RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 MDKP21741 143 aaPredicted RBP3.74□□□□□ -1.81
VPS29-210ENST00000552130 HINT1P49773 126 aaPredicted RBP3.74□□□□□ -1.81
VPS29-210ENST00000552130 DAPK1P53355 1430 aa3.74□□□□□ -1.81
VPS29-210ENST00000552130 CCL8P80075 99 aa3.74□□□□□ -1.81
VPS29-210ENST00000552130 ERHP84090 104 aaKnown RBP3.74□□□□□ -1.81
VPS29-210ENST00000552130 DEFA5Q01523 94 aa3.74□□□□□ -1.81
VPS29-210ENST00000552130 SLC48A1Q6P1K1 146 aa3.74□□□□□ -1.81
VPS29-210ENST00000552130 LHFPL6Q9Y693 200 aa3.74□□□□□ -1.81
VPS29-210ENST00000552130 PCNX2A6NKB5 2137 aa3.74□□□□□ -1.81
VPS29-210ENST00000552130 PDCD5O14737 125 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 NUPR1O60356 82 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 IGKV3-11P04433 115 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 P0C880 135 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 CXCL8P10145 99 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 PRB4P10163 310 aaPredicted RBP3.73□□□□□ -1.81
VPS29-210ENST00000552130 C9orf116Q5BN46 136 aaPredicted RBP3.73□□□□□ -1.81
VPS29-210ENST00000552130 C2orf82Q6UX34 121 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 Q8TAT8 98 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 FAM213BQ8TBF2 198 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 MGST2Q99735 147 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 LINC00474Q9P2X8 69 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 RABAC1Q9UI14 185 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 FREM3P0C091 2139 aa3.73□□□□□ -1.81
VPS29-210ENST00000552130 CASZ1Q86V15 1759 aa3.72□□□□□ -1.81
VPS29-210ENST00000552130 TRAV12-1A0A0B4J245 112 aa3.72□□□□□ -1.81
VPS29-210ENST00000552130 GNG11P61952 73 aa3.72□□□□□ -1.81
VPS29-210ENST00000552130 SEC11AP67812 179 aa3.72□□□□□ -1.81
VPS29-210ENST00000552130 PPDPFLQ8WWR9 84 aa3.72□□□□□ -1.81
VPS29-210ENST00000552130 NDUFB11Q9NX14 153 aa3.72□□□□□ -1.81
VPS29-210ENST00000552130 PLIN4Q96Q06 1357 aa3.72□□□□□ -1.81
VPS29-210ENST00000552130 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.72□□□□□ -1.81
VPS29-210ENST00000552130 HEATR5BQ9P2D3 2071 aa3.72□□□□□ -1.81
VPS29-210ENST00000552130 CLIP1P30622 1438 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 ARHGAP32A7KAX9 2087 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 NINQ8N4C6 2090 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 RNASE2P10153 161 aaKnown RBP3.71□□□□□ -1.82
VPS29-210ENST00000552130 ADIRFQ15847 76 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 CLECL1Q8IZS7 167 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 C9orf163Q8N9P6 203 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 SPTSSBQ8NFR3 76 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 MYOZ3Q8TDC0 251 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 CYTL1Q9NRR1 136 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 PSORS1C2Q9UIG4 136 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 SMAD5-AS1Q9Y6J3 95 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 COL2A1P02458 1487 aaPredicted RBP3.71□□□□□ -1.82
VPS29-210ENST00000552130 GOLGA3Q08378 1498 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 EML5Q05BV3 1969 aa3.71□□□□□ -1.82
VPS29-210ENST00000552130 PRDM15P57071 1507 aaPredicted RBP3.7□□□□□ -1.82
VPS29-210ENST00000552130 MYH8P13535 1937 aa3.7□□□□□ -1.82
VPS29-210ENST00000552130 NAP1L6A6NFF2 107 aa3.7□□□□□ -1.82
VPS29-210ENST00000552130 IGKV3-15P01624 115 aa3.7□□□□□ -1.82
VPS29-210ENST00000552130 LINC00299Q6ZSB3 139 aa3.7□□□□□ -1.82
VPS29-210ENST00000552130 PLXNA2O75051 1894 aa3.7□□□□□ -1.82
VPS29-210ENST00000552130 TRPM7Q96QT4 1865 aa3.7□□□□□ -1.82
VPS29-210ENST00000552130 COL24A1Q17RW2 1714 aa3.7□□□□□ -1.82
VPS29-210ENST00000552130 POLA1P09884 1462 aaPredicted RBP3.69□□□□□ -1.82
VPS29-210ENST00000552130 TRAV40A0A0B4J280 105 aa3.69□□□□□ -1.82
VPS29-210ENST00000552130 TRBV10-3A0A0K0K1G6 114 aa3.69□□□□□ -1.82
VPS29-210ENST00000552130 MUC21A0A140T8X8 626 aa3.69□□□□□ -1.82
VPS29-210ENST00000552130 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
VPS29-210ENST00000552130 Q9BRP9 147 aa3.69□□□□□ -1.82
VPS29-210ENST00000552130 ST20Q9HBF5 79 aa3.69□□□□□ -1.82
VPS29-210ENST00000552130 RPS10P5Q9NQ39 176 aa3.69□□□□□ -1.82
VPS29-210ENST00000552130 KIF20BQ96Q89 1820 aa3.69□□□□□ -1.82
VPS29-210ENST00000552130 CACNA1DQ01668 2161 aa3.69□□□□□ -1.82
VPS29-210ENST00000552130 LAMC3Q9Y6N6 1575 aa3.68□□□□□ -1.82
VPS29-210ENST00000552130 TRAV13-2A0A0B4J235 113 aa3.68□□□□□ -1.82
VPS29-210ENST00000552130 H3BRM9 83 aa3.68□□□□□ -1.82
VPS29-210ENST00000552130 ZNF833PQ6ZTB9 187 aa3.68□□□□□ -1.82
VPS29-210ENST00000552130 OR10AG1Q8NH19 301 aa3.68□□□□□ -1.82
VPS29-210ENST00000552130 CACFD1Q9UGQ2 172 aa3.68□□□□□ -1.82
VPS29-210ENST00000552130 SPCS1Q9Y6A9 102 aa3.68□□□□□ -1.82
VPS29-210ENST00000552130 TOPAZ1Q8N9V7 1692 aa3.68□□□□□ -1.82
VPS29-210ENST00000552130 ADAMTS12P58397 1594 aa3.68□□□□□ -1.82
VPS29-210ENST00000552130 LRRIQ1Q96JM4 1722 aa3.67□□□□□ -1.82
VPS29-210ENST00000552130 ANK1P16157 1881 aa3.67□□□□□ -1.82
VPS29-210ENST00000552130 HCG22E2RYF7 251 aa3.67□□□□□ -1.82
VPS29-210ENST00000552130 KRTAP26-1Q6PEX3 210 aa3.67□□□□□ -1.82
VPS29-210ENST00000552130 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
VPS29-210ENST00000552130 ZNF431Q8TF32 576 aaPredicted RBP3.67□□□□□ -1.82
VPS29-210ENST00000552130 TRGV9Q99603 122 aa3.67□□□□□ -1.82
VPS29-210ENST00000552130 RP1P56715 2156 aa3.67□□□□□ -1.82
VPS29-210ENST00000552130 PTPRFP10586 1907 aa3.67□□□□□ -1.82
VPS29-210ENST00000552130 MON2Q7Z3U7 1717 aa3.67□□□□□ -1.82
VPS29-210ENST00000552130 LRP5O75197 1615 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 PPLO60437 1756 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 ARHGEF12Q9NZN5 1544 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 IGLV3-16A0A075B6K0 115 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 A0A1W2PNM2 257 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 CRYM-AS1A6NIL9 109 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 C2orf70A6NJV1 201 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 CCL16O15467 120 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 LY6EQ16553 131 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 CMTM2Q8TAZ6 248 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 CYP4F30PQ9H0H9 118 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
VPS29-210ENST00000552130 ATRXP46100 2492 aa3.65□□□□□ -1.82
VPS29-210ENST00000552130 NDUFC1O43677 76 aa3.65□□□□□ -1.83
VPS29-210ENST00000552130 DSCR10P59022 87 aa3.65□□□□□ -1.83
VPS29-210ENST00000552130 AMELYQ99218 206 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms