RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CBY1Q9Y3M2 126 aa10.21□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CMYA5Q8N3K9 4069 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TRPT1Q86TN4 253 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 DEFB125Q8N687 156 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CLUHP3Q96NS8 147 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 UQCR10Q9UDW1 63 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 PKD1L1Q8TDX9 2849 aa10.2□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TRAV12-2A0A075B6T6 113 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 ZNF324O75467 553 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CA1P00915 261 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 Q6ZQT7 251 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 OR2D3Q8NGH3 330 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TRAV21A0A0B4J279 112 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 C7orf71A4D174 169 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 IGLC3P0DOY3 106 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 KRTDAPP60985 99 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 Q6AWC8 147 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 NIT1Q86X76 327 aa10.19□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TMEM189A5PLL7 270 aa10.18□□□□□ -0.78
CDK5RAP3-219ENST00000580670 ORM1P02763 201 aa10.18□□□□□ -0.78
CDK5RAP3-219ENST00000580670 SPATA45Q537H7 98 aa10.18□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TMSB15BA0A087X1C1 80 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TRAV12-3A0A0B4J271 114 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 RPL35AP18077 110 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 AMTP48728 403 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 EGFEM1PQ0D2K5 195 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CT83Q5H943 113 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 Q8N1Y9 231 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 C11orf21Q9P2W6 132 aa10.17□□□□□ -0.78
CDK5RAP3-219ENST00000580670 C20orf202A1L168 122 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 A8MWL6 223 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 G3V4G9 280 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 C3orf79P0CE67 100 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 KRTAP10-11P60412 298 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TSKUQ8WUA8 353 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 RCHY1Q96PM5 261 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 CRXO43186 299 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 APCSP02743 223 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 SRIP30626 198 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 TCL1AP56279 114 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 PMCHL1Q16048 86 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 LINC01559Q495D7 138 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 ORAOV1Q8WV07 137 aa10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 MRPS16Q9Y3D3 137 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-219ENST00000580670 IGKV3D-20A0A0C4DH25 116 aa10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 RPS20P60866 119 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 MUC21Q5SSG8 566 aa10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 XCL2Q9UBD3 114 aa10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 LAMTOR2Q9Y2Q5 125 aa10.15□□□□□ -0.78
CDK5RAP3-219ENST00000580670 KIAA1644Q3SXP7 199 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 SAMD5Q5TGI4 173 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 INSP01308 110 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 BATFQ16520 125 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ANXA2RQ3ZCQ2 193 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 MORN3Q6PF18 240 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 STPG4Q8N801 248 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 C18orf32Q8TCD1 76 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 GTSF1Q8WW33 167 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 BORCS7Q96B45 105 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 GFRA4Q9GZZ7 299 aa10.14□□□□□ -0.79
CDK5RAP3-219ENST00000580670 HIGD1CA8MV81 97 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 RBMY1A1P0DJD3 496 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 RBMY1CP0DJD4 496 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 PMCHP20382 165 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 HNRNPA3P51991 378 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 RBMY1FQ15415 496 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FAM159AQ6UWV7 190 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 Q6ZN92 141 aa10.13□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FAM231BA6NCW3 169 aa10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 SPINK4O60575 86 aa10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 KRTAP21-3Q3LHN1 58 aa10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ZNF575Q86XF7 245 aa10.12□□□□□ -0.79
CDK5RAP3-219ENST00000580670 GIG44P09565 113 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 SLAQ13239 276 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 NUP35Q8NFH5 326 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 PGLYRP4Q96LB8 373 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 TPPP3Q9BW30 176 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 TRAV9-2A0A087WT02 112 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 LOC102724200A0A096LPH7 203 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ATP5L2Q7Z4Y8 100 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
CDK5RAP3-219ENST00000580670 GNRH2O43555 120 aa10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 IGHV4-30-4P0DP06 118 aa10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FOXA3P55318 350 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 LINC01587Q99440 93 aa10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ALKBH7Q9BT30 221 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-219ENST00000580670 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 HTN1P15515 57 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 ASIPP42127 132 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 FAM19A2Q8N3H0 131 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 IGHV3OR16-12A0A075B7B8 117 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 A0A1B0GXF2 115 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 LYZL1Q6UWQ5 148 aa10.09□□□□□ -0.79
CDK5RAP3-219ENST00000580670 C1orf158Q8N1D5 194 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms