RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 PRNTQ86SH4 94 aa9.26□□□□□ -0.93
SS18-222ENST00000582792 TRAV34A0A0B4J273 112 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 SCO2A0A1W2PP80 73 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 NXPH4O95158 308 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 LTAP01374 205 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 ZNF506Q5JVG8 444 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 Q86TA4 180 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 EIF4E3Q8N5X7 224 aaKnown RBP9.25□□□□□ -0.93
SS18-222ENST00000582792 C11orf72Q8NBR9 251 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 LINC00479Q96M42 142 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 TNFRSF18Q9Y5U5 241 aa9.25□□□□□ -0.93
SS18-222ENST00000582792 IGHV1OR15-1A0A075B7D0 117 aa9.24□□□□□ -0.93
SS18-222ENST00000582792 RBFOX3A6NFN3 312 aa9.24□□□□□ -0.93
SS18-222ENST00000582792 KRTAP10-1P60331 282 aa9.24□□□□□ -0.93
SS18-222ENST00000582792 TDRG1Q3Y452 100 aa9.24□□□□□ -0.93
SS18-222ENST00000582792 NFE4Q86UQ8 179 aa9.24□□□□□ -0.93
SS18-222ENST00000582792 SGK494Q96LW2 274 aa9.24□□□□□ -0.93
SS18-222ENST00000582792 GSN-AS1Q9NRJ2 163 aa9.24□□□□□ -0.93
SS18-222ENST00000582792 ICOSQ9Y6W8 199 aa9.24□□□□□ -0.93
SS18-222ENST00000582792 FLG2Q5D862 2391 aaPredicted RBP9.23□□□□□ -0.93
SS18-222ENST00000582792 A0A087WTM6 91 aa9.23□□□□□ -0.93
SS18-222ENST00000582792 TRGV1A0A0A0MS02 117 aa9.23□□□□□ -0.93
SS18-222ENST00000582792 TMEM250H0YL14 139 aa9.23□□□□□ -0.93
SS18-222ENST00000582792 DNAH10OSP0CZ25 163 aa9.23□□□□□ -0.93
SS18-222ENST00000582792 TMEM183AQ8IXX5 376 aa9.23□□□□□ -0.93
SS18-222ENST00000582792 SMIM12Q96EX1 92 aa9.23□□□□□ -0.93
SS18-222ENST00000582792 FAM210AQ96ND0 272 aa9.23□□□□□ -0.93
SS18-222ENST00000582792 TP53TG3Q9ULZ0 132 aa9.23□□□□□ -0.93
SS18-222ENST00000582792 RGS13O14921 159 aa9.22□□□□□ -0.93
SS18-222ENST00000582792 PAX4O43316 350 aa9.22□□□□□ -0.93
SS18-222ENST00000582792 SPINK4O60575 86 aa9.22□□□□□ -0.93
SS18-222ENST00000582792 GCGP01275 180 aa9.22□□□□□ -0.93
SS18-222ENST00000582792 PFN1P07737 140 aaKnown RBP9.22□□□□□ -0.93
SS18-222ENST00000582792 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
SS18-222ENST00000582792 KCNS1Q96KK3 526 aa9.22□□□□□ -0.93
SS18-222ENST00000582792 C8orf49Q96NF6 230 aa9.22□□□□□ -0.93
SS18-222ENST00000582792 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
SS18-222ENST00000582792 FABP5P3A8MUU1 101 aa9.21□□□□□ -0.94
SS18-222ENST00000582792 RPL35P42766 123 aaKnown RBP9.21□□□□□ -0.94
SS18-222ENST00000582792 TCL1AP56279 114 aa9.21□□□□□ -0.94
SS18-222ENST00000582792 LYPD5Q6UWN5 251 aa9.21□□□□□ -0.94
SS18-222ENST00000582792 FAM159AQ6UWV7 190 aa9.21□□□□□ -0.94
SS18-222ENST00000582792 BAGE2Q86Y30 109 aa9.21□□□□□ -0.94
SS18-222ENST00000582792 SMDT1Q9H4I9 107 aa9.21□□□□□ -0.94
SS18-222ENST00000582792 MED9Q9NWA0 146 aa9.21□□□□□ -0.94
SS18-222ENST00000582792 PRO0255Q9UI72 69 aa9.21□□□□□ -0.94
SS18-222ENST00000582792 TRGV11A0A075B6L2 103 aa9.2□□□□□ -0.94
SS18-222ENST00000582792 TRAV9-2A0A087WT02 112 aa9.2□□□□□ -0.94
SS18-222ENST00000582792 SMR3BP02814 79 aaPredicted RBP9.2□□□□□ -0.94
SS18-222ENST00000582792 ZNF80P51504 273 aaPredicted RBP9.2□□□□□ -0.94
SS18-222ENST00000582792 RAB14P61106 215 aa9.2□□□□□ -0.94
SS18-222ENST00000582792 IGHV3-53P01767 116 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 GCSHP23434 173 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 CRYBA4P53673 196 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 SLAQ13239 276 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 MRPL23Q16540 153 aaKnown RBP9.19□□□□□ -0.94
SS18-222ENST00000582792 ZNF674Q2M3X9 581 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 TOR2AQ5JU69 321 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 FAM162BQ5T6X4 162 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 Q6ZQT7 251 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 ZC2HC1AQ96GY0 325 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 EIF5A2Q9GZV4 153 aaKnown RBP9.19□□□□□ -0.94
SS18-222ENST00000582792 SDF2L1Q9HCN8 221 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 MDFICQ9P1T7 246 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 LY96Q9Y6Y9 160 aa9.19□□□□□ -0.94
SS18-222ENST00000582792 FAM229AH3BQW9 127 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 K7EP13 123 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 CRIP1P50238 77 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 IFITM2Q01629 132 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 ZNF415Q09FC8 603 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 CLLU1Q5K131 121 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 SPXQ9BT56 116 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 DERL1Q9BUN8 251 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 BIN3Q9NQY0 253 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 MSRB1Q9NZV6 116 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 HHLA3Q9XRX5 114 aa9.18□□□□□ -0.94
SS18-222ENST00000582792 C9JCJ5 164 aa9.17□□□□□ -0.94
SS18-222ENST00000582792 GNG4P50150 75 aa9.17□□□□□ -0.94
SS18-222ENST00000582792 FHL2Q14192 279 aa9.17□□□□□ -0.94
SS18-222ENST00000582792 PEA15Q15121 130 aa9.17□□□□□ -0.94
SS18-222ENST00000582792 CENPWQ5EE01 88 aa9.17□□□□□ -0.94
SS18-222ENST00000582792 MUC21Q5SSG8 566 aa9.17□□□□□ -0.94
SS18-222ENST00000582792 DNLZQ5SXM8 178 aa9.17□□□□□ -0.94
SS18-222ENST00000582792 NEGR1Q7Z3B1 354 aa9.17□□□□□ -0.94
SS18-222ENST00000582792 MRPL16Q9NX20 251 aaKnown RBP9.17□□□□□ -0.94
SS18-222ENST00000582792 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
SS18-222ENST00000582792 IGHV3-16A0A0C4DH30 117 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 SH2D1AO60880 128 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 IGLV2-8P01709 118 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 TYMSP04818 313 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 SRP19P09132 144 aaKnown RBP9.16□□□□□ -0.94
SS18-222ENST00000582792 CXCL1P09341 107 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 LINC01559Q495D7 138 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 Q6ZSN1 163 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 PCNPQ8WW12 178 aaKnown RBP9.16□□□□□ -0.94
SS18-222ENST00000582792 PARLQ9H300 379 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 NAGKQ9UJ70 344 aa9.16□□□□□ -0.94
SS18-222ENST00000582792 IGKV3D-20A0A0C4DH25 116 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 406 ms