RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 PRSS29PA6NIE9 313 aa13□□□□□ -0.33
TOM1L1-221ENST00000575882 IGHV3-11P01762 117 aa13□□□□□ -0.33
TOM1L1-221ENST00000575882 MED14OSP0DP75 135 aa13□□□□□ -0.33
TOM1L1-221ENST00000575882 FAM19A4Q96LR4 140 aa13□□□□□ -0.33
TOM1L1-221ENST00000575882 PRADC1Q9BSG0 188 aa13□□□□□ -0.33
TOM1L1-221ENST00000575882 A0A1B0GWB2 263 aa13□□□□□ -0.33
TOM1L1-221ENST00000575882 RNASE3P12724 160 aaKnown RBP13□□□□□ -0.33
TOM1L1-221ENST00000575882 IGF2RP11717 2491 aa12.99□□□□□ -0.33
TOM1L1-221ENST00000575882 SPTBN1Q01082 2364 aaKnown RBP12.99□□□□□ -0.33
TOM1L1-221ENST00000575882 SCGB2A2Q13296 93 aa12.99□□□□□ -0.33
TOM1L1-221ENST00000575882 IGHV1-69DA0A0B4J2H0 117 aa12.98□□□□□ -0.33
TOM1L1-221ENST00000575882 IGHV1-69P01742 117 aa12.98□□□□□ -0.33
TOM1L1-221ENST00000575882 COL6A6A6NMZ7 2263 aa12.97□□□□□ -0.33
TOM1L1-221ENST00000575882 ZNF815PA8K554 130 aa12.97□□□□□ -0.33
TOM1L1-221ENST00000575882 PPP1R17O96001 155 aa12.97□□□□□ -0.33
TOM1L1-221ENST00000575882 LCNL1Q6ZST4 164 aa12.97□□□□□ -0.33
TOM1L1-221ENST00000575882 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
TOM1L1-221ENST00000575882 MTURNQ8N3F0 131 aa12.97□□□□□ -0.33
TOM1L1-221ENST00000575882 LY6EQ16553 131 aa12.97□□□□□ -0.33
TOM1L1-221ENST00000575882 SH2D6Q7Z4S9 175 aa12.97□□□□□ -0.33
TOM1L1-221ENST00000575882 DUSP14O95147 198 aaKnown RBP12.96□□□□□ -0.33
TOM1L1-221ENST00000575882 ETDBQ3ZM63 59 aa12.96□□□□□ -0.33
TOM1L1-221ENST00000575882 GAGE13Q4V321 117 aa12.96□□□□□ -0.33
TOM1L1-221ENST00000575882 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.34
TOM1L1-221ENST00000575882 MORN3Q6PF18 240 aaPredicted RBP12.96□□□□□ -0.34
TOM1L1-221ENST00000575882 USMG5Q96IX5 58 aa12.96□□□□□ -0.34
TOM1L1-221ENST00000575882 CLUHP3Q96NS8 147 aa12.96□□□□□ -0.34
TOM1L1-221ENST00000575882 RHPN1-AS1Q9BWJ2 59 aa12.96□□□□□ -0.34
TOM1L1-221ENST00000575882 SCGB1D4Q6XE38 83 aa12.95□□□□□ -0.34
TOM1L1-221ENST00000575882 PF4V1P10720 104 aa12.95□□□□□ -0.34
TOM1L1-221ENST00000575882 SAMD13Q5VXD3 122 aa12.95□□□□□ -0.34
TOM1L1-221ENST00000575882 POM121L12Q8N7R1 296 aa12.95□□□□□ -0.34
TOM1L1-221ENST00000575882 DEFB104AQ8WTQ1 72 aa12.95□□□□□ -0.34
TOM1L1-221ENST00000575882 PLEKHB2Q96CS7 222 aa12.95□□□□□ -0.34
TOM1L1-221ENST00000575882 TSSC4Q9Y5U2 329 aaPredicted RBP12.95□□□□□ -0.34
TOM1L1-221ENST00000575882 AKAP6Q13023 2319 aa12.95□□□□□ -0.34
TOM1L1-221ENST00000575882 J3QR89 54 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 NXPH4O95158 308 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 CRYGDP07320 174 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 COX6B1P14854 86 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 SRD5A1P18405 259 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 PRO0461Q9UI25 63 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 IGHV4-39P01824 125 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 LINC00315P59091 139 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 GTSF1LQ9H1H1 148 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 TP53TG1Q9Y2A0 90 aa12.94□□□□□ -0.34
TOM1L1-221ENST00000575882 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
TOM1L1-221ENST00000575882 H3BUA1 57 aa12.93□□□□□ -0.34
TOM1L1-221ENST00000575882 TSHBP01222 138 aa12.93□□□□□ -0.34
TOM1L1-221ENST00000575882 IGHG2P01859 326 aa12.93□□□□□ -0.34
TOM1L1-221ENST00000575882 EMP1P54849 157 aa12.93□□□□□ -0.34
TOM1L1-221ENST00000575882 KLHL30-AS1Q8NEE0 82 aa12.93□□□□□ -0.34
TOM1L1-221ENST00000575882 JPT2Q9H910 190 aa12.93□□□□□ -0.34
TOM1L1-221ENST00000575882 MRPL16Q9NX20 251 aaKnown RBP12.93□□□□□ -0.34
TOM1L1-221ENST00000575882 C11orf86A6NJI1 115 aa12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 AZU1P20160 251 aa12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 SRSF9Q13242 221 aaKnown RBP eCLIP12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 SPAG8Q99932 426 aaPredicted RBP12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 ZFHX3Q15911 3703 aa12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 IGLV4-69A0A075B6H9 119 aa12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 A6NJY4 79 aa12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 IGHV4-38-2P0DP08 117 aa12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 FAM159AQ6UWV7 190 aa12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 SIGMAR1Q99720 223 aa12.92□□□□□ -0.34
TOM1L1-221ENST00000575882 MUC4Q99102 2169 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 IGHV4OR15-8A0A075B7B6 117 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 A0A087WW49 117 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 GAGE12HA6NDE8 117 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 KLLNB2CW77 178 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 H3BUX3 64 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 C19orf84I3L1E1 186 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 SUMO4Q6EEV6 95 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 ZFP2Q6ZN57 461 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 WFDC12Q8WWY7 111 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 DAZ1Q9NQZ3 744 aaKnown RBP12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 ABCA2Q9BZC7 2435 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 HIVEP3Q5T1R4 2406 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 IGIPA6NJ69 53 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 BRI3O95415 125 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 EDN2P20800 178 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 BLCAPP62952 87 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 Q6ZS46 218 aa12.91□□□□□ -0.34
TOM1L1-221ENST00000575882 A0A087WWL8 130 aa12.9□□□□□ -0.34
TOM1L1-221ENST00000575882 LINC01549A6NIU2 74 aa12.9□□□□□ -0.34
TOM1L1-221ENST00000575882 RPL39P62891 51 aaKnown RBP12.9□□□□□ -0.34
TOM1L1-221ENST00000575882 RPL32P62910 135 aaKnown RBP12.9□□□□□ -0.34
TOM1L1-221ENST00000575882 IGHV4-61A0A0C4DH41 118 aa12.9□□□□□ -0.34
TOM1L1-221ENST00000575882 POLR2KP53803 58 aaKnown RBP12.9□□□□□ -0.34
TOM1L1-221ENST00000575882 F5H697 171 aa12.89□□□□□ -0.35
TOM1L1-221ENST00000575882 UBE2D1P51668 147 aa12.89□□□□□ -0.35
TOM1L1-221ENST00000575882 HERVK_113P61574 105 aa12.89□□□□□ -0.35
TOM1L1-221ENST00000575882 SMAGPQ0VAQ4 97 aa12.89□□□□□ -0.35
TOM1L1-221ENST00000575882 PMVKQ15126 192 aa12.89□□□□□ -0.35
TOM1L1-221ENST00000575882 A6NDX4 124 aa12.89□□□□□ -0.35
TOM1L1-221ENST00000575882 CD7P09564 240 aa12.89□□□□□ -0.35
TOM1L1-221ENST00000575882 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
TOM1L1-221ENST00000575882 KIR2DL4Q99706 377 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms