RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 OR10J6PQ8NGY7 276 aa13.83□□□□□ -0.2
PKD1-235ENST00000568591 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.83□□□□□ -0.28e-7■■■□□ 15.1
PKD1-235ENST00000568591 E9PLD3 99 aa13.83□□□□□ -0.2
PKD1-235ENST00000568591 H3BMG7 143 aa13.83□□□□□ -0.2
PKD1-235ENST00000568591 NEXN-AS1Q8NBZ9 246 aa13.83□□□□□ -0.2
PKD1-235ENST00000568591 TOMM6Q96B49 74 aa13.83□□□□□ -0.2
PKD1-235ENST00000568591 JPT2Q9H910 190 aa13.83□□□□□ -0.2
PKD1-235ENST00000568591 EMP1P54849 157 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 C2orf66Q6UXQ4 117 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 CYSLTR1Q9Y271 337 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 TRBV7-3A0A075B6L6 115 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 TRAV21A0A0B4J279 112 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 IGHV4-38-2P0DP08 117 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 RNASE3P12724 160 aaKnown RBP13.82□□□□□ -0.2
PKD1-235ENST00000568591 ASIPP42127 132 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 PSMG4Q5JS54 123 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 BAALCQ8WXS3 180 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 ZNF479Q96JC4 524 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 DPH3P1Q9H4G8 78 aa13.82□□□□□ -0.2
PKD1-235ENST00000568591 FAM223BA6NKX1 122 aa13.81□□□□□ -0.2
PKD1-235ENST00000568591 HLA-DRB4P13762 266 aa13.81□□□□□ -0.2
PKD1-235ENST00000568591 BLCAPP62952 87 aa13.81□□□□□ -0.2
PKD1-235ENST00000568591 FAM223AQ8IWN6 122 aa13.81□□□□□ -0.2
PKD1-235ENST00000568591 LINC00477Q96M19 166 aa13.81□□□□□ -0.2
PKD1-235ENST00000568591 HLA-DRB4X5D2U9 266 aa13.81□□□□□ -0.2
PKD1-235ENST00000568591 IGHV4-39P01824 125 aa13.81□□□□□ -0.2
PKD1-235ENST00000568591 CSPG4Q6UVK1 2322 aa13.8□□□□□ -0.2
PKD1-235ENST00000568591 TRAV12-1A0A0B4J245 112 aa13.8□□□□□ -0.2
PKD1-235ENST00000568591 MYMXA0A1B0GTQ4 84 aa13.8□□□□□ -0.2
PKD1-235ENST00000568591 PRSS29PA6NIE9 313 aa13.8□□□□□ -0.2
PKD1-235ENST00000568591 OR11H12B2RN74 326 aa13.8□□□□□ -0.2
PKD1-235ENST00000568591 ORMDL2Q53FV1 153 aa13.8□□□□□ -0.2
PKD1-235ENST00000568591 SH2D6Q7Z4S9 175 aa13.8□□□□□ -0.2
PKD1-235ENST00000568591 OR11H1Q8NG94 326 aa13.8□□□□□ -0.2
PKD1-235ENST00000568591 OR11H2Q8NH07 326 aa13.8□□□□□ -0.2
PKD1-235ENST00000568591 DUSP14O95147 198 aaKnown RBP13.79□□□□□ -0.2
PKD1-235ENST00000568591 SAMD13Q5VXD3 122 aa13.79□□□□□ -0.2
PKD1-235ENST00000568591 FOXI2Q6ZQN5 318 aa13.79□□□□□ -0.2
PKD1-235ENST00000568591 IGHV4-61A0A0C4DH41 118 aa13.79□□□□□ -0.2
PKD1-235ENST00000568591 LGALS1P09382 135 aaKnown RBP13.79□□□□□ -0.2
PKD1-235ENST00000568591 LENEPQ9Y5L5 61 aa13.79□□□□□ -0.2
PKD1-235ENST00000568591 IGHV1-69DA0A0B4J2H0 117 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 IGHV1-69P01742 117 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 PF4V1P10720 104 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 KLHL30-AS1Q8NEE0 82 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 PLEKHB2Q96CS7 222 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 PRADC1Q9BSG0 188 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 NDUFA4O00483 81 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 OVOL1O14753 267 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 FAM19A4Q96LR4 140 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 RHPN1-AS1Q9BWJ2 59 aa13.78□□□□□ -0.2
PKD1-235ENST00000568591 SFTA2Q6UW10 78 aa13.77□□□□□ -0.21
PKD1-235ENST00000568591 H3BUX3 64 aa13.77□□□□□ -0.21
PKD1-235ENST00000568591 C20orf78Q9BR46 151 aa13.77□□□□□ -0.21
PKD1-235ENST00000568591 A0A087WWL8 130 aa13.76□□□□□ -0.21
PKD1-235ENST00000568591 TSHBP01222 138 aa13.76□□□□□ -0.21
PKD1-235ENST00000568591 CRYGDP07320 174 aa13.76□□□□□ -0.21
PKD1-235ENST00000568591 LINC00315P59091 139 aa13.75□□□□□ -0.21
PKD1-235ENST00000568591 ETDBQ3ZM63 59 aa13.75□□□□□ -0.21
PKD1-235ENST00000568591 SLC25A16P16260 332 aa13.75□□□□□ -0.21
PKD1-235ENST00000568591 RPL39P62891 51 aaKnown RBP13.75□□□□□ -0.21
PKD1-235ENST00000568591 TAL2Q16559 108 aa13.75□□□□□ -0.21
PKD1-235ENST00000568591 CD300EQ496F6 205 aaPredicted RBP13.75□□□□□ -0.21
PKD1-235ENST00000568591 MORN3Q6PF18 240 aaPredicted RBP13.75□□□□□ -0.21
PKD1-235ENST00000568591 SPANXB1Q9NS25 103 aaPredicted RBP13.75□□□□□ -0.21
PKD1-235ENST00000568591 UTP20O75691 2785 aaKnown RBP13.75□□□□□ -0.21
PKD1-235ENST00000568591 CRIP2P52943 208 aaPredicted RBP13.74□□□□□ -0.21
PKD1-235ENST00000568591 UCNP55089 124 aa13.74□□□□□ -0.21
PKD1-235ENST00000568591 RRN3P1Q2M238 152 aa13.74□□□□□ -0.21
PKD1-235ENST00000568591 SORL1Q92673 2214 aa13.74□□□□□ -0.21
PKD1-235ENST00000568591 CUBNO60494 3623 aa13.74□□□□□ -0.21
PKD1-235ENST00000568591 ZNF815PA8K554 130 aa13.73□□□□□ -0.21
PKD1-235ENST00000568591 SCGB1A1P11684 91 aa13.73□□□□□ -0.21
PKD1-235ENST00000568591 INSL3P51460 131 aa13.73□□□□□ -0.21
PKD1-235ENST00000568591 KIF25-AS1Q9Y6Z4 181 aa13.73□□□□□ -0.21
PKD1-235ENST00000568591 C11orf86A6NJI1 115 aa13.73□□□□□ -0.21
PKD1-235ENST00000568591 GTSF1LQ9H1H1 148 aa13.72□□□□□ -0.21
PKD1-235ENST00000568591 TP53TG1Q9Y2A0 90 aa13.72□□□□□ -0.21
PKD1-235ENST00000568591 FLNCQ14315 2725 aa13.72□□□□□ -0.21
PKD1-235ENST00000568591 CFAP46Q8IYW2 2715 aa13.72□□□□□ -0.21
PKD1-235ENST00000568591 DOPEY2Q9Y3R5 2298 aa13.72□□□□□ -0.21
PKD1-235ENST00000568591 TRAV12-3A0A0B4J271 114 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 IGKV3-20P01619 116 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 IGHG2P01859 326 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 COX6B1P14854 86 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 CRYBA4P53673 196 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 ATP6V0BQ99437 205 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 IGLV4-69A0A075B6H9 119 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 SUMO4Q6EEV6 95 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 C10orf99Q6UWK7 81 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 SCGB1D4Q6XE38 83 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 APRG1Q8IVJ8 170 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 PGPEP1Q9NXJ5 209 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 PRO0461Q9UI25 63 aa13.71□□□□□ -0.21
PKD1-235ENST00000568591 TSSC4Q9Y5U2 329 aaPredicted RBP13.71□□□□□ -0.21
PKD1-235ENST00000568591 ZANQ9Y493 2812 aa13.71□□□□□ -0.22
PKD1-235ENST00000568591 A0A1B0GWB2 263 aa13.7□□□□□ -0.22
PKD1-235ENST00000568591 F8W1H4 67 aa13.69□□□□□ -0.22
PKD1-235ENST00000568591 GNLYP22749 145 aa13.69□□□□□ -0.22
PKD1-235ENST00000568591 FAM74A4Q5TZK3 123 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms