RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 OVOL1O14753 267 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 ZNF207O43670 478 aaKnown RBP5.16□□□□□ -1.58
CNOT1-222ENST00000570139 CD28P10747 220 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 IGLL1P15814 213 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 CBLN1P23435 193 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 S100PP25815 95 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 SNRPD3P62318 126 aaKnown RBP5.16□□□□□ -1.58
CNOT1-222ENST00000570139 RPL19P84098 196 aaKnown RBP5.16□□□□□ -1.58
CNOT1-222ENST00000570139 FLI1Q01543 452 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-222ENST00000570139 GOLT1AQ6ZVE7 132 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 FAM231DQ6ZW35 169 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 TCF24Q7RTU0 167 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 Q86TA4 180 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 BAGE2Q86Y30 109 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 TMEM183AQ8IXX5 376 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 EXOC3-AS1Q8N2X6 119 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 OR2K2Q8NGT1 345 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 ISOC2Q96AB3 205 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 SFRP2Q96HF1 295 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 DERL1Q9BUN8 251 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 DHRS4-AS1Q9P1J3 65 aa5.16□□□□□ -1.58
CNOT1-222ENST00000570139 TLN2Q9Y4G6 2542 aa5.15□□□□□ -1.58
CNOT1-222ENST00000570139 TRBV20OR9-2A0A075B6H5 130 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 TRAV9-1A0A075B6T8 112 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 H7BYZ3 331 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 GCGP01275 180 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 FOLR2P14207 255 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 GNG5P63218 68 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 TMEM78Q5T7P6 136 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 LCN12Q6JVE5 192 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 Q6ZN92 141 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 Q8N377 158 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 DYNLRB2Q8TF09 96 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 PGLYRP4Q96LB8 373 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 HIST1H4GQ99525 98 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 OSTCQ9NRP0 149 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 ZNF492Q9P255 531 aa5.15□□□□□ -1.59
CNOT1-222ENST00000570139 IGHV3OR16-13A0A075B7E8 117 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 IGHV3-49A0A0A0MS15 119 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 IGHV3-74A0A0B4J1X5 117 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 IGHV3-66A0A0C4DH42 116 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 DNASE2O00115 360 aaPredicted RBP5.14□□□□□ -1.59
CNOT1-222ENST00000570139 CMC4P56277 68 aaPredicted RBP5.14□□□□□ -1.59
CNOT1-222ENST00000570139 BTN1A1Q13410 526 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 DEFB136Q30KP8 78 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 RNF212Q495C1 297 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 IBA57Q5T440 356 aaKnown RBP5.14□□□□□ -1.59
CNOT1-222ENST00000570139 ZNF738Q8NE65 137 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 OR4B1Q8NGF8 309 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 OR10J6PQ8NGY7 276 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 DCANP1Q8TF63 244 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 LINC00477Q96M19 166 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 MS4A6AQ9H2W1 248 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 PSG8Q9UQ74 426 aa5.14□□□□□ -1.59
CNOT1-222ENST00000570139 ACANP16112 2415 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 IGHV1OR15-1A0A075B7D0 117 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 TRAV8-2A0A0B4J237 113 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 FAM231BA6NCW3 169 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 OR4C46A6NHA9 309 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 H7C423 109 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 M0R3E3 92 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 DUSP14O95147 198 aaKnown RBP5.13□□□□□ -1.59
CNOT1-222ENST00000570139 IGLV2-8P01709 118 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 MGST1P10620 155 aaKnown RBP5.13□□□□□ -1.59
CNOT1-222ENST00000570139 ZNF138P52744 262 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 APRG1Q8IVJ8 170 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 ODF3Q96PU9 254 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 SAV1Q9H4B6 383 aaPredicted RBP5.13□□□□□ -1.59
CNOT1-222ENST00000570139 NF1P21359 2839 aa5.13□□□□□ -1.59
CNOT1-222ENST00000570139 SONP18583 2426 aaKnown RBP5.12□□□□□ -1.59
CNOT1-222ENST00000570139 TRBV24-1A0A075B6N3 115 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 K7EN84 100 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 P01737 135 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 INSL3P51460 131 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 COX19Q49B96 90 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 SMUG1Q53HV7 270 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 Q6AWC8 147 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 PRNTQ86SH4 94 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 CBLN2Q8IUK8 224 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.12□□□□□ -1.59
CNOT1-222ENST00000570139 GFRA4Q9GZZ7 299 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 IL36BQ9NZH7 164 aa5.12□□□□□ -1.59
CNOT1-222ENST00000570139 CUBNO60494 3623 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 IGKV2-40A0A087WW87 121 aaPredicted RBP5.11□□□□□ -1.59
CNOT1-222ENST00000570139 TRAV8-1A0A0A6YYK1 113 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 C19orf71A6NCJ1 209 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 ZNF705GA8MUZ8 300 aaPredicted RBP5.11□□□□□ -1.59
CNOT1-222ENST00000570139 A8MWL6 223 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 GATCO43716 136 aaKnown RBP5.11□□□□□ -1.59
CNOT1-222ENST00000570139 SCO1O75880 301 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 IGKV2D-40P01614 121 aaPredicted RBP5.11□□□□□ -1.59
CNOT1-222ENST00000570139 RPS20P60866 119 aaKnown RBP5.11□□□□□ -1.59
CNOT1-222ENST00000570139 ELOBQ15370 118 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 DEFB114Q30KQ6 69 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 KRTAP21-3Q3LHN1 58 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 FAM162BQ5T6X4 162 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 ZC2HC1BQ5TFG8 222 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 EBLN2Q6P2I7 272 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 FOXI2Q6ZQN5 318 aa5.11□□□□□ -1.59
CNOT1-222ENST00000570139 RNF182Q8N6D2 247 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms