RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 RBMY1FQ15415 496 aaKnown RBP8.99□□□□□ -0.97
TPM1-209ENST00000558072 LGALS9BQ3B8N2 356 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 SPANXN1Q5VSR9 72 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 TPPP3Q9BW30 176 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 RETNQ9HD89 108 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 TIMM8BQ9Y5J9 83 aaPredicted RBP8.99□□□□□ -0.97
TPM1-209ENST00000558072 NOTCH1P46531 2555 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 IGHV4-4A0A075B6R2 117 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 CIDEAO60543 219 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 TRGC1P0CF51 173 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 NUP35Q8NFH5 326 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 RNASE8Q8TDE3 154 aaKnown RBP8.98□□□□□ -0.97
TPM1-209ENST00000558072 PGLYRP4Q96LB8 373 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 B9D2Q9BPU9 175 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 CNFNQ9BYD5 112 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 SCRT2Q9NQ03 307 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 NBEAL1Q6ZS30 2694 aa8.98□□□□□ -0.97
TPM1-209ENST00000558072 TRBV24-1A0A075B6N3 115 aa8.97□□□□□ -0.97
TPM1-209ENST00000558072 H3BVH4 76 aa8.97□□□□□ -0.97
TPM1-209ENST00000558072 LYZL1Q6UWQ5 148 aa8.97□□□□□ -0.97
TPM1-209ENST00000558072 GTSF1Q8WW33 167 aa8.97□□□□□ -0.97
TPM1-209ENST00000558072 LYRM9A8MSI8 78 aa8.96□□□□□ -0.98
TPM1-209ENST00000558072 GZMBP10144 247 aa8.96□□□□□ -0.98
TPM1-209ENST00000558072 RNASE3P12724 160 aaKnown RBP8.96□□□□□ -0.98
TPM1-209ENST00000558072 ATRAIDQ6UW56 229 aa8.96□□□□□ -0.98
TPM1-209ENST00000558072 Q6ZQT7 251 aa8.96□□□□□ -0.98
TPM1-209ENST00000558072 TM2D3Q9BRN9 247 aa8.96□□□□□ -0.98
TPM1-209ENST00000558072 OVOL2Q9BRP0 275 aa8.96□□□□□ -0.98
TPM1-209ENST00000558072 MDFICQ9P1T7 246 aa8.96□□□□□ -0.98
TPM1-209ENST00000558072 X6R8D5 127 aa8.96□□□□□ -0.98
TPM1-209ENST00000558072 A8MWV9 139 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 MT-ND6P03923 174 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 SMIM17P0DL12 118 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 FAM3BP58499 235 aaPredicted RBP8.95□□□□□ -0.98
TPM1-209ENST00000558072 HBBP68871 147 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 TWIST1Q15672 202 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 ZNF876PQ49A33 203 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 SBSPONQ8IVN8 264 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 C11orf72Q8NBR9 251 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 RASL10AQ92737 203 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 AP1S3Q96PC3 154 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 C11orf68Q9H3H3 251 aaKnown RBP8.95□□□□□ -0.98
TPM1-209ENST00000558072 GSN-AS1Q9NRJ2 163 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 URGCP-MRPS24S4R325 110 aa8.95□□□□□ -0.98
TPM1-209ENST00000558072 NXPH4O95158 308 aa8.94□□□□□ -0.98
TPM1-209ENST00000558072 SPART-AS1P0CW21 52 aa8.94□□□□□ -0.98
TPM1-209ENST00000558072 AZU1P20160 251 aa8.94□□□□□ -0.98
TPM1-209ENST00000558072 NTF3P20783 257 aa8.94□□□□□ -0.98
TPM1-209ENST00000558072 ELOBQ15370 118 aa8.94□□□□□ -0.98
TPM1-209ENST00000558072 FRZBQ92765 325 aa8.94□□□□□ -0.98
TPM1-209ENST00000558072 MEGF8Q7Z7M0 2845 aa8.94□□□□□ -0.98
TPM1-209ENST00000558072 M0R381 172 aa8.93□□□□□ -0.98
TPM1-209ENST00000558072 RHODO00212 210 aa8.93□□□□□ -0.98
TPM1-209ENST00000558072 SPINK4O60575 86 aa8.93□□□□□ -0.98
TPM1-209ENST00000558072 TMEM88Q6PEY1 159 aa8.93□□□□□ -0.98
TPM1-209ENST00000558072 ZNF575Q86XF7 245 aa8.93□□□□□ -0.98
TPM1-209ENST00000558072 IL17DQ8TAD2 202 aa8.93□□□□□ -0.98
TPM1-209ENST00000558072 FAM210BQ96KR6 192 aa8.93□□□□□ -0.98
TPM1-209ENST00000558072 NOP10Q9NPE3 64 aaKnown RBP8.93□□□□□ -0.98
TPM1-209ENST00000558072 TRGV1A0A0A0MS02 117 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 IGHV4-28A0A0C4DH34 117 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 HLA-DQA1P01909 254 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 PRM2P04554 102 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 CBLN2Q8IUK8 224 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 Q8NAQ8 132 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 OR10AG1Q8NH19 301 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 C18orf15Q96N68 181 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 GNB1LQ9BYB4 327 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 TMEM191AQ9H0A3 160 aa8.92□□□□□ -0.98
TPM1-209ENST00000558072 MRPL54Q6P161 138 aaKnown RBP8.91□□□□□ -0.98
TPM1-209ENST00000558072 DPH3P1Q9H4G8 78 aa8.91□□□□□ -0.98
TPM1-209ENST00000558072 TRGV2A0A075B6R0 118 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 A0A1B0GXF2 115 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 PPP1R17O96001 155 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 CAMPP49913 170 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 EMP1P54849 157 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 RAB4BP61018 213 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 SLAQ13239 276 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 ZFP2Q6ZN57 461 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 GATD1Q8NB37 220 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 DKK2Q9UBU2 259 aa8.9□□□□□ -0.98
TPM1-209ENST00000558072 PLAC8L1A1L4L8 177 aa8.89□□□□□ -0.99
TPM1-209ENST00000558072 H7C1H1 209 aa8.89□□□□□ -0.99
TPM1-209ENST00000558072 DAD1P61803 113 aa8.89□□□□□ -0.99
TPM1-209ENST00000558072 OR4C5Q8NGB2 326 aa8.89□□□□□ -0.99
TPM1-209ENST00000558072 YPEL4Q96NS1 127 aa8.89□□□□□ -0.99
TPM1-209ENST00000558072 PRKDCP78527 4128 aaKnown RBP8.88□□□□□ -0.99
TPM1-209ENST00000558072 TGIF2-C20orf24A0A0A6YYL0 155 aa8.88□□□□□ -0.99
TPM1-209ENST00000558072 RS1O15537 224 aa8.88□□□□□ -0.99
TPM1-209ENST00000558072 PPBPP02775 128 aa8.88□□□□□ -0.99
TPM1-209ENST00000558072 FAM222AQ5U5X8 452 aa8.88□□□□□ -0.99
TPM1-209ENST00000558072 LINC00612Q8N6U2 182 aa8.88□□□□□ -0.99
TPM1-209ENST00000558072 MRPL16Q9NX20 251 aaKnown RBP8.88□□□□□ -0.99
TPM1-209ENST00000558072 DNAH9Q9NYC9 4486 aa8.88□□□□□ -0.99
TPM1-209ENST00000558072 MUC21A0A0G2JKD1 596 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 MUC21A0A140T8X8 626 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 GAGE12BA1L429 117 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms