RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 WISP1O95388 367 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 MRPL53Q96EL3 112 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 FBLN5Q9UBX5 448 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 SND1-IT1Q9HBX3 110 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 A0A087WZ39 114 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 SRSF2Q01130 221 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 IGKV1D-17A0A075B6S4 117 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 TRBV10-2A0A0K0K1G8 114 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 IGKV1-12A0A0C4DH73 117 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 LCTP09848 1927 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 MST1P26927 711 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 TMEM75Q8N9X5 138 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 SHISA3A0PJX4 238 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 IGKV1D-37A0A075B6S9 117 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 CENPVL3A0A0U1RRI6 287 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 DEFB135Q30KP9 77 aa12.59□□□□□ -0.39
CACNA1A-202ENST00000573710 UBE2D3P61077 147 aa12.58□□□□□ -0.4
CACNA1A-202ENST00000573710 SHANK2-AS3Q9BTD1 123 aa12.58□□□□□ -0.4
CACNA1A-202ENST00000573710 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-202ENST00000573710 A6NED7 52 aa12.58□□□□□ -0.4
CACNA1A-202ENST00000573710 Q8N8P6 123 aa12.58□□□□□ -0.4
CACNA1A-202ENST00000573710 CYYR1Q96J86 154 aa12.58□□□□□ -0.4
CACNA1A-202ENST00000573710 CCL25O15444 150 aa12.57□□□□□ -0.4
CACNA1A-202ENST00000573710 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
CACNA1A-202ENST00000573710 NRGNQ92686 78 aa12.57□□□□□ -0.4
CACNA1A-202ENST00000573710 RETNLBQ9BQ08 111 aa12.57□□□□□ -0.4
CACNA1A-202ENST00000573710 ZNF581Q9P0T4 197 aa12.57□□□□□ -0.4
CACNA1A-202ENST00000573710 OPRPNQ99935 248 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-202ENST00000573710 KLK12Q9UKR0 248 aa12.57□□□□□ -0.4
CACNA1A-202ENST00000573710 M0R2N4 97 aa12.57□□□□□ -0.4
CACNA1A-202ENST00000573710 DEFB112Q30KQ8 113 aa12.56□□□□□ -0.4
CACNA1A-202ENST00000573710 IGLV3-21P80748 117 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-202ENST00000573710 TAX1BP3O14907 124 aa12.56□□□□□ -0.4
CACNA1A-202ENST00000573710 LY96Q9Y6Y9 160 aa12.56□□□□□ -0.4
CACNA1A-202ENST00000573710 COL4A1P02462 1669 aa12.56□□□□□ -0.4
CACNA1A-202ENST00000573710 FGF16O43320 207 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 ZNF362Q5T0B9 420 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 LAIR2Q6ISS4 152 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 A0A0B4J2C4 111 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 SIGLEC8Q9NYZ4 499 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 CRYGBP07316 175 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 POLR3KQ9Y2Y1 108 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 ZNF493Q6ZR52 646 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 H0YIZ8 118 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 C12orf74Q32Q52 190 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 ZC2HC1AQ96GY0 325 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 RNF5Q99942 180 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 SPANXA1Q9NS26 97 aa12.55□□□□□ -0.4
CACNA1A-202ENST00000573710 ATP6V0E2Q8NHE4 81 aa12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 ZNF492Q9P255 531 aa12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 CACNA1HO95180 2353 aa12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 NLRC5Q86WI3 1866 aa12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 CLEC2BQ92478 149 aa12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 RPL39LQ96EH5 51 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 HHLA3Q9XRX5 114 aa12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 COL24A1Q17RW2 1714 aa12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 PRSS46E5RG02 174 aa12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 KLHDC3Q9BQ90 382 aa12.54□□□□□ -0.4
CACNA1A-202ENST00000573710 PRYO14603 147 aa12.53□□□□□ -0.4
CACNA1A-202ENST00000573710 IGHV2-70P01814 119 aa12.53□□□□□ -0.4
CACNA1A-202ENST00000573710 TRAV26-1A0A087WT03 109 aa12.53□□□□□ -0.4
CACNA1A-202ENST00000573710 ZNF106Q9H2Y7 1883 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-202ENST00000573710 CFPP27918 469 aa12.53□□□□□ -0.4
CACNA1A-202ENST00000573710 SIPA1L1O43166 1804 aa12.52□□□□□ -0.4
CACNA1A-202ENST00000573710 NDUFA4O00483 81 aa12.52□□□□□ -0.4
CACNA1A-202ENST00000573710 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.4
CACNA1A-202ENST00000573710 EIF4EBP2Q13542 120 aaPredicted RBP12.52□□□□□ -0.4
CACNA1A-202ENST00000573710 TPSG1Q9NRR2 321 aa12.52□□□□□ -0.4
CACNA1A-202ENST00000573710 C5orf63A6NC05 138 aa12.52□□□□□ -0.41
CACNA1A-202ENST00000573710 IGKV1-17P01599 117 aa12.52□□□□□ -0.41
CACNA1A-202ENST00000573710 IGHV7-4-1A0A0J9YVY3 117 aa12.52□□□□□ -0.41
CACNA1A-202ENST00000573710 K7EP34 96 aa12.52□□□□□ -0.41
CACNA1A-202ENST00000573710 C15orf62A8K5M9 175 aa12.52□□□□□ -0.41
CACNA1A-202ENST00000573710 FAM236DA0A1B0GTK5 79 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 IGLC7A0M8Q6 106 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 FAM236CP0DP71 79 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 CREBBPQ92793 2442 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 Q8N9W7 124 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 F8VRH5 84 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 ATP5G1P05496 136 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 SERTAD4-AS1Q5TG53 156 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 Q6ZVH6 145 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 UPK3BQ9BT76 320 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 MRPL27Q9P0M9 148 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 PLXNA3P51805 1871 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 DIRC1Q969H9 104 aa12.51□□□□□ -0.41
CACNA1A-202ENST00000573710 COL4A5P29400 1685 aa12.5□□□□□ -0.41
CACNA1A-202ENST00000573710 J3KT08 172 aa12.5□□□□□ -0.41
CACNA1A-202ENST00000573710 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
CACNA1A-202ENST00000573710 IGLV2-18A0A075B6J9 118 aa12.5□□□□□ -0.41
CACNA1A-202ENST00000573710 ATOX1O00244 68 aa12.5□□□□□ -0.41
CACNA1A-202ENST00000573710 LECT2O14960 151 aa12.5□□□□□ -0.41
CACNA1A-202ENST00000573710 PPDPFQ9H3Y8 114 aa12.5□□□□□ -0.41
CACNA1A-202ENST00000573710 PDE6HQ13956 83 aa12.5□□□□□ -0.41
CACNA1A-202ENST00000573710 K7EQD1 137 aa12.49□□□□□ -0.41
CACNA1A-202ENST00000573710 PYY3Q5JQD4 70 aa12.49□□□□□ -0.41
CACNA1A-202ENST00000573710 K7ENP7 123 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms