RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MAP1LC3BQ9GZQ8 125 aa8.83□□□□□ -1
NPAS3-209ENST00000551008 ABCA13Q86UQ4 5058 aa8.83□□□□□ -1
NPAS3-209ENST00000551008 FBLL1A6NHQ2 334 aaKnown RBP8.82□□□□□ -1
NPAS3-209ENST00000551008 ORM1P02763 201 aa8.82□□□□□ -1
NPAS3-209ENST00000551008 ZNF345Q14585 488 aa8.82□□□□□ -1
NPAS3-209ENST00000551008 COX8CQ7Z4L0 72 aa8.82□□□□□ -1
NPAS3-209ENST00000551008 SLC25A29Q8N8R3 303 aa8.82□□□□□ -1
NPAS3-209ENST00000551008 ZC2HC1AQ96GY0 325 aa8.82□□□□□ -1
NPAS3-209ENST00000551008 DNAH10OSP0CZ25 163 aa8.81□□□□□ -1
NPAS3-209ENST00000551008 FUSP35637 526 aaKnown RBP eCLIP8.81□□□□□ -1
NPAS3-209ENST00000551008 SAPCD1Q5SSQ6 148 aa8.81□□□□□ -1
NPAS3-209ENST00000551008 Q9UF83 564 aa8.81□□□□□ -1
NPAS3-209ENST00000551008 IGHV3-73A0A0B4J1V6 119 aa8.8□□□□□ -1
NPAS3-209ENST00000551008 CDK2AP2O75956 126 aa8.8□□□□□ -1
NPAS3-209ENST00000551008 IFNA7P01567 189 aa8.8□□□□□ -1
NPAS3-209ENST00000551008 LINC00694P0DN24 101 aa8.8□□□□□ -1
NPAS3-209ENST00000551008 TIRAPP58753 221 aa8.8□□□□□ -1
NPAS3-209ENST00000551008 ZFP69Q49AA0 526 aa8.8□□□□□ -1
NPAS3-209ENST00000551008 UFSP1Q6NVU6 142 aa8.8□□□□□ -1
NPAS3-209ENST00000551008 PCNPQ8WW12 178 aaKnown RBP8.8□□□□□ -1
NPAS3-209ENST00000551008 HIST1H2BAQ96A08 127 aa8.8□□□□□ -1
NPAS3-209ENST00000551008 JPT2Q9H910 190 aa8.8□□□□□ -1
NPAS3-209ENST00000551008 TRBV6-1A0A0K0K1D8 114 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 TRBV6-4A0A1B0GX49 114 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 HMSDA8MTL9 139 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 KRBOX1C9JBD0 128 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 SH2D1AO60880 128 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 DNLZQ5SXM8 178 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 MBD3L1Q8WWY6 194 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 TXNDC17Q9BRA2 123 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 SAMD10Q9BYL1 202 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 PARLQ9H300 379 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 LY96Q9Y6Y9 160 aa8.79□□□□□ -1
NPAS3-209ENST00000551008 FABP5P3A8MUU1 101 aa8.78□□□□□ -1
NPAS3-209ENST00000551008 SEC11BP0C7V7 166 aa8.78□□□□□ -1
NPAS3-209ENST00000551008 NKX6-2Q9C056 277 aaPredicted RBP8.78□□□□□ -1
NPAS3-209ENST00000551008 IL36BQ9NZH7 164 aa8.78□□□□□ -1
NPAS3-209ENST00000551008 H3BVH4 76 aa8.77□□□□□ -1.01
NPAS3-209ENST00000551008 M0R036 132 aa8.77□□□□□ -1.01
NPAS3-209ENST00000551008 BCL2L11O43521 198 aa8.77□□□□□ -1.01
NPAS3-209ENST00000551008 PAGE4O60829 102 aa8.77□□□□□ -1.01
NPAS3-209ENST00000551008 LTAP01374 205 aa8.77□□□□□ -1.01
NPAS3-209ENST00000551008 PPT1P50897 306 aa8.77□□□□□ -1.01
NPAS3-209ENST00000551008 RHOHQ15669 191 aa8.77□□□□□ -1.01
NPAS3-209ENST00000551008 ZNF674Q2M3X9 581 aa8.77□□□□□ -1.01
NPAS3-209ENST00000551008 NHLRC2Q8NBF2 726 aa8.77□□□□□ -1.01
NPAS3-209ENST00000551008 A0A087WTM6 91 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 A0A1B0GV50 99 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 GRIFINA4D1Z8 144 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 B4DEV8 164 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 CIDEAO60543 219 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 ASIPP42127 132 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 PIK3CD-AS1Q5SR53 167 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 CST9LP1Q5W188 147 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 Q8N3U1 123 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 FAM213BQ8TBF2 198 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 FMC1Q96HJ9 113 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 ZNF471Q9BX82 626 aaPredicted RBP8.76□□□□□ -1.01
NPAS3-209ENST00000551008 SCRT2Q9NQ03 307 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 MSRB1Q9NZV6 116 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 ZFP30Q9Y2G7 519 aa8.76□□□□□ -1.01
NPAS3-209ENST00000551008 A0A0D9SG52 128 aa8.75□□□□□ -1.01
NPAS3-209ENST00000551008 SCO2A0A1W2PP80 73 aa8.75□□□□□ -1.01
NPAS3-209ENST00000551008 CRYGDP07320 174 aa8.75□□□□□ -1.01
NPAS3-209ENST00000551008 ARMS2P0C7Q2 107 aa8.75□□□□□ -1.01
NPAS3-209ENST00000551008 MGST1P10620 155 aaKnown RBP8.75□□□□□ -1.01
NPAS3-209ENST00000551008 LINC01556Q5JQF7 62 aa8.75□□□□□ -1.01
NPAS3-209ENST00000551008 ZFP2Q6ZN57 461 aa8.75□□□□□ -1.01
NPAS3-209ENST00000551008 SH2D6Q7Z4S9 175 aa8.75□□□□□ -1.01
NPAS3-209ENST00000551008 C14orf178Q8N769 122 aaPredicted RBP8.75□□□□□ -1.01
NPAS3-209ENST00000551008 SFT2D1Q8WV19 159 aa8.75□□□□□ -1.01
NPAS3-209ENST00000551008 TCEAL7Q9BRU2 100 aa8.75□□□□□ -1.01
NPAS3-209ENST00000551008 IGHV3-38A0A0C4DH36 116 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 A8MWV9 139 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 UMAD1C9J7I0 102 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 EVI2AP22794 236 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 FAM162BQ5T6X4 162 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 TMUB2Q71RG4 321 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 STOML3Q8TAV4 291 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 PRADC1Q9BSG0 188 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 MLST8Q9BVC4 326 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 FAT1Q14517 4588 aa8.74□□□□□ -1.01
NPAS3-209ENST00000551008 TMSB15BA0A087X1C1 80 aa8.73□□□□□ -1.01
NPAS3-209ENST00000551008 K7EP13 123 aa8.73□□□□□ -1.01
NPAS3-209ENST00000551008 S100A4P26447 101 aaKnown RBP8.73□□□□□ -1.01
NPAS3-209ENST00000551008 AKR1C3P42330 323 aa8.73□□□□□ -1.01
NPAS3-209ENST00000551008 ERVFC1-1P60608 527 aa8.73□□□□□ -1.01
NPAS3-209ENST00000551008 UBE2G1P62253 170 aa8.73□□□□□ -1.01
NPAS3-209ENST00000551008 CCL20P78556 96 aa8.73□□□□□ -1.01
NPAS3-209ENST00000551008 RPL19P84098 196 aaKnown RBP8.73□□□□□ -1.01
NPAS3-209ENST00000551008 LGALSLQ3ZCW2 172 aaPredicted RBP8.73□□□□□ -1.01
NPAS3-209ENST00000551008 LELP1Q5T871 98 aa8.73□□□□□ -1.01
NPAS3-209ENST00000551008 NFE4Q86UQ8 179 aa8.73□□□□□ -1.01
NPAS3-209ENST00000551008 ATP6V0E2Q8NHE4 81 aa8.73□□□□□ -1.01
NPAS3-209ENST00000551008 TRAV9-2A0A087WT02 112 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 KANTRA0A1W2PQU2 76 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 LRCOL1A6NCL2 159 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 GAGE12JA6NER3 117 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 IBA57-AS1B1ANH7 110 aa8.72□□□□□ -1.01
NPAS3-209ENST00000551008 LORP23490 312 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms