RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 LYRM9A8MSI8 78 aa10.39□□□□□ -0.75
NPLOC4-207ENST00000572346 B4DEV8 164 aa10.39□□□□□ -0.75
NPLOC4-207ENST00000572346 TYMSP04818 313 aa10.39□□□□□ -0.75
NPLOC4-207ENST00000572346 S100A4P26447 101 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-207ENST00000572346 SRSF3P84103 164 aaKnown RBP10.39□□□□□ -0.75
NPLOC4-207ENST00000572346 OR5I1Q13606 314 aa10.39□□□□□ -0.75
NPLOC4-207ENST00000572346 KRTAP4-5Q9BYR2 181 aa10.39□□□□□ -0.75
NPLOC4-207ENST00000572346 C11orf21Q9P2W6 132 aa10.39□□□□□ -0.75
NPLOC4-207ENST00000572346 TRBV20OR9-2A0A075B6H5 130 aa10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 IGLV2-8P01709 118 aa10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 DEFB130BP0DP73 79 aa10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 DEFB130AP0DP74 79 aa10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 TCL1AP56279 114 aa10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 FAM3BP58499 235 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 C11orf72Q8NBR9 251 aa10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 OCC1Q8TAD7 63 aa10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 MDFICQ9P1T7 246 aa10.38□□□□□ -0.75
NPLOC4-207ENST00000572346 TMSB15BA0A087X1C1 80 aa10.37□□□□□ -0.75
NPLOC4-207ENST00000572346 IGKV3D-20A0A0C4DH25 116 aa10.37□□□□□ -0.75
NPLOC4-207ENST00000572346 FAM74A3Q4VXF1 159 aa10.37□□□□□ -0.75
NPLOC4-207ENST00000572346 SPXQ9BT56 116 aa10.37□□□□□ -0.75
NPLOC4-207ENST00000572346 TRGV1A0A0A0MS02 117 aa10.36□□□□□ -0.75
NPLOC4-207ENST00000572346 IGHV3-16A0A0C4DH30 117 aa10.36□□□□□ -0.75
NPLOC4-207ENST00000572346 C9JQL5 133 aa10.36□□□□□ -0.75
NPLOC4-207ENST00000572346 ASIPP42127 132 aa10.36□□□□□ -0.75
NPLOC4-207ENST00000572346 DAZ2Q13117 558 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-207ENST00000572346 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
NPLOC4-207ENST00000572346 GAGE12BA1L429 117 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 GRIFINA4D1Z8 144 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 KRBOX1C9JBD0 128 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 GAGE7O76087 117 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 P01737 135 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 GAGE12FP0CL80 117 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 GAGE12GP0CL81 117 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 GAGE12IP0CL82 117 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 TNP2Q05952 138 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 TMEM241Q24JQ0 296 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 LY96Q9Y6Y9 160 aa10.35□□□□□ -0.75
NPLOC4-207ENST00000572346 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
NPLOC4-207ENST00000572346 RPL19P84098 196 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-207ENST00000572346 Q6ZTI0 123 aa10.34□□□□□ -0.75
NPLOC4-207ENST00000572346 COMMD7Q86VX2 200 aa10.34□□□□□ -0.75
NPLOC4-207ENST00000572346 OR2D3Q8NGH3 330 aa10.34□□□□□ -0.75
NPLOC4-207ENST00000572346 ZNRF2Q8NHG8 242 aa10.34□□□□□ -0.75
NPLOC4-207ENST00000572346 MRPL16Q9NX20 251 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-207ENST00000572346 NAT8Q9UHE5 227 aa10.34□□□□□ -0.75
NPLOC4-207ENST00000572346 NBDYA0A0U1RRE5 68 aa10.33□□□□□ -0.76
NPLOC4-207ENST00000572346 F5H768 121 aa10.33□□□□□ -0.76
NPLOC4-207ENST00000572346 H3BVH4 76 aa10.33□□□□□ -0.76
NPLOC4-207ENST00000572346 M0R2P5 195 aa10.33□□□□□ -0.76
NPLOC4-207ENST00000572346 SPINK4O60575 86 aa10.33□□□□□ -0.76
NPLOC4-207ENST00000572346 NUDT3O95989 172 aa10.33□□□□□ -0.76
NPLOC4-207ENST00000572346 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
NPLOC4-207ENST00000572346 HSPG2P98160 4391 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 XKRY2A2RUG3 117 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 C19orf71A6NCJ1 209 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 C16orf90A8MZG2 172 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 K7EN84 100 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 ATP5G1P05496 136 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 SFTA3P0C7M3 94 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 ERVFC1-1P60608 527 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 UQCC3Q6UW78 93 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 LINC01551Q86U37 167 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 C6orf223Q8N319 242 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 NUDT10Q8NFP7 164 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 NUDT11Q96G61 164 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 RNASE7Q9H1E1 156 aaKnown RBP10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 IL36BQ9NZH7 164 aa10.32□□□□□ -0.76
NPLOC4-207ENST00000572346 GATCO43716 136 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-207ENST00000572346 CXCL1P09341 107 aa10.31□□□□□ -0.76
NPLOC4-207ENST00000572346 ARMS2P0C7Q2 107 aa10.31□□□□□ -0.76
NPLOC4-207ENST00000572346 RNASE3P12724 160 aaKnown RBP10.31□□□□□ -0.76
NPLOC4-207ENST00000572346 ADIRFQ15847 76 aa10.31□□□□□ -0.76
NPLOC4-207ENST00000572346 DNLZQ5SXM8 178 aa10.31□□□□□ -0.76
NPLOC4-207ENST00000572346 C9orf85Q96MD7 179 aa10.31□□□□□ -0.76
NPLOC4-207ENST00000572346 PHLDA3Q9Y5J5 127 aa10.31□□□□□ -0.76
NPLOC4-207ENST00000572346 LINC00862A6NCI5 91 aa10.3□□□□□ -0.76
NPLOC4-207ENST00000572346 CDK2AP2O75956 126 aa10.3□□□□□ -0.76
NPLOC4-207ENST00000572346 CCL18P55774 89 aa10.3□□□□□ -0.76
NPLOC4-207ENST00000572346 RPL23P62829 140 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-207ENST00000572346 ZNF876PQ49A33 203 aa10.3□□□□□ -0.76
NPLOC4-207ENST00000572346 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
NPLOC4-207ENST00000572346 RASL10AQ92737 203 aa10.3□□□□□ -0.76
NPLOC4-207ENST00000572346 RPP21Q9H633 154 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-207ENST00000572346 LINC00588Q9Y4M8 146 aa10.3□□□□□ -0.76
NPLOC4-207ENST00000572346 FAM231DQ6ZW35 169 aa10.29□□□□□ -0.76
NPLOC4-207ENST00000572346 C15orf54Q8N8G6 183 aa10.29□□□□□ -0.76
NPLOC4-207ENST00000572346 SYT8Q8NBV8 401 aa10.29□□□□□ -0.76
NPLOC4-207ENST00000572346 TPPP3Q9BW30 176 aa10.29□□□□□ -0.76
NPLOC4-207ENST00000572346 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
NPLOC4-207ENST00000572346 GZMBP10144 247 aa10.28□□□□□ -0.76
NPLOC4-207ENST00000572346 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
NPLOC4-207ENST00000572346 OSTCQ9NRP0 149 aa10.28□□□□□ -0.76
NPLOC4-207ENST00000572346 F8W036 122 aa10.27□□□□□ -0.77
NPLOC4-207ENST00000572346 M0R381 172 aa10.27□□□□□ -0.77
NPLOC4-207ENST00000572346 ZFP82Q8N141 532 aa10.27□□□□□ -0.77
NPLOC4-207ENST00000572346 MAPKAPK5-AS1Q8N8E1 139 aa10.27□□□□□ -0.77
NPLOC4-207ENST00000572346 FER1L6-AS1Q8NA97 138 aa10.27□□□□□ -0.77
NPLOC4-207ENST00000572346 OR10G8Q8NGN5 311 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms