RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ZNF506Q5JVG8 444 aa13.82□□□□□ -0.2
TSPAN3-210ENST00000561277 PRR27Q6MZM9 219 aa13.82□□□□□ -0.2
TSPAN3-210ENST00000561277 MLST8Q9BVC4 326 aa13.82□□□□□ -0.2
TSPAN3-210ENST00000561277 ICOSQ9Y6W8 199 aa13.82□□□□□ -0.2
TSPAN3-210ENST00000561277 PDE6DO43924 150 aa13.81□□□□□ -0.2
TSPAN3-210ENST00000561277 FAM3BP58499 235 aaPredicted RBP13.81□□□□□ -0.2
TSPAN3-210ENST00000561277 BLOC1S1P78537 153 aa13.81□□□□□ -0.2
TSPAN3-210ENST00000561277 VAX2Q9UIW0 290 aa13.81□□□□□ -0.2
TSPAN3-210ENST00000561277 ESRGQ1W209 222 aa13.8□□□□□ -0.2
TSPAN3-210ENST00000561277 LINC01559Q495D7 138 aa13.8□□□□□ -0.2
TSPAN3-210ENST00000561277 CENPWQ5EE01 88 aa13.8□□□□□ -0.2
TSPAN3-210ENST00000561277 IL36BQ9NZH7 164 aa13.8□□□□□ -0.2
TSPAN3-210ENST00000561277 FRAS1Q86XX4 4008 aa13.8□□□□□ -0.2
TSPAN3-210ENST00000561277 IGHV3-73A0A0B4J1V6 119 aa13.79□□□□□ -0.2
TSPAN3-210ENST00000561277 ARMS2P0C7Q2 107 aa13.79□□□□□ -0.2
TSPAN3-210ENST00000561277 CFAP126Q5VTH2 177 aa13.79□□□□□ -0.2
TSPAN3-210ENST00000561277 ZNRF2Q8NHG8 242 aa13.79□□□□□ -0.2
TSPAN3-210ENST00000561277 MED9Q9NWA0 146 aa13.79□□□□□ -0.2
TSPAN3-210ENST00000561277 RPL19P84098 196 aaKnown RBP13.79□□□□□ -0.2
TSPAN3-210ENST00000561277 RAB19A4D1S5 217 aa13.78□□□□□ -0.2
TSPAN3-210ENST00000561277 RS1O15537 224 aa13.78□□□□□ -0.2
TSPAN3-210ENST00000561277 GYPEP15421 78 aa13.78□□□□□ -0.2
TSPAN3-210ENST00000561277 TAGLN2P37802 199 aaKnown RBP13.78□□□□□ -0.2
TSPAN3-210ENST00000561277 PCNPQ8WW12 178 aaKnown RBP13.78□□□□□ -0.2
TSPAN3-210ENST00000561277 PTH2Q96A98 100 aa13.78□□□□□ -0.2
TSPAN3-210ENST00000561277 MGST1P10620 155 aaKnown RBP13.77□□□□□ -0.21
TSPAN3-210ENST00000561277 GNG4P50150 75 aa13.77□□□□□ -0.21
TSPAN3-210ENST00000561277 MRPL23Q16540 153 aaKnown RBP13.77□□□□□ -0.21
TSPAN3-210ENST00000561277 DNLZQ5SXM8 178 aa13.77□□□□□ -0.21
TSPAN3-210ENST00000561277 ZNF575Q86XF7 245 aa13.77□□□□□ -0.21
TSPAN3-210ENST00000561277 GATA1P15976 413 aaPredicted RBP13.76□□□□□ -0.21
TSPAN3-210ENST00000561277 PHLDA3Q9Y5J5 127 aa13.76□□□□□ -0.21
TSPAN3-210ENST00000561277 LOC100131303A0A0U1RQF7 123 aa13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 K7EQD1 137 aa13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 DMRTA1Q5VZB9 504 aa13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 SYT8Q8NBV8 401 aa13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 DNAH10Q8IVF4 4471 aa13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 SRIP30626 198 aa13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 Q6ZR54 194 aa13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 LYPD6BQ8NI32 183 aa13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 JPT2Q9H910 190 aa13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 MRPS16Q9Y3D3 137 aaKnown RBP13.75□□□□□ -0.21
TSPAN3-210ENST00000561277 TRBV20OR9-2A0A075B6H5 130 aa13.74□□□□□ -0.21
TSPAN3-210ENST00000561277 A8MWV9 139 aa13.74□□□□□ -0.21
TSPAN3-210ENST00000561277 M0R381 172 aa13.74□□□□□ -0.21
TSPAN3-210ENST00000561277 PARLQ9H300 379 aa13.74□□□□□ -0.21
TSPAN3-210ENST00000561277 RBFOX3A6NFN3 312 aa13.73□□□□□ -0.21
TSPAN3-210ENST00000561277 CIDEAO60543 219 aa13.73□□□□□ -0.21
TSPAN3-210ENST00000561277 IGLV2-8P01709 118 aa13.73□□□□□ -0.21
TSPAN3-210ENST00000561277 PIK3CD-AS1Q5SR53 167 aa13.73□□□□□ -0.21
TSPAN3-210ENST00000561277 NEGR1Q7Z3B1 354 aa13.73□□□□□ -0.21
TSPAN3-210ENST00000561277 SLC25A29Q8N8R3 303 aa13.73□□□□□ -0.21
TSPAN3-210ENST00000561277 Q9H8V8 135 aa13.73□□□□□ -0.21
TSPAN3-210ENST00000561277 SCRT2Q9NQ03 307 aa13.73□□□□□ -0.21
TSPAN3-210ENST00000561277 DNAH2Q9P225 4427 aa13.72□□□□□ -0.21
TSPAN3-210ENST00000561277 NBDYA0A0U1RRE5 68 aa13.72□□□□□ -0.21
TSPAN3-210ENST00000561277 UPK3BQ9BT76 320 aa13.72□□□□□ -0.21
TSPAN3-210ENST00000561277 RHOHQ15669 191 aa13.71□□□□□ -0.21
TSPAN3-210ENST00000561277 TOR2AQ5JU69 321 aa13.71□□□□□ -0.21
TSPAN3-210ENST00000561277 ZFP82Q8N141 532 aa13.71□□□□□ -0.21
TSPAN3-210ENST00000561277 DAZAP1Q96EP5 407 aaKnown RBP13.71□□□□□ -0.21
TSPAN3-210ENST00000561277 SMIM12Q96EX1 92 aa13.71□□□□□ -0.21
TSPAN3-210ENST00000561277 SAMD10Q9BYL1 202 aa13.71□□□□□ -0.21
TSPAN3-210ENST00000561277 FAM74A4Q5TZK3 123 aa13.71□□□□□ -0.22
TSPAN3-210ENST00000561277 LYPD5Q6UWN5 251 aa13.71□□□□□ -0.22
TSPAN3-210ENST00000561277 PRADC1Q9BSG0 188 aa13.71□□□□□ -0.22
TSPAN3-210ENST00000561277 TRBV6-4A0A1B0GX49 114 aa13.7□□□□□ -0.22
TSPAN3-210ENST00000561277 CXCL1P09341 107 aa13.7□□□□□ -0.22
TSPAN3-210ENST00000561277 MED14OSP0DP75 135 aa13.7□□□□□ -0.22
TSPAN3-210ENST00000561277 CEBPGP53567 150 aa13.7□□□□□ -0.22
TSPAN3-210ENST00000561277 A0A087WWL8 130 aa13.69□□□□□ -0.22
TSPAN3-210ENST00000561277 MUC21A0A0G2JKD1 596 aa13.69□□□□□ -0.22
TSPAN3-210ENST00000561277 MUC21A0A140T8X8 626 aa13.69□□□□□ -0.22
TSPAN3-210ENST00000561277 ZFP2Q6ZN57 461 aa13.69□□□□□ -0.22
TSPAN3-210ENST00000561277 Q6ZSN1 163 aa13.69□□□□□ -0.22
TSPAN3-210ENST00000561277 OR10AG1Q8NH19 301 aa13.69□□□□□ -0.22
TSPAN3-210ENST00000561277 EIF5A2Q9GZV4 153 aaKnown RBP13.69□□□□□ -0.22
TSPAN3-210ENST00000561277 C19orf71A6NCJ1 209 aa13.68□□□□□ -0.22
TSPAN3-210ENST00000561277 RTL8CO15255 209 aa13.68□□□□□ -0.22
TSPAN3-210ENST00000561277 NXPH4O95158 308 aa13.68□□□□□ -0.22
TSPAN3-210ENST00000561277 GZMBP10144 247 aa13.68□□□□□ -0.22
TSPAN3-210ENST00000561277 OR2D3Q8NGH3 330 aa13.68□□□□□ -0.22
TSPAN3-210ENST00000561277 TMEM250H0YL14 139 aa13.67□□□□□ -0.22
TSPAN3-210ENST00000561277 SSTP61278 116 aa13.67□□□□□ -0.22
TSPAN3-210ENST00000561277 C1orf134Q5TEV5 83 aa13.67□□□□□ -0.22
TSPAN3-210ENST00000561277 UFSP1Q6NVU6 142 aa13.67□□□□□ -0.22
TSPAN3-210ENST00000561277 TEX261Q6UWH6 196 aa13.67□□□□□ -0.22
TSPAN3-210ENST00000561277 SFRP2Q96HF1 295 aa13.67□□□□□ -0.22
TSPAN3-210ENST00000561277 TPPP3Q9BW30 176 aa13.67□□□□□ -0.22
TSPAN3-210ENST00000561277 RHODO00212 210 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 P01737 135 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 SOHLH1Q5JUK2 328 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 BIN3Q9NQY0 253 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 SIVA1O15304 175 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 SNAI2O43623 268 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 TTC32Q5I0X7 151 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 SPANXN1Q5VSR9 72 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 LINC00336Q6ZUF6 198 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 SH2D6Q7Z4S9 175 aa13.66□□□□□ -0.22
TSPAN3-210ENST00000561277 FAM210AQ96ND0 272 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms