RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 GP9P14770 177 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 Q8TAT8 98 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 DPH3P1Q9H4G8 78 aa5.88□□□□□ -1.47
TCF4-216ENST00000562680 TNCP24821 2201 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 H3BMG7 143 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 RHODO00212 210 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 IGHG4P01861 327 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 CIRBPQ14011 172 aaKnown RBP5.87□□□□□ -1.47
TCF4-216ENST00000562680 FOXI2Q6ZQN5 318 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 AMN1Q8IY45 258 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 Q8N6K4 173 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 PRSS2P07478 247 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 CLPSL1A2RUU4 121 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 MYCNOSP40205 109 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 CHD9Q3L8U1 2897 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 VWC2LB2RUY7 222 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 CCL24O00175 119 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 BUB3O43684 328 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 LYZL1Q6UWQ5 148 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 NUP35Q8NFH5 326 aa5.87□□□□□ -1.47
TCF4-216ENST00000562680 DOPEY2Q9Y3R5 2298 aa5.86□□□□□ -1.47
TCF4-216ENST00000562680 MYO18BQ8IUG5 2567 aa5.86□□□□□ -1.47
TCF4-216ENST00000562680 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
TCF4-216ENST00000562680 RNF152Q8N8N0 203 aa5.86□□□□□ -1.47
TCF4-216ENST00000562680 PATE2Q6UY27 113 aa5.86□□□□□ -1.47
TCF4-216ENST00000562680 LAMTOR3Q9UHA4 124 aa5.86□□□□□ -1.47
TCF4-216ENST00000562680 ATP5G1P05496 136 aa5.86□□□□□ -1.47
TCF4-216ENST00000562680 C18orf15Q96N68 181 aa5.86□□□□□ -1.47
TCF4-216ENST00000562680 TRBV6-1A0A0K0K1D8 114 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 PRSS46E5RG02 174 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 HBDP02042 147 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 TAL2Q16559 108 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 WFDC11Q8NEX6 87 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 FAM167A-AS1Q96KT0 104 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 PYGO2Q9BRQ0 406 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 TRAV12-3A0A0B4J271 114 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 LTAP01374 205 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 WFDC2Q14508 124 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 FAM19A5Q7Z5A7 132 aaPredicted RBP5.85□□□□□ -1.47
TCF4-216ENST00000562680 CHD7Q9P2D1 2997 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 E7EUB6 86 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 LINC00694P0DN24 101 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 HERVK_113P63121 156 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 DYNAPQ8N1N2 210 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 C4orf3Q8WVX3 66 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 PKD1L2Q7Z442 2459 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 UQCRQO14949 82 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 VPREB1P12018 145 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 NPC2P61916 151 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 LINC00479Q96M42 142 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 NOTCH3Q9UM47 2321 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 A0A0U1RQV1 116 aa5.85□□□□□ -1.47
TCF4-216ENST00000562680 C1orf229Q6ZS94 237 aaPredicted RBP5.85□□□□□ -1.47
TCF4-216ENST00000562680 IGHV1OR15-1A0A075B7D0 117 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 IGKV1OR2-108A0A075B7D4 117 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 DNAJC9-AS1A6NH13 148 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 NDUFA7O95182 113 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 UTF1Q5T230 341 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 C9orf66Q5T8R8 295 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 SCGB3A1Q96QR1 104 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 CHAC1Q9BUX1 264 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 CEP350Q5VT06 3117 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 APOC4P55056 127 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 IGFL4Q6B9Z1 124 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 TMEM170BQ5T4T1 132 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 ZNF295-AS1Q8N0V1 137 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 RNF182Q8N6D2 247 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 U3KQE9 123 aa5.84□□□□□ -1.47
TCF4-216ENST00000562680 TRGV4A0A0C4DH28 118 aa5.84□□□□□ -1.48
TCF4-216ENST00000562680 ERCC8Q13216 396 aa5.84□□□□□ -1.48
TCF4-216ENST00000562680 ATXN8Q156A1 80 aa5.84□□□□□ -1.48
TCF4-216ENST00000562680 ZNF580Q9UK33 172 aa5.84□□□□□ -1.48
TCF4-216ENST00000562680 PCSK5Q92824 1860 aa5.84□□□□□ -1.48
TCF4-216ENST00000562680 H3BMM0 161 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 ARMS2P0C7Q2 107 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 RPL36AP83881 106 aaKnown RBP5.83□□□□□ -1.48
TCF4-216ENST00000562680 RPL36ALQ969Q0 106 aaKnown RBP5.83□□□□□ -1.48
TCF4-216ENST00000562680 UBE2WQ96B02 151 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 V9GYV3 84 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 IGKV1D-37A0A075B6S9 117 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 WIPF1O43516 503 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 C3orf22Q8N5N4 141 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 A0A1W2PPR1 153 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 KNCNA6PVL3 124 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 MALP21145 153 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 INSL3P51460 131 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 DOPEY1Q5JWR5 2465 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 HRCT1Q6UXD1 115 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 SMIM27A0A1W2PRY6 76 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 LGALS9O00182 355 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 IFI27P40305 119 aaPredicted RBP5.83□□□□□ -1.48
TCF4-216ENST00000562680 IGHV1-24A0A0C4DH33 117 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 ATOX1O00244 68 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 VCYO14598 125 aa5.83□□□□□ -1.48
TCF4-216ENST00000562680 MRPL36Q9P0J6 103 aaKnown RBP5.83□□□□□ -1.48
TCF4-216ENST00000562680 TRANK1O15050 2925 aa5.82□□□□□ -1.48
TCF4-216ENST00000562680 TEN1Q86WV5 123 aa5.82□□□□□ -1.48
TCF4-216ENST00000562680 C20orf78Q9BR46 151 aa5.82□□□□□ -1.48
TCF4-216ENST00000562680 C2orf70A6NJV1 201 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms