RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 GCHFRP30047 84 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 CDC34P49427 236 aaPredicted RBP7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 SUMO1P63165 101 aaKnown RBP7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 LINC01559Q495D7 138 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 Q5BKY6 102 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 LELP1Q5T871 98 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 SH2D6Q7Z4S9 175 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 DAZ4Q86SG3 579 aaKnown RBP7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 PRNTQ86SH4 94 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 HSD17B11Q8NBQ5 300 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 ATP6V0E2Q8NHE4 81 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 SUN5Q8TC36 379 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 SAMD10Q9BYL1 202 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 GTSF1LQ9H1H1 148 aa7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 DAZ3Q9NR90 486 aaKnown RBP7.65□□□□□ -1.18
PRPF40B-212ENST00000551111 A6NHS1 94 aa7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 PET100P0DJ07 73 aa7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 ATP6V0CP27449 155 aa7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 FLI1Q01543 452 aaPredicted RBP7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 RHOHQ15669 191 aa7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 C5orf17Q8NAS9 161 aa7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 NTN5Q8WTR8 489 aaPredicted RBP7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 PRADC1Q9BSG0 188 aa7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 SH3BGRL3Q9H299 93 aa7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 PARLQ9H300 379 aa7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 EPDR1Q9UM22 224 aa7.64□□□□□ -1.19
PRPF40B-212ENST00000551111 GAGE12JA6NER3 117 aa7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 TAAR5O14804 337 aa7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 LINC00694P0DN24 101 aa7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 GAGE1Q13065 139 aa7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 GAGE4Q13068 117 aa7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 GAGE5Q13069 117 aa7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 GAGE13Q4V321 117 aa7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 C14orf178Q8N769 122 aaPredicted RBP7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 OR2T35Q8NGX2 323 aa7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 ALG5Q9Y673 324 aa7.63□□□□□ -1.19
PRPF40B-212ENST00000551111 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.62□□□□□ -1.19
PRPF40B-212ENST00000551111 SMUG1Q53HV7 270 aa7.62□□□□□ -1.19
PRPF40B-212ENST00000551111 UFSP1Q6NVU6 142 aa7.62□□□□□ -1.19
PRPF40B-212ENST00000551111 Q6ZSA8 131 aa7.62□□□□□ -1.19
PRPF40B-212ENST00000551111 OR2G3Q8NGZ4 309 aa7.62□□□□□ -1.19
PRPF40B-212ENST00000551111 PTH2Q96A98 100 aa7.62□□□□□ -1.19
PRPF40B-212ENST00000551111 NDFIP1Q9BT67 221 aa7.62□□□□□ -1.19
PRPF40B-212ENST00000551111 MGST1P10620 155 aaKnown RBP7.61□□□□□ -1.19
PRPF40B-212ENST00000551111 CRIP1P50238 77 aa7.61□□□□□ -1.19
PRPF40B-212ENST00000551111 ZNF726P1Q15940 193 aa7.61□□□□□ -1.19
PRPF40B-212ENST00000551111 CYB561D1Q8N8Q1 229 aa7.61□□□□□ -1.19
PRPF40B-212ENST00000551111 BAALCQ8WXS3 180 aa7.61□□□□□ -1.19
PRPF40B-212ENST00000551111 ARL2-SNX15V9GYD0 113 aa7.61□□□□□ -1.19
PRPF40B-212ENST00000551111 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
PRPF40B-212ENST00000551111 SERTM2A0A1B0GWG4 89 aa7.6□□□□□ -1.19
PRPF40B-212ENST00000551111 LAGE3Q14657 143 aa7.6□□□□□ -1.19
PRPF40B-212ENST00000551111 LGALSLQ3ZCW2 172 aaPredicted RBP7.6□□□□□ -1.19
PRPF40B-212ENST00000551111 PSMG3Q9BT73 122 aaPredicted RBP7.6□□□□□ -1.19
PRPF40B-212ENST00000551111 H3BVH4 76 aa7.59□□□□□ -1.19
PRPF40B-212ENST00000551111 CIDEAO60543 219 aa7.59□□□□□ -1.19
PRPF40B-212ENST00000551111 UBE2G2P60604 165 aa7.59□□□□□ -1.19
PRPF40B-212ENST00000551111 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
PRPF40B-212ENST00000551111 RPL7L1Q6DKI1 246 aaKnown RBP7.59□□□□□ -1.19
PRPF40B-212ENST00000551111 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.19
PRPF40B-212ENST00000551111 AQP10Q96PS8 301 aa7.59□□□□□ -1.19
PRPF40B-212ENST00000551111 PKHD1L1Q86WI1 4243 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 GRIFINA4D1Z8 144 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 J3QL48 77 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 K7EQM0 130 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 M0R036 132 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 CXorf1O96002 111 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 C1QBP02746 253 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 FGF8P55075 233 aaPredicted RBP7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 DEFA1P59665 94 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 DEFA3P59666 94 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 ZFP2Q6ZN57 461 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 ZC2HC1AQ96GY0 325 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 TM2D2Q9BX73 214 aa7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 ACTR3CQ9C0K3 210 aaPredicted RBP7.58□□□□□ -1.2
PRPF40B-212ENST00000551111 A0A087WWL8 130 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 A0A1W2PRE2 83 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 RNF222A6NCQ9 220 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 FABP5P3A8MUU1 101 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 A8MWV9 139 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 KRBOX1C9JBD0 128 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 ARMS2P0C7Q2 107 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 S100A4P26447 101 aaKnown RBP7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 SERF2P84101 59 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 ZFP69Q49AA0 526 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 SAPCD1Q5SSQ6 148 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 SCXQ7RTU7 201 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 Q86TA4 180 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 TMEM167BQ9NRX6 74 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 IL36BQ9NZH7 164 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 TNFSF18Q9UNG2 199 aa7.57□□□□□ -1.2
PRPF40B-212ENST00000551111 TRAV8-3A0A0A6YYJ7 113 aa7.56□□□□□ -1.2
PRPF40B-212ENST00000551111 FAM74A7A6NL05 159 aa7.56□□□□□ -1.2
PRPF40B-212ENST00000551111 B4DEV8 164 aa7.56□□□□□ -1.2
PRPF40B-212ENST00000551111 PEX7O00628 323 aa7.56□□□□□ -1.2
PRPF40B-212ENST00000551111 SH2D1AO60880 128 aa7.56□□□□□ -1.2
PRPF40B-212ENST00000551111 IFNA7P01567 189 aa7.56□□□□□ -1.2
PRPF40B-212ENST00000551111 ASIPP42127 132 aa7.56□□□□□ -1.2
PRPF40B-212ENST00000551111 FAM74A4Q5TZK3 123 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms