RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 KALRNO60229 2985 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 SPINK8P0C7L1 97 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 SRSF9Q13242 221 aaKnown RBP eCLIP11.89□□□□□ -0.51
COMMD4-215ENST00000566843 ECSCRQ19T08 205 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 SCGB1D4Q6XE38 83 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 POM121L12Q8N7R1 296 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 EEF1AKMT3Q96AZ1 226 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 VCX2Q9H322 139 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 ATP6V0E1O15342 81 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 LY6HO94772 140 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 CRYGDP07320 174 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 Q6ZUT4 128 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 TEN1Q86WV5 123 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 NDUFA11Q86Y39 141 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 ZFAND2AQ8N6M9 145 aa11.89□□□□□ -0.51
COMMD4-215ENST00000566843 TRBV7-1A0A0A6YYK4 115 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 LOC107984156A0A0G2JMH3 177 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 A0A0J9YY99 117 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 PPP1R17O96001 155 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 MT-ATP8P03928 68 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 C9orf139Q6ZV77 190 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 GPHB5Q86YW7 130 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 ARL17AQ8IVW1 177 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 IGHV3-49A0A0A0MS15 119 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 IGHV1-69DA0A0B4J2H0 117 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 IGF1P05019 195 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 RPL32P62910 135 aaKnown RBP11.88□□□□□ -0.51
COMMD4-215ENST00000566843 PAPPA-AS1Q5QFB9 102 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 C20orf173Q96LM9 149 aa11.88□□□□□ -0.51
COMMD4-215ENST00000566843 IGLV4-69A0A075B6H9 119 aa11.87□□□□□ -0.51
COMMD4-215ENST00000566843 TRBV20-1A0A075B6N2 111 aa11.87□□□□□ -0.51
COMMD4-215ENST00000566843 TRAV21A0A0B4J279 112 aa11.87□□□□□ -0.51
COMMD4-215ENST00000566843 C14orf178Q8N769 122 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-215ENST00000566843 KLHL30-AS1Q8NEE0 82 aa11.87□□□□□ -0.51
COMMD4-215ENST00000566843 GLMPQ8WWB7 406 aa11.87□□□□□ -0.51
COMMD4-215ENST00000566843 ASIPP42127 132 aa11.86□□□□□ -0.51
COMMD4-215ENST00000566843 XGP55808 180 aa11.86□□□□□ -0.51
COMMD4-215ENST00000566843 C11orf86A6NJI1 115 aa11.86□□□□□ -0.51
COMMD4-215ENST00000566843 TCL1BO95988 128 aa11.86□□□□□ -0.51
COMMD4-215ENST00000566843 TSHBP01222 138 aa11.86□□□□□ -0.51
COMMD4-215ENST00000566843 PTH2Q96A98 100 aa11.86□□□□□ -0.51
COMMD4-215ENST00000566843 HERVK_113P61574 105 aa11.85□□□□□ -0.51
COMMD4-215ENST00000566843 AJUBAQ96IF1 538 aa11.85□□□□□ -0.51
COMMD4-215ENST00000566843 PHLDA3Q9Y5J5 127 aa11.85□□□□□ -0.51
COMMD4-215ENST00000566843 CACNA1BQ00975 2339 aa11.85□□□□□ -0.51
COMMD4-215ENST00000566843 SPRY2O43597 315 aa11.85□□□□□ -0.51
COMMD4-215ENST00000566843 DUSP14O95147 198 aaKnown RBP11.85□□□□□ -0.51
COMMD4-215ENST00000566843 IGHV3-30P01768 117 aa11.85□□□□□ -0.51
COMMD4-215ENST00000566843 IGHV3-30-5P0DP03 117 aa11.85□□□□□ -0.51
COMMD4-215ENST00000566843 SIRPDQ9H106 197 aa11.85□□□□□ -0.51
COMMD4-215ENST00000566843 IGIPA6NJ69 53 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 G3V318 75 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 OVOL1O14753 267 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 MGPP08493 103 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 S100A4P26447 101 aaKnown RBP11.84□□□□□ -0.51
COMMD4-215ENST00000566843 ANXA2RQ3ZCQ2 193 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 FBXL19-AS1Q494R0 122 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 FAM19A4Q96LR4 140 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 USP24Q9UPU5 2620 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 CCL21O00585 134 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 NXPH4O95158 308 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 CFC1BP0CG36 223 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 CFC1P0CG37 223 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 SFTA2Q6UW10 78 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 APRG1Q8IVJ8 170 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 SLC25A29Q8N8R3 303 aa11.84□□□□□ -0.51
COMMD4-215ENST00000566843 IGHV4OR15-8A0A075B7B6 117 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 A0A087WW49 117 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 LINC01548A6NM66 108 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 A8MWV9 139 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 WNK2Q9Y3S1 2297 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 M0QXV9 152 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 SOCS3O14543 225 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 ZFP36P26651 326 aaKnown RBP11.83□□□□□ -0.52
COMMD4-215ENST00000566843 LINC00315P59091 139 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 PMVKQ15126 192 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 C11orf71Q6IPW1 123 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 C10orf126Q8N4M7 172 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 KIF25-AS1Q9Y6Z4 181 aa11.83□□□□□ -0.52
COMMD4-215ENST00000566843 ADGRG4Q8IZF6 3080 aa11.82□□□□□ -0.52
COMMD4-215ENST00000566843 ZNF688P0C7X2 276 aa11.82□□□□□ -0.52
COMMD4-215ENST00000566843 OR10J6PQ8NGY7 276 aa11.82□□□□□ -0.52
COMMD4-215ENST00000566843 TMEM141Q96I45 108 aa11.82□□□□□ -0.52
COMMD4-215ENST00000566843 J3KRW8 73 aa11.81□□□□□ -0.52
COMMD4-215ENST00000566843 RNASE3P12724 160 aaKnown RBP11.81□□□□□ -0.52
COMMD4-215ENST00000566843 GRNP28799 593 aaKnown RBP11.81□□□□□ -0.52
COMMD4-215ENST00000566843 POLR2KP53803 58 aaKnown RBP11.81□□□□□ -0.52
COMMD4-215ENST00000566843 Q6ZS46 218 aa11.81□□□□□ -0.52
COMMD4-215ENST00000566843 AMELXQ99217 191 aa11.81□□□□□ -0.52
COMMD4-215ENST00000566843 ERG28Q9UKR5 140 aa11.81□□□□□ -0.52
COMMD4-215ENST00000566843 TSPEAR-AS2P59090 65 aa11.81□□□□□ -0.52
COMMD4-215ENST00000566843 TIMM17AQ99595 171 aa11.81□□□□□ -0.52
COMMD4-215ENST00000566843 TP53TG1Q9Y2A0 90 aa11.81□□□□□ -0.52
COMMD4-215ENST00000566843 TRBV7-9A0A0J9YWB2 115 aa11.8□□□□□ -0.52
COMMD4-215ENST00000566843 UBE2E1P51965 193 aa11.8□□□□□ -0.52
COMMD4-215ENST00000566843 ANKRD29Q8N6D5 301 aa11.8□□□□□ -0.52
COMMD4-215ENST00000566843 PRO1854Q9UHT4 67 aa11.8□□□□□ -0.52
COMMD4-215ENST00000566843 FAM90A27PA6NNH2 459 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms