K17 158 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 FAM19A4Q96LR4 140 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 NEU1Q99519 415 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 NAT8BQ9UHF3 227 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 NAGKQ9UJ70 344 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 HLA-DRB4X5D2U9 266 aa8.16□□□□□ -1.1
NUP85-224ENST00000583948 TRAV21A0A0B4J279 112 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 TRBV7-9A0A0J9YWB2 115 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 HIGD1CA8MV81 97 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 M0R2Z0 102 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 GIG44P09565 113 aaPredicted RBP8.15□□□□□ -1.1
NUP85-224ENST00000583948 CRISP2P16562 243 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 TSPOP30536 169 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 CMC4P56277 68 aaPredicted RBP8.15□□□□□ -1.1
NUP85-224ENST00000583948 RPS20P60866 119 aaKnown RBP8.15□□□□□ -1.1
NUP85-224ENST00000583948 KIR3DS1Q14943 382 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 SPINK13Q1W4C9 94 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.1
NUP85-224ENST00000583948 UBE2DNLQ8IWF7 75 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 PGLYRP4Q96LB8 373 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 ODF3Q96PU9 254 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 TPPP3Q9BW30 176 aa8.15□□□□□ -1.1
NUP85-224ENST00000583948 TRAV12-2A0A075B6T6 113 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 C7orf71A4D174 169 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 GRIFINA4D1Z8 144 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 EPM2AB3EWF7 344 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 H3BMM0 161 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 Q6ZQT7 251 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 SPATA12Q7Z6I5 190 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 STHQ8IWL8 128 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 NUP35Q8NFH5 326 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 GTSF1Q8WW33 167 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 PYGO2Q9BRQ0 406 aa8.14□□□□□ -1.11
NUP85-224ENST00000583948 TRAV12-3A0A0B4J271 114 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 KLLNB2CW77 178 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 AMBPP02760 352 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 CDKN1BP46527 198 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 MUC21Q5SSG8 566 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 GFI1BQ5VTD9 330 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 AMTNQ6UX39 209 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 BORCS7Q96B45 105 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 NDUFAF3Q9BU61 184 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 GFRA4Q9GZZ7 299 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 C11orf21Q9P2W6 132 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 X6R8D5 127 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 HMCN2Q8NDA2 5059 aa8.13□□□□□ -1.11
NUP85-224ENST00000583948 C1orf196B1AJZ1 125 aa8.12□□□□□ -1.11
NUP85-224ENST00000583948 RAB4BP61018 213 aa8.12□□□□□ -1.11
NUP85-224ENST00000583948 Q6AWC8 147 aa8.12□□□□□ -1.11
NUP85-224ENST00000583948 FER1L6-AS1Q8NA97 138 aa8.12□□□□□ -1.11
NUP85-224ENST00000583948 MDFICQ9P1T7 246 aa8.12□□□□□ -1.11
NUP85-224ENST00000583948 IGKV3D-20A0A0C4DH25 116 aa8.11□□□□□ -1.11
NUP85-224ENST00000583948 FAM231BA6NCW3 169 aa8.11□□□□□ -1.11
NUP85-224ENST00000583948 A8MTW9 85 aa8.11□□□□□ -1.11
NUP85-224ENST00000583948 TYMSP04818 313 aa8.11□□□□□ -1.11
NUP85-224ENST00000583948 SSTP61278 116 aa8.11□□□□□ -1.11
NUP85-224ENST00000583948 ANXA2RQ3ZCQ2 193 aa8.11□□□□□ -1.11
NUP85-224ENST00000583948 ZFP82Q8N141 532 aa8.11□□□□□ -1.11
NUP85-224ENST00000583948 FRZBQ92765 325 aa8.11□□□□□ -1.11
NUP85-224ENST00000583948 TIMM8BQ9Y5J9 83 aaPredicted RBP8.11□□□□□ -1.11
NUP85-224ENST00000583948 MUC21A0A0G2JKD1 596 aa8.1□□□□□ -1.11
NUP85-224ENST00000583948 MUC21A0A140T8X8 626 aa8.1□□□□□ -1.11
NUP85-224ENST00000583948 SNURFLB1AK76 121 aa8.1□□□□□ -1.11
NUP85-224ENST00000583948 TRGC2P03986 189 aa8.1□□□□□ -1.11
NUP85-224ENST00000583948 ARMS2P0C7Q2 107 aa8.1□□□□□ -1.11
NUP85-224ENST00000583948 CAMPP49913 170 aa8.1□□□□□ -1.11
NUP85-224ENST00000583948 RAB5BP61020 215 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms