RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 TMEM208Q9BTX3 173 aa6.08□□□□□ -1.44
SMAD3-212ENST00000559937 SMIM2Q9BVW6 85 aa6.08□□□□□ -1.44
SMAD3-212ENST00000559937 ZMAT4Q9H898 229 aa6.08□□□□□ -1.44
SMAD3-212ENST00000559937 PHLDA3Q9Y5J5 127 aa6.08□□□□□ -1.44
SMAD3-212ENST00000559937 ZFHX3Q15911 3703 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 CSPG4Q6UVK1 2322 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 TRAV2A0A0B4J234 112 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 A0A0J9YX75 114 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 C7orf71A4D174 169 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 GAS8-AS1O95177 125 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 RNASE3P12724 160 aaKnown RBP6.07□□□□□ -1.44
SMAD3-212ENST00000559937 HLA-DRB4P13762 266 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 RNASE4P34096 147 aaKnown RBP6.07□□□□□ -1.44
SMAD3-212ENST00000559937 SNRPD3P62318 126 aaKnown RBP6.07□□□□□ -1.44
SMAD3-212ENST00000559937 ODF1Q14990 250 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 ORMDL2Q53FV1 153 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 Q5PR19 223 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 BOD1L2Q8IYS8 172 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 TMEM86BQ8N661 226 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 TMEM158Q8WZ71 300 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 HLA-DRB4X5D2U9 266 aa6.07□□□□□ -1.44
SMAD3-212ENST00000559937 AKAP9Q99996 3911 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 MUC4Q99102 2169 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 F6UB75 175 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 CD5LO43866 347 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 SMIM17P0DL12 118 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 FGF6P10767 208 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 GATA1P15976 413 aaPredicted RBP6.06□□□□□ -1.44
SMAD3-212ENST00000559937 G0S2P27469 103 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 TFPI2P48307 235 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 ANKRD39Q53RE8 183 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 MPV17L2Q567V2 206 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 BVES-AS1Q5T3Y7 98 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 FAM159AQ6UWV7 190 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 Q6ZQT7 251 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 C2orf91Q6ZV80 131 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 MCRIP2Q9BUT9 160 aaKnown RBP6.06□□□□□ -1.44
SMAD3-212ENST00000559937 COX11Q9Y6N1 276 aa6.06□□□□□ -1.44
SMAD3-212ENST00000559937 IGKV3-7A0A075B6H7 116 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 IGHV4OR15-8A0A075B7B6 117 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 A0A087WW49 117 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 TRAV12-1A0A0B4J245 112 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 A8MTW9 85 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 J3KRW8 73 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 HOXA3O43365 443 aaPredicted RBP6.05□□□□□ -1.44
SMAD3-212ENST00000559937 DPM2O94777 84 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 NUDT3O95989 172 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 FXYD7P58549 80 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 SUMO2P61956 95 aaKnown RBP6.05□□□□□ -1.44
SMAD3-212ENST00000559937 SEC11AP67812 179 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 FOXI2Q6ZQN5 318 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 WFDC12Q8WWY7 111 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 RASL10AQ92737 203 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 C9orf85Q96MD7 179 aa6.05□□□□□ -1.44
SMAD3-212ENST00000559937 NIPBLQ6KC79 2804 aaeCLIP6.04□□□□□ -1.44
SMAD3-212ENST00000559937 GNRH2O43555 120 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 IGKCP01834 107 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 PRSS1P07477 247 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 ZNF688P0C7X2 276 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 EDN2P20800 178 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 HOXD3P31249 432 aaPredicted RBP6.04□□□□□ -1.44
SMAD3-212ENST00000559937 DEFB1P60022 68 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 HSD52Q0P140 79 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 C10orf99Q6UWK7 81 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 MAPK1IP1LQ8NDC0 245 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 TOMM6Q96B49 74 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 FOXC2Q99958 501 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 HIGD1BQ9P298 99 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 KIF25-AS1Q9Y6Z4 181 aa6.04□□□□□ -1.44
SMAD3-212ENST00000559937 A0A087WX48 190 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 TRAV26-2A0A0B4J265 109 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 TRBV6-5A0A0K0K1A5 114 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.03□□□□□ -1.44
SMAD3-212ENST00000559937 MGPP08493 103 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 SRD5A1P18405 259 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 PLNP26678 52 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 CDKN1BP46527 198 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 SYNJ2BPP57105 145 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 KRTAP10-9P60411 292 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 TMEM97Q5BJF2 176 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 WFDC3Q8IUB2 231 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 KRTAP1-3Q8IUG1 177 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 C14orf178Q8N769 122 aaPredicted RBP6.03□□□□□ -1.44
SMAD3-212ENST00000559937 SYT8Q8NBV8 401 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 Q96MF0 132 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 C18orf15Q96N68 181 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 DKK2Q9UBU2 259 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 NF1P21359 2839 aa6.03□□□□□ -1.44
SMAD3-212ENST00000559937 TRGV11A0A075B6L2 103 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 IGHV1OR15-1A0A075B7D0 117 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 IGHV3-16A0A0C4DH30 117 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 LINC01619G3V211 115 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 CD7P09564 240 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 LINC00315P59091 139 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 TCTEX1D4Q5JR98 221 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 AMTNQ6UX39 209 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 C4orf3Q8WVX3 66 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 PEMTQ9UBM1 199 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 HHLA3Q9XRX5 114 aa6.02□□□□□ -1.45
SMAD3-212ENST00000559937 TLN2Q9Y4G6 2542 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms