RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 NDUFS6O75380 124 aaKnown RBP6.62□□□□□ -1.35
GGA3-206ENST00000578773 RAB5CP51148 216 aa6.62□□□□□ -1.35
GGA3-206ENST00000578773 ZNF80P51504 273 aaPredicted RBP6.62□□□□□ -1.35
GGA3-206ENST00000578773 LINC01547P58512 204 aaPredicted RBP6.62□□□□□ -1.35
GGA3-206ENST00000578773 IL18Q14116 193 aa6.62□□□□□ -1.35
GGA3-206ENST00000578773 MIR17HGQ75NE6 70 aa6.62□□□□□ -1.35
GGA3-206ENST00000578773 C15orf56Q8N910 161 aa6.62□□□□□ -1.35
GGA3-206ENST00000578773 SMIM8Q96KF7 97 aa6.62□□□□□ -1.35
GGA3-206ENST00000578773 TRAV21A0A0B4J279 112 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 PIGBOS1A0A0B4J2F0 54 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 CTDSP2O14595 271 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 MRPS10P82664 201 aaKnown RBP6.61□□□□□ -1.35
GGA3-206ENST00000578773 TMEM128Q5BJH2 165 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 OR1L4Q8NGR5 311 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 FXYD5Q96DB9 178 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 ATP5SQ99766 215 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 BCL7BQ9BQE9 202 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 VCX3AQ9NNX9 186 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 SLC39A9Q9NUM3 307 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 AP5S1Q9NUS5 200 aa6.61□□□□□ -1.35
GGA3-206ENST00000578773 SSPOA2VEC9 5147 aa6.6□□□□□ -1.35
GGA3-206ENST00000578773 RBAKDNA6NC62 111 aa6.6□□□□□ -1.35
GGA3-206ENST00000578773 MBPP02686 304 aaPredicted RBP6.6□□□□□ -1.35
GGA3-206ENST00000578773 NBEAP1P0C6P0 100 aa6.6□□□□□ -1.35
GGA3-206ENST00000578773 SMIM18P0DKX4 95 aa6.6□□□□□ -1.35
GGA3-206ENST00000578773 FGF8P55075 233 aaPredicted RBP6.6□□□□□ -1.35
GGA3-206ENST00000578773 UBE2D3P61077 147 aa6.6□□□□□ -1.35
GGA3-206ENST00000578773 UBE2D2P62837 147 aa6.6□□□□□ -1.35
GGA3-206ENST00000578773 HIGD2BQ4VC39 106 aa6.6□□□□□ -1.35
GGA3-206ENST00000578773 ZFP2Q6ZN57 461 aa6.6□□□□□ -1.35
GGA3-206ENST00000578773 Q6ZRG5 221 aa6.6□□□□□ -1.35
GGA3-206ENST00000578773 NAA50Q9GZZ1 169 aaKnown RBP6.6□□□□□ -1.35
GGA3-206ENST00000578773 TRBV6-8A0A0A6YYG3 113 aa6.59□□□□□ -1.35
GGA3-206ENST00000578773 SFT2D2O95562 160 aa6.59□□□□□ -1.35
GGA3-206ENST00000578773 RBX1P62877 108 aa6.59□□□□□ -1.35
GGA3-206ENST00000578773 PPP1R1AQ13522 171 aa6.59□□□□□ -1.35
GGA3-206ENST00000578773 LGALSLQ3ZCW2 172 aaPredicted RBP6.59□□□□□ -1.35
GGA3-206ENST00000578773 PFDN5Q99471 154 aa6.59□□□□□ -1.35
GGA3-206ENST00000578773 A0A087WXM4 84 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 SCGB1D2O95969 90 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 PTTG1O95997 202 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 IFNA7P01567 189 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 RANP62826 216 aaKnown RBP6.58□□□□□ -1.36
GGA3-206ENST00000578773 GAGE6Q13070 117 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 PTH2Q96A98 100 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 DIRAS2Q96HU8 199 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 KCNS1Q96KK3 526 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 SGK494Q96LW2 274 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 CHCHD5Q9BSY4 110 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 LENEPQ9Y5L5 61 aa6.58□□□□□ -1.36
GGA3-206ENST00000578773 ATP6V1G2O95670 118 aa6.57□□□□□ -1.36
GGA3-206ENST00000578773 RPS10P46783 165 aaKnown RBP6.57□□□□□ -1.36
GGA3-206ENST00000578773 CTF1Q16619 201 aa6.57□□□□□ -1.36
GGA3-206ENST00000578773 FAM74A4Q5TZK3 123 aa6.57□□□□□ -1.36
GGA3-206ENST00000578773 NTM-AS1Q6ZSK4 140 aa6.57□□□□□ -1.36
GGA3-206ENST00000578773 C12orf45Q8N5I9 185 aaPredicted RBP6.57□□□□□ -1.36
GGA3-206ENST00000578773 SUN5Q8TC36 379 aa6.57□□□□□ -1.36
GGA3-206ENST00000578773 HYLS1Q96M11 299 aa6.57□□□□□ -1.36
GGA3-206ENST00000578773 RETNLBQ9BQ08 111 aa6.57□□□□□ -1.36
GGA3-206ENST00000578773 WDR83OSQ9Y284 106 aa6.57□□□□□ -1.36
GGA3-206ENST00000578773 UBE2L5PA0A1B0GUS4 154 aa6.56□□□□□ -1.36
GGA3-206ENST00000578773 A8MWV9 139 aa6.56□□□□□ -1.36
GGA3-206ENST00000578773 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
GGA3-206ENST00000578773 RPL29P47914 159 aaKnown RBP6.56□□□□□ -1.36
GGA3-206ENST00000578773 C1orf137Q5JT78 98 aa6.56□□□□□ -1.36
GGA3-206ENST00000578773 MCFD2Q8NI22 146 aa6.56□□□□□ -1.36
GGA3-206ENST00000578773 TREM1Q9NP99 234 aa6.56□□□□□ -1.36
GGA3-206ENST00000578773 IGLV1-50A0A075B6I6 118 aa6.55□□□□□ -1.36
GGA3-206ENST00000578773 A0A1W2PNN7 141 aa6.55□□□□□ -1.36
GGA3-206ENST00000578773 TSC22D2O75157 780 aa6.55□□□□□ -1.36
GGA3-206ENST00000578773 CSN1S1P47710 185 aa6.55□□□□□ -1.36
GGA3-206ENST00000578773 GNG5P63218 68 aa6.55□□□□□ -1.36
GGA3-206ENST00000578773 REG3AQ06141 175 aa6.55□□□□□ -1.36
GGA3-206ENST00000578773 LCE2CQ5TA81 110 aa6.55□□□□□ -1.36
GGA3-206ENST00000578773 GOLT1AQ6ZVE7 132 aa6.55□□□□□ -1.36
GGA3-206ENST00000578773 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
GGA3-206ENST00000578773 USH2AO75445 5202 aa6.54□□□□□ -1.36
GGA3-206ENST00000578773 C7orf66A4D0T2 115 aa6.54□□□□□ -1.36
GGA3-206ENST00000578773 H0Y9J4 135 aa6.54□□□□□ -1.36
GGA3-206ENST00000578773 CST7O76096 145 aa6.54□□□□□ -1.36
GGA3-206ENST00000578773 MT-ND6P03923 174 aa6.54□□□□□ -1.36
GGA3-206ENST00000578773 BAXQ07812 192 aa6.54□□□□□ -1.36
GGA3-206ENST00000578773 TMED6Q8WW62 240 aa6.54□□□□□ -1.36
GGA3-206ENST00000578773 GGACTQ9BVM4 153 aa6.54□□□□□ -1.36
GGA3-206ENST00000578773 GSKIPQ9P0R6 139 aa6.54□□□□□ -1.36
GGA3-206ENST00000578773 C20orf203Q8NBC4 194 aa6.53□□□□□ -1.36
GGA3-206ENST00000578773 LINC00526Q96FQ7 95 aa6.53□□□□□ -1.36
GGA3-206ENST00000578773 IGLV4-60A0A075B6I1 120 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 TRBV7-3A0A075B6L6 115 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 IGKV3D-20A0A0C4DH25 116 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 C9orf170A2RU37 121 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 FGF7P21781 194 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 FAUP35544 74 aaKnown RBP6.52□□□□□ -1.37
GGA3-206ENST00000578773 BCAP31P51572 246 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
GGA3-206ENST00000578773 CYCSP99999 105 aaKnown RBP6.52□□□□□ -1.37
GGA3-206ENST00000578773 PRR27Q6MZM9 219 aa6.52□□□□□ -1.37
GGA3-206ENST00000578773 PHF5AQ7RTV0 110 aaKnown RBP6.52□□□□□ -1.37
GGA3-206ENST00000578773 FER1L6-AS1Q8NA97 138 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms