RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 NUPR1O60356 82 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 OR5AL1P0C617 328 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 IGHV4-30-4P0DP06 118 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 EVI2AP22794 236 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 SRIP30626 198 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 RAB5BP61020 215 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 TDRG1Q3Y452 100 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 MRPL51Q4U2R6 128 aaKnown RBP4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 PDZD11Q5EBL8 140 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 SAMD5Q5TGI4 173 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 SPANXN1Q5VSR9 72 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 ATP5L2Q7Z4Y8 100 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 TMEM256Q8N2U0 113 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 GATD1Q8NB37 220 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 C11orf72Q8NBR9 251 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 CSNK1G2-AS1Q8NCQ2 148 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 CLUHP3Q96NS8 147 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 CNFNQ9BYD5 112 aa4.45□□□□□ -1.7
RNU4ATAC-201ENST00000580972 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 LOC102724200A0A096LPH7 203 aaPredicted RBP4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 IGHV3-73A0A0B4J1V6 119 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 LOC105371267A0A1B0GV96 52 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 PLAC8L1A1L4L8 177 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 IFITM10A6NMD0 228 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 DEFB4AO15263 64 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 NXPH4O95158 308 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 HLA-DQA1P01909 254 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 MGPP08493 103 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 CMC4P56277 68 aaPredicted RBP4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 EGFEM1PQ0D2K5 195 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 DNLZQ5SXM8 178 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 FAM104BQ5XKR9 115 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 WDR73Q6P4I2 378 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 C14orf178Q8N769 122 aaPredicted RBP4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 BORCS7Q96B45 105 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 RCHY1Q96PM5 261 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 ALKBH7Q9BT30 221 aaPredicted RBP4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 TMEM208Q9BTX3 173 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 CSTL1Q9H114 145 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 PHLDA3Q9Y5J5 127 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 TRRAPQ9Y4A5 3859 aa4.44□□□□□ -1.7
RNU4ATAC-201ENST00000580972 IGHV4-4A0A075B6R2 117 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 D6R8Y8 96 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 NPYP01303 97 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 AMBPP02760 352 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 MED14OSP0DP75 135 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 RAB4AP20338 218 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 EMP1P54849 157 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 LINC00315P59091 139 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 DEFB135Q30KP9 77 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 RASL11AQ6T310 242 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 ZNF493Q6ZR52 646 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 IL17DQ8TAD2 202 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 RNASE8Q8TDE3 154 aaKnown RBP4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 DEFB104AQ8WTQ1 72 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 URB1-AS1Q96HZ7 61 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 KCNS1Q96KK3 526 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 LINC00467Q9BRT7 94 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 GOLT1BQ9Y3E0 138 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 KIF25-AS1Q9Y6Z4 181 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 X6R8D5 127 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 NOTCH3Q9UM47 2321 aa4.43□□□□□ -1.7
RNU4ATAC-201ENST00000580972 NIPBLQ6KC79 2804 aaeCLIP4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 SERF1AO75920 110 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 IGHV3-53P01767 116 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 MT-ND6P03923 174 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 P0DMU3 169 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 FAM231AP0DMU4 169 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 FAM231CP0DMU5 169 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 NUTF2P61970 127 aaKnown RBP4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 CACNG7P62955 275 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 ZNF415Q09FC8 603 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 FAM74A4Q5TZK3 123 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 MORN3Q6PF18 240 aaPredicted RBP4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 ZNF705AQ6ZN79 300 aaPredicted RBP4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 Q6ZSN1 163 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 Q6ZTI0 123 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 NEGR1Q7Z3B1 354 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 POM121L12Q8N7R1 296 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 C18orf32Q8TCD1 76 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 RPL39LQ96EH5 51 aaKnown RBP4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 TMEM191AQ9H0A3 160 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 NOP10Q9NPE3 64 aaKnown RBP4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 Q9UF83 564 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 U3KQK5 164 aa4.42□□□□□ -1.7
RNU4ATAC-201ENST00000580972 ANK2Q01484 3957 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 TRGV1A0A0A0MS02 117 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 LOC389332A0A1B0GUA5 103 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 A0A1B0GW15 77 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 C5orf52A6NGY3 159 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 K7EIL1 84 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 CRYGDP07320 174 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 PMCHL1Q16048 86 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 ZNF876PQ49A33 203 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 SUMO4Q6EEV6 95 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 HIST3H2BBQ8N257 126 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 NRACQ8N912 160 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 RASL10AQ92737 203 aa4.41□□□□□ -1.7
RNU4ATAC-201ENST00000580972 PRELID3AQ96N28 172 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms