RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 PAX4O43316 350 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 SFTA3P0C7M3 94 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 S100A4P26447 101 aaKnown RBP11.5□□□□□ -0.57
CDT1-202ENST00000562747 TAGLN2P37802 199 aaKnown RBP11.5□□□□□ -0.57
CDT1-202ENST00000562747 ASIPP42127 132 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 CRYBA4P53673 196 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 ZNF876PQ49A33 203 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 DNLZQ5SXM8 178 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 BAGE2Q86Y30 109 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 OR4C5Q8NGB2 326 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 MLST8Q9BVC4 326 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 KRBOX1C9JBD0 128 aa11.49□□□□□ -0.57
CDT1-202ENST00000562747 PDE6DO43924 150 aa11.49□□□□□ -0.57
CDT1-202ENST00000562747 BCL2P10415 239 aa11.49□□□□□ -0.57
CDT1-202ENST00000562747 RPL35P42766 123 aaKnown RBP11.49□□□□□ -0.57
CDT1-202ENST00000562747 BLOC1S1P78537 153 aa11.49□□□□□ -0.57
CDT1-202ENST00000562747 MEF2BQ02080 365 aaPredicted RBP11.49□□□□□ -0.57
CDT1-202ENST00000562747 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
CDT1-202ENST00000562747 IL36BQ9NZH7 164 aa11.49□□□□□ -0.57
CDT1-202ENST00000562747 A0A096LPF7 62 aa11.48□□□□□ -0.57
CDT1-202ENST00000562747 C9JCJ5 164 aa11.48□□□□□ -0.57
CDT1-202ENST00000562747 CIDEAO60543 219 aa11.48□□□□□ -0.57
CDT1-202ENST00000562747 ZNF575Q86XF7 245 aa11.48□□□□□ -0.57
CDT1-202ENST00000562747 NHLRC2Q8NBF2 726 aa11.48□□□□□ -0.57
CDT1-202ENST00000562747 VAX2Q9UIW0 290 aa11.48□□□□□ -0.57
CDT1-202ENST00000562747 LINC00588Q9Y4M8 146 aa11.48□□□□□ -0.57
CDT1-202ENST00000562747 ICOSQ9Y6W8 199 aa11.48□□□□□ -0.57
CDT1-202ENST00000562747 NACAE9PAV3 2078 aa11.48□□□□□ -0.57
CDT1-202ENST00000562747 HSPG2P98160 4391 aa11.47□□□□□ -0.57
CDT1-202ENST00000562747 PGPEP1LA6NFU8 196 aa11.47□□□□□ -0.57
CDT1-202ENST00000562747 M0R036 132 aa11.47□□□□□ -0.57
CDT1-202ENST00000562747 ZNF506Q5JVG8 444 aa11.47□□□□□ -0.57
CDT1-202ENST00000562747 PIK3CD-AS1Q5SR53 167 aa11.47□□□□□ -0.57
CDT1-202ENST00000562747 Q6ZR54 194 aa11.47□□□□□ -0.57
CDT1-202ENST00000562747 BOLA1Q9Y3E2 137 aa11.47□□□□□ -0.57
CDT1-202ENST00000562747 IGLV2-18A0A075B6J9 118 aa11.46□□□□□ -0.57
CDT1-202ENST00000562747 RS1O15537 224 aa11.46□□□□□ -0.57
CDT1-202ENST00000562747 ZNRF2Q8NHG8 242 aa11.46□□□□□ -0.57
CDT1-202ENST00000562747 LYPD6BQ8NI32 183 aa11.46□□□□□ -0.57
CDT1-202ENST00000562747 DERL1Q9BUN8 251 aa11.46□□□□□ -0.57
CDT1-202ENST00000562747 MRPL23Q16540 153 aaKnown RBP11.45□□□□□ -0.58
CDT1-202ENST00000562747 ESRGQ1W209 222 aa11.45□□□□□ -0.58
CDT1-202ENST00000562747 CFAP126Q5VTH2 177 aa11.45□□□□□ -0.58
CDT1-202ENST00000562747 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
CDT1-202ENST00000562747 H3BVH4 76 aa11.44□□□□□ -0.58
CDT1-202ENST00000562747 CXCL1P09341 107 aa11.44□□□□□ -0.58
CDT1-202ENST00000562747 ARMS2P0C7Q2 107 aa11.44□□□□□ -0.58
CDT1-202ENST00000562747 GATA1P15976 413 aaPredicted RBP11.44□□□□□ -0.58
CDT1-202ENST00000562747 CENPWQ5EE01 88 aa11.44□□□□□ -0.58
CDT1-202ENST00000562747 PCNPQ8WW12 178 aaKnown RBP11.44□□□□□ -0.58
CDT1-202ENST00000562747 UPK3BQ9BT76 320 aa11.44□□□□□ -0.58
CDT1-202ENST00000562747 MED9Q9NWA0 146 aa11.44□□□□□ -0.58
CDT1-202ENST00000562747 TMSB15BA0A087X1C1 80 aa11.43□□□□□ -0.58
CDT1-202ENST00000562747 GRIFINA4D1Z8 144 aa11.43□□□□□ -0.58
CDT1-202ENST00000562747 A8MWV9 139 aa11.43□□□□□ -0.58
CDT1-202ENST00000562747 SYT8Q8NBV8 401 aa11.43□□□□□ -0.58
CDT1-202ENST00000562747 SCRT2Q9NQ03 307 aa11.43□□□□□ -0.58
CDT1-202ENST00000562747 MRPS16Q9Y3D3 137 aaKnown RBP11.43□□□□□ -0.58
CDT1-202ENST00000562747 K7EQD1 137 aa11.42□□□□□ -0.58
CDT1-202ENST00000562747 GYPEP15421 78 aa11.42□□□□□ -0.58
CDT1-202ENST00000562747 GNG4P50150 75 aa11.42□□□□□ -0.58
CDT1-202ENST00000562747 PRR27Q6MZM9 219 aa11.42□□□□□ -0.58
CDT1-202ENST00000562747 NEGR1Q7Z3B1 354 aa11.42□□□□□ -0.58
CDT1-202ENST00000562747 PHLDA3Q9Y5J5 127 aa11.42□□□□□ -0.58
CDT1-202ENST00000562747 TRBV6-4A0A1B0GX49 114 aa11.41□□□□□ -0.58
CDT1-202ENST00000562747 RAB19A4D1S5 217 aa11.41□□□□□ -0.58
CDT1-202ENST00000562747 IGLV2-8P01709 118 aa11.41□□□□□ -0.58
CDT1-202ENST00000562747 SRIP30626 198 aa11.41□□□□□ -0.58
CDT1-202ENST00000562747 ZFP2Q6ZN57 461 aa11.41□□□□□ -0.58
CDT1-202ENST00000562747 PARLQ9H300 379 aa11.41□□□□□ -0.58
CDT1-202ENST00000562747 Q9H8V8 135 aa11.41□□□□□ -0.58
CDT1-202ENST00000562747 NBDYA0A0U1RRE5 68 aa11.4□□□□□ -0.58
CDT1-202ENST00000562747 RBFOX3A6NFN3 312 aa11.4□□□□□ -0.58
CDT1-202ENST00000562747 MGST1P10620 155 aaKnown RBP11.4□□□□□ -0.58
CDT1-202ENST00000562747 RPL19P84098 196 aaKnown RBP11.4□□□□□ -0.58
CDT1-202ENST00000562747 RHOHQ15669 191 aa11.4□□□□□ -0.58
CDT1-202ENST00000562747 DMRTA1Q5VZB9 504 aa11.4□□□□□ -0.58
CDT1-202ENST00000562747 ZFP82Q8N141 532 aa11.4□□□□□ -0.58
CDT1-202ENST00000562747 PRADC1Q9BSG0 188 aa11.4□□□□□ -0.58
CDT1-202ENST00000562747 BIN3Q9NQY0 253 aa11.4□□□□□ -0.58
CDT1-202ENST00000562747 TRBV20OR9-2A0A075B6H5 130 aa11.39□□□□□ -0.59
CDT1-202ENST00000562747 LYPD5Q6UWN5 251 aa11.39□□□□□ -0.59
CDT1-202ENST00000562747 SH2D6Q7Z4S9 175 aa11.39□□□□□ -0.59
CDT1-202ENST00000562747 SLC25A29Q8N8R3 303 aa11.39□□□□□ -0.59
CDT1-202ENST00000562747 DAZAP1Q96EP5 407 aaKnown RBP11.39□□□□□ -0.59
CDT1-202ENST00000562747 LRP1BQ9NZR2 4599 aa11.38□□□□□ -0.59
CDT1-202ENST00000562747 IGHV3-73A0A0B4J1V6 119 aa11.38□□□□□ -0.59
CDT1-202ENST00000562747 TMEM250H0YL14 139 aa11.38□□□□□ -0.59
CDT1-202ENST00000562747 RHODO00212 210 aa11.38□□□□□ -0.59
CDT1-202ENST00000562747 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
CDT1-202ENST00000562747 C19orf71A6NCJ1 209 aa11.37□□□□□ -0.59
CDT1-202ENST00000562747 M0R381 172 aa11.37□□□□□ -0.59
CDT1-202ENST00000562747 SNAI2O43623 268 aa11.37□□□□□ -0.59
CDT1-202ENST00000562747 NDUFS6O75380 124 aaKnown RBP11.37□□□□□ -0.59
CDT1-202ENST00000562747 OR5AL1P0C617 328 aa11.37□□□□□ -0.59
CDT1-202ENST00000562747 TTC32Q5I0X7 151 aa11.37□□□□□ -0.59
CDT1-202ENST00000562747 UFSP1Q6NVU6 142 aa11.37□□□□□ -0.59
CDT1-202ENST00000562747 SFRP2Q96HF1 295 aa11.37□□□□□ -0.59
CDT1-202ENST00000562747 SSBP4Q9BWG4 385 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms