RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 ERG28Q9UKR5 140 aa13.34□□□□□ -0.27
PTPN21-208ENST00000556564 IGHV3-30P01768 117 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 IGHV3-33P01772 117 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 IGHV3-30-3P0DP02 117 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 IGHV3-30-5P0DP03 117 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 C11orf52Q96A22 123 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 ARHGAP21Q5T5U3 1957 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 CCDC140Q96MF4 163 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 Q6ZSV7 163 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 C18orf32Q8TCD1 76 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 ORAOV1Q8WV07 137 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 IGHG4P01861 327 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 ESDP10768 282 aa13.33□□□□□ -0.28
PTPN21-208ENST00000556564 A8MWP6 167 aa13.32□□□□□ -0.28
PTPN21-208ENST00000556564 TSPAN13O95857 204 aa13.32□□□□□ -0.28
PTPN21-208ENST00000556564 XCL1P47992 114 aa13.32□□□□□ -0.28
PTPN21-208ENST00000556564 CCL18P55774 89 aa13.32□□□□□ -0.28
PTPN21-208ENST00000556564 IGLL1P15814 213 aa13.32□□□□□ -0.28
PTPN21-208ENST00000556564 INSL3P51460 131 aa13.32□□□□□ -0.28
PTPN21-208ENST00000556564 LENEPQ9Y5L5 61 aa13.32□□□□□ -0.28
PTPN21-208ENST00000556564 K7EQD1 137 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 K7ERU9 68 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 NXPH4O95158 308 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 RNF152Q8N8N0 203 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 NKAPP1Q8N9T2 125 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 STPG4Q8N801 248 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 SIGLEC8Q9NYZ4 499 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 H3BMM0 161 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 C10orf99Q6UWK7 81 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 UBE2WQ96B02 151 aa13.31□□□□□ -0.28
PTPN21-208ENST00000556564 SMIM2Q9BVW6 85 aa13.3□□□□□ -0.28
PTPN21-208ENST00000556564 PRSS29PA6NIE9 313 aa13.3□□□□□ -0.28
PTPN21-208ENST00000556564 PROP1O75360 226 aa13.3□□□□□ -0.28
PTPN21-208ENST00000556564 HSD52Q0P140 79 aa13.3□□□□□ -0.28
PTPN21-208ENST00000556564 Q8N1Y9 231 aa13.3□□□□□ -0.28
PTPN21-208ENST00000556564 MAP6D1Q9H9H5 199 aa13.3□□□□□ -0.28
PTPN21-208ENST00000556564 A0A1B0GV90 55 aa13.3□□□□□ -0.28
PTPN21-208ENST00000556564 KLF5Q13887 457 aaPredicted RBP13.3□□□□□ -0.28
PTPN21-208ENST00000556564 LINC00574Q9H8X3 128 aa13.3□□□□□ -0.28
PTPN21-208ENST00000556564 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.29□□□□□ -0.28
PTPN21-208ENST00000556564 SPINK8P0C7L1 97 aa13.29□□□□□ -0.28
PTPN21-208ENST00000556564 MRPL23Q16540 153 aaKnown RBP13.29□□□□□ -0.28
PTPN21-208ENST00000556564 Q6ZPA2 131 aa13.29□□□□□ -0.28
PTPN21-208ENST00000556564 CRIP3Q6Q6R5 217 aa13.29□□□□□ -0.28
PTPN21-208ENST00000556564 CHD3Q12873 2000 aaKnown RBP13.29□□□□□ -0.28
PTPN21-208ENST00000556564 FSTL3O95633 263 aa13.28□□□□□ -0.28
PTPN21-208ENST00000556564 SUMO4Q6EEV6 95 aa13.28□□□□□ -0.28
PTPN21-208ENST00000556564 A0A087X0K7 114 aa13.28□□□□□ -0.28
PTPN21-208ENST00000556564 ZNF493Q6ZR52 646 aa13.28□□□□□ -0.28
PTPN21-208ENST00000556564 ATP6V0E2Q8NHE4 81 aa13.28□□□□□ -0.28
PTPN21-208ENST00000556564 IGLL5B9A064 214 aa13.27□□□□□ -0.28
PTPN21-208ENST00000556564 SHISA2Q6UWI4 295 aa13.27□□□□□ -0.28
PTPN21-208ENST00000556564 LOC105371267A0A1B0GV96 52 aa13.27□□□□□ -0.29
PTPN21-208ENST00000556564 GATA1P15976 413 aaPredicted RBP13.27□□□□□ -0.29
PTPN21-208ENST00000556564 RPL39LQ96EH5 51 aaKnown RBP13.27□□□□□ -0.29
PTPN21-208ENST00000556564 LAMTOR3Q9UHA4 124 aa13.26□□□□□ -0.29
PTPN21-208ENST00000556564 KLK5Q9Y337 293 aaPredicted RBP13.26□□□□□ -0.29
PTPN21-208ENST00000556564 F8WEM9 126 aa13.26□□□□□ -0.29
PTPN21-208ENST00000556564 IGF1P05019 195 aa13.26□□□□□ -0.29
PTPN21-208ENST00000556564 HHLA3Q9XRX5 114 aa13.26□□□□□ -0.29
PTPN21-208ENST00000556564 NCOA6Q14686 2063 aaPredicted RBP13.26□□□□□ -0.29
PTPN21-208ENST00000556564 Q0VG73 95 aa13.26□□□□□ -0.29
PTPN21-208ENST00000556564 DOPEY2Q9Y3R5 2298 aa13.26□□□□□ -0.29
PTPN21-208ENST00000556564 LY6LH3BQJ8 138 aa13.26□□□□□ -0.29
PTPN21-208ENST00000556564 FAM167A-AS1Q96KT0 104 aa13.26□□□□□ -0.29
PTPN21-208ENST00000556564 NAA38Q9BRA0 125 aaKnown RBP13.26□□□□□ -0.29
PTPN21-208ENST00000556564 IGLV10-54A0A075B6I4 117 aa13.25□□□□□ -0.29
PTPN21-208ENST00000556564 C20orf78Q9BR46 151 aa13.25□□□□□ -0.29
PTPN21-208ENST00000556564 C9orf47Q6ZRZ4 202 aa13.25□□□□□ -0.29
PTPN21-208ENST00000556564 C1orf43Q9BWL3 253 aa13.25□□□□□ -0.29
PTPN21-208ENST00000556564 ZNF479Q96JC4 524 aa13.24□□□□□ -0.29
PTPN21-208ENST00000556564 ZNF702PQ9H963 129 aa13.23□□□□□ -0.29
PTPN21-208ENST00000556564 CREBBPQ92793 2442 aa13.23□□□□□ -0.29
PTPN21-208ENST00000556564 HERVK_113P63121 156 aa13.23□□□□□ -0.29
PTPN21-208ENST00000556564 BRWD1-AS2P59051 145 aa13.23□□□□□ -0.29
PTPN21-208ENST00000556564 ATXN8Q156A1 80 aa13.23□□□□□ -0.29
PTPN21-208ENST00000556564 SAMD5Q5TGI4 173 aa13.22□□□□□ -0.29
PTPN21-208ENST00000556564 MSRB1Q9NZV6 116 aa13.22□□□□□ -0.29
PTPN21-208ENST00000556564 ZNF48Q96MX3 618 aaPredicted RBP13.22□□□□□ -0.29
PTPN21-208ENST00000556564 CDK2AP2O75956 126 aa13.22□□□□□ -0.29
PTPN21-208ENST00000556564 FAM110AQ9BQ89 295 aa13.21□□□□□ -0.29
PTPN21-208ENST00000556564 A0A0J9YX75 114 aa13.21□□□□□ -0.29
PTPN21-208ENST00000556564 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.21□□□□□ -0.29
PTPN21-208ENST00000556564 LINC00482Q8N8I6 264 aa13.21□□□□□ -0.29
PTPN21-208ENST00000556564 IGKV1D-37A0A075B6S9 117 aa13.21□□□□□ -0.3
PTPN21-208ENST00000556564 TRAV8-2A0A0B4J237 113 aa13.21□□□□□ -0.3
PTPN21-208ENST00000556564 RPL18AQ02543 176 aaKnown RBP13.21□□□□□ -0.3
PTPN21-208ENST00000556564 AMTNQ6UX39 209 aa13.21□□□□□ -0.3
PTPN21-208ENST00000556564 EDA2RQ9HAV5 297 aa13.21□□□□□ -0.3
PTPN21-208ENST00000556564 HIVEP2P31629 2446 aa13.2□□□□□ -0.3
PTPN21-208ENST00000556564 IGLC2P0DOY2 106 aa13.2□□□□□ -0.3
PTPN21-208ENST00000556564 C18orf65Q6ZTR6 163 aa13.2□□□□□ -0.3
PTPN21-208ENST00000556564 TTC32Q5I0X7 151 aa13.2□□□□□ -0.3
PTPN21-208ENST00000556564 C11orf45Q8TAV5 145 aa13.2□□□□□ -0.3
PTPN21-208ENST00000556564 DNAJC30Q96LL9 226 aa13.2□□□□□ -0.3
PTPN21-208ENST00000556564 ZNF124Q15973 351 aa13.2□□□□□ -0.3
PTPN21-208ENST00000556564 BBC3Q96PG8 261 aaPredicted RBP13.2□□□□□ -0.3
PTPN21-208ENST00000556564 KIAA1549Q9HCM3 1950 aa13.19□□□□□ -0.3
PTPN21-208ENST00000556564 DEFB114Q30KQ6 69 aa13.19□□□□□ -0.3
PTPN21-208ENST00000556564 C5orf38Q86SI9 138 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms