RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 LINC00574Q9H8X3 128 aa2.01□□□□□ -2.09
HMGB1P6-201ENST00000569046 TAF9BQ9HBM6 251 aa2.01□□□□□ -2.09
HMGB1P6-201ENST00000569046 BIN3Q9NQY0 253 aa2.01□□□□□ -2.09
HMGB1P6-201ENST00000569046 TAS2R4Q9NYW5 299 aa2.01□□□□□ -2.09
HMGB1P6-201ENST00000569046 DNAH11Q96DT5 4516 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 TRAV26-2A0A0B4J265 109 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 LINC00862A6NCI5 91 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 MCRIP1C9JLW8 97 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 GPR31O00270 319 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 COX7A2LO14548 114 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 ORC5O43913 435 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 IGKV1-16P04430 117 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 HTR1AP08908 422 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 HLA-DMBP28068 263 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 GTF2A1P52655 376 aaPredicted RBP2□□□□□ -2.09
HMGB1P6-201ENST00000569046 TCTAP57738 103 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 KRTAP10-1P60331 282 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 RHOGP84095 191 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 TMEM244Q5VVB8 128 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 UNQ9165/PRO28630Q6UXU0 137 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 ZNF833PQ6ZTB9 187 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 STX19Q8N4C7 294 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 OR11H2Q8NH07 326 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 ACOT12Q8WYK0 555 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 PP6455Q8WZ26 134 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 CNBD2Q96M20 576 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 GINS3Q9BRX5 216 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 ZNF586Q9NXT0 402 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 RSL24D1Q9UHA3 163 aaKnown RBP2□□□□□ -2.09
HMGB1P6-201ENST00000569046 SMPXQ9UHP9 88 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 MRPS16Q9Y3D3 137 aaKnown RBP2□□□□□ -2.09
HMGB1P6-201ENST00000569046 PHLDA3Q9Y5J5 127 aa2□□□□□ -2.09
HMGB1P6-201ENST00000569046 IGHV3-21A0A0B4J1V1 117 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 E7EUB6 86 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 G3V2T6 193 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 TSTD3H0UI37 97 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 J3QRK9 145 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 SLC22A1O15245 554 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 APOMO95445 188 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 IFNA10P01566 189 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 SMR3BP02814 79 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 CRYGDP07320 174 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 SULT1A3P0DMM9 295 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 SULT1A4P0DMN0 295 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 NTF3P20783 257 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 S100GP29377 79 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 ZNF137PP52743 207 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 RBM11P57052 281 aaKnown RBP1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 RHOBP62745 196 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 GNG5P63218 68 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 C10orf55Q5SWW7 151 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 DHFR2Q86XF0 187 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 UBE2DNLQ8IWF7 75 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 MIR7-3HGQ8N6C7 128 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 TCTEX1D1Q8N7M0 179 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 GDPD1Q8N9F7 314 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 OR8A1Q8NGG7 326 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 MRPL30Q8TCC3 161 aaKnown RBP1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 CANT1Q8WVQ1 401 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 GNPNAT1Q96EK6 184 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 S100A13Q99584 98 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 KLK12Q9UKR0 248 aa1.99□□□□□ -2.09
HMGB1P6-201ENST00000569046 APOBP04114 4563 aaKnown RBP1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 DEFB131BA0A096LNP1 70 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 A0A0B4J2C4 111 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 A8MUN3 132 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 A8MWP4 228 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 YPEL1O60688 119 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 GGCTO75223 188 aaKnown RBP1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 SULT1C4O75897 302 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 MT-CO2P00403 227 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 CTSDP07339 412 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 SCTP09683 121 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 LINC00869P0C866 280 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 SMIM17P0DL12 118 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 HTN3P15516 51 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 ZNF93P35789 620 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 RAB4BP61018 213 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 HAMPP81172 84 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 RHEBQ15382 184 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 IAH1Q2TAA2 248 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 FAM104BQ5XKR9 115 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 C12orf73Q69YU5 71 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 XAF1Q6GPH4 301 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 PRSS54Q6PEW0 395 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 GLIPR1L1Q6UWM5 242 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 GOLT1AQ6ZVE7 132 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 C6orf201Q7Z4U5 140 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 SPATA12Q7Z6I5 190 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 OR5D14Q8NGL3 314 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 OR5AK2Q8NH90 309 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 USMG5Q96IX5 58 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 YPEL2Q96QA6 119 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 RNF5Q99942 180 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 COMMD5Q9GZQ3 224 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 MIXL1Q9H2W2 232 aa1.98□□□□□ -2.09
HMGB1P6-201ENST00000569046 C11orf68Q9H3H3 251 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms