RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 MYCBP2O75592 4640 aa17.11■□□□□ 0.33
NME3-202ENST00000561637 MAP1LC3B2A6NCE7 125 aa17.11■□□□□ 0.33
NME3-202ENST00000561637 DNAH10OSP0CZ25 163 aa17.11■□□□□ 0.33
NME3-202ENST00000561637 TXNDC17Q9BRA2 123 aa17.11■□□□□ 0.33
NME3-202ENST00000561637 MAP1LC3BQ9GZQ8 125 aa17.11■□□□□ 0.33
NME3-202ENST00000561637 CRIP1P50238 77 aa17.09■□□□□ 0.33
NME3-202ENST00000561637 SAPCD1Q5SSQ6 148 aa17.09■□□□□ 0.33
NME3-202ENST00000561637 Q6ZSN1 163 aa17.09■□□□□ 0.33
NME3-202ENST00000561637 OR11H4Q8NGC9 324 aa17.09■□□□□ 0.33
NME3-202ENST00000561637 ZC2HC1AQ96GY0 325 aa17.09■□□□□ 0.33
NME3-202ENST00000561637 VPS13BQ7Z7G8 4022 aa17.09■□□□□ 0.33
NME3-202ENST00000561637 JPT2Q9H910 190 aa17.07■□□□□ 0.32
NME3-202ENST00000561637 MSRB1Q9NZV6 116 aa17.06■□□□□ 0.32
NME3-202ENST00000561637 M0R036 132 aa17.05■□□□□ 0.32
NME3-202ENST00000561637 PPT1P50897 306 aa17.05■□□□□ 0.32
NME3-202ENST00000561637 KCNRGQ8N5I3 272 aa17.05■□□□□ 0.32
NME3-202ENST00000561637 PTH2Q96A98 100 aa17.05■□□□□ 0.32
NME3-202ENST00000561637 Q9UF83 564 aa17.05■□□□□ 0.32
NME3-202ENST00000561637 FLG2Q5D862 2391 aaPredicted RBP17.04■□□□□ 0.32
NME3-202ENST00000561637 A0A1B0GV50 99 aa17.04■□□□□ 0.32
NME3-202ENST00000561637 CRYGDP07320 174 aa17.04■□□□□ 0.32
NME3-202ENST00000561637 EVI2AP22794 236 aa17.04■□□□□ 0.32
NME3-202ENST00000561637 XGP55808 180 aa17.04■□□□□ 0.32
NME3-202ENST00000561637 SAMD10Q9BYL1 202 aa17.04■□□□□ 0.32
NME3-202ENST00000561637 PARLQ9H300 379 aa17.04■□□□□ 0.32
NME3-202ENST00000561637 TRBV6-4A0A1B0GX49 114 aa17.03■□□□□ 0.32
NME3-202ENST00000561637 GRIFINA4D1Z8 144 aa17.03■□□□□ 0.32
NME3-202ENST00000561637 FABP5P3A8MUU1 101 aa17.03■□□□□ 0.32
NME3-202ENST00000561637 H3BVH4 76 aa17.03■□□□□ 0.32
NME3-202ENST00000561637 SH2D1AO60880 128 aa17.03■□□□□ 0.32
NME3-202ENST00000561637 RHOHQ15669 191 aa17.03■□□□□ 0.32
NME3-202ENST00000561637 HIST1H2BAQ96A08 127 aa17.03■□□□□ 0.32
NME3-202ENST00000561637 TRAV9-2A0A087WT02 112 aa17.02■□□□□ 0.32
NME3-202ENST00000561637 A0A087WTM6 91 aa17.02■□□□□ 0.32
NME3-202ENST00000561637 B4DEV8 164 aa17.02■□□□□ 0.32
NME3-202ENST00000561637 S100A4P26447 101 aaKnown RBP17.02■□□□□ 0.32
NME3-202ENST00000561637 ASIPP42127 132 aa17.02■□□□□ 0.32
NME3-202ENST00000561637 TIRAPP58753 221 aa17.02■□□□□ 0.32
NME3-202ENST00000561637 ERVFC1-1P60608 527 aa17.02■□□□□ 0.32
NME3-202ENST00000561637 CST9LP1Q5W188 147 aa17.02■□□□□ 0.32
NME3-202ENST00000561637 PRADC1Q9BSG0 188 aa17.02■□□□□ 0.32
NME3-202ENST00000561637 KRBOX1C9JBD0 128 aa17.01■□□□□ 0.31
NME3-202ENST00000561637 LGALSLQ3ZCW2 172 aaPredicted RBP17.01■□□□□ 0.31
NME3-202ENST00000561637 Q5VSD8 79 aa17.01■□□□□ 0.31
NME3-202ENST00000561637 Q8N3U1 123 aa17.01■□□□□ 0.31
NME3-202ENST00000561637 TMSB15BA0A087X1C1 80 aa17■□□□□ 0.31
NME3-202ENST00000561637 PAGE4O60829 102 aa17■□□□□ 0.31
NME3-202ENST00000561637 SH2D6Q7Z4S9 175 aa17■□□□□ 0.31
NME3-202ENST00000561637 NFE4Q86UQ8 179 aa17■□□□□ 0.31
NME3-202ENST00000561637 FAM213BQ8TBF2 198 aa17■□□□□ 0.31
NME3-202ENST00000561637 NKX6-2Q9C056 277 aaPredicted RBP17■□□□□ 0.31
NME3-202ENST00000561637 IGHV3-38A0A0C4DH36 116 aa16.99■□□□□ 0.31
NME3-202ENST00000561637 ZNF345Q14585 488 aa16.99■□□□□ 0.31
NME3-202ENST00000561637 DMRTA1Q5VZB9 504 aa16.99■□□□□ 0.31
NME3-202ENST00000561637 UFSP1Q6NVU6 142 aa16.99■□□□□ 0.31
NME3-202ENST00000561637 GAGE12JA6NER3 117 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 IGHV3-30P01768 117 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 IGHV3-33P01772 117 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 ARMS2P0C7Q2 107 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 IGHV3-30-3P0DP02 117 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 IGHV3-30-5P0DP03 117 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 GAGE1Q13065 139 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 GAGE4Q13068 117 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 GAGE5Q13069 117 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 GAGE13Q4V321 117 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 OR10J3Q5JRS4 329 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 COX8CQ7Z4L0 72 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 C14orf178Q8N769 122 aaPredicted RBP16.98■□□□□ 0.31
NME3-202ENST00000561637 FMC1Q96HJ9 113 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 IL36BQ9NZH7 164 aa16.98■□□□□ 0.31
NME3-202ENST00000561637 LTAP01374 205 aa16.97■□□□□ 0.31
NME3-202ENST00000561637 LINC00694P0DN24 101 aa16.97■□□□□ 0.31
NME3-202ENST00000561637 MGST1P10620 155 aaKnown RBP16.97■□□□□ 0.31
NME3-202ENST00000561637 UBE2G1P62253 170 aa16.97■□□□□ 0.31
NME3-202ENST00000561637 LINC01556Q5JQF7 62 aa16.97■□□□□ 0.31
NME3-202ENST00000561637 ATP6V0E2Q8NHE4 81 aa16.97■□□□□ 0.31
NME3-202ENST00000561637 SFT2D1Q8WV19 159 aa16.97■□□□□ 0.31
NME3-202ENST00000561637 ZNF471Q9BX82 626 aaPredicted RBP16.97■□□□□ 0.31
NME3-202ENST00000561637 ZFP30Q9Y2G7 519 aa16.97■□□□□ 0.31
NME3-202ENST00000561637 BCL2L11O43521 198 aa16.96■□□□□ 0.31
NME3-202ENST00000561637 CIDEAO60543 219 aa16.96■□□□□ 0.31
NME3-202ENST00000561637 AKR1C3P42330 323 aa16.96■□□□□ 0.31
NME3-202ENST00000561637 FAM162BQ5T6X4 162 aa16.96■□□□□ 0.31
NME3-202ENST00000561637 STOML3Q8TAV4 291 aa16.96■□□□□ 0.31
NME3-202ENST00000561637 SCO2A0A1W2PP80 73 aa16.95■□□□□ 0.3
NME3-202ENST00000561637 A8MWV9 139 aa16.95■□□□□ 0.3
NME3-202ENST00000561637 SEC11BP0C7V7 166 aa16.95■□□□□ 0.3
NME3-202ENST00000561637 ZNF674Q2M3X9 581 aa16.95■□□□□ 0.3
NME3-202ENST00000561637 LELP1Q5T871 98 aa16.95■□□□□ 0.3
NME3-202ENST00000561637 MBD3L1Q8WWY6 194 aa16.95■□□□□ 0.3
NME3-202ENST00000561637 GTSF1LQ9H1H1 148 aa16.95■□□□□ 0.3
NME3-202ENST00000561637 Q9HAA7 133 aa16.95■□□□□ 0.3
NME3-202ENST00000561637 SRRM2Q9UQ35 2752 aaKnown RBP16.95■□□□□ 0.3
NME3-202ENST00000561637 TRBV6-1A0A0K0K1D8 114 aa16.94■□□□□ 0.3
NME3-202ENST00000561637 HMSDA8MTL9 139 aa16.94■□□□□ 0.3
NME3-202ENST00000561637 KRTAP10-1P60331 282 aa16.94■□□□□ 0.3
NME3-202ENST00000561637 DNLZQ5SXM8 178 aa16.94■□□□□ 0.3
NME3-202ENST00000561637 ZFP2Q6ZN57 461 aa16.94■□□□□ 0.3
NME3-202ENST00000561637 C10orf126Q8N4M7 172 aa16.94■□□□□ 0.3
NME3-202ENST00000561637 TRAV8-6A0A0B4J262 113 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms