RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 OR4C5Q8NGB2 326 aa11.4□□□□□ -0.58
CHMP1A-209ENST00000550872 PTH2Q96A98 100 aa11.4□□□□□ -0.58
CHMP1A-209ENST00000550872 NACAE9PAV3 2078 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 LCE6AA0A183 80 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 C9JQL5 133 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 P01737 135 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 SFTA3P0C7M3 94 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 CLLU1Q5K131 121 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 POM121L12Q8N7R1 296 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 OR2D3Q8NGH3 330 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 ZNF479Q96JC4 524 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 PHLDA3Q9Y5J5 127 aa11.39□□□□□ -0.59
CHMP1A-209ENST00000550872 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 TRGV4A0A0C4DH28 118 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 A0A0J9YY99 117 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 K7EN84 100 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 CXCL1P09341 107 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 C15orf53Q8NAA6 179 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 SYT8Q8NBV8 401 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 NUDT10Q8NFP7 164 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 NUDT11Q96G61 164 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 LY96Q9Y6Y9 160 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 SACSQ9NZJ4 4579 aa11.38□□□□□ -0.59
CHMP1A-209ENST00000550872 RS1O15537 224 aa11.37□□□□□ -0.59
CHMP1A-209ENST00000550872 NUDT3O95989 172 aa11.37□□□□□ -0.59
CHMP1A-209ENST00000550872 MED14OSP0DP75 135 aa11.37□□□□□ -0.59
CHMP1A-209ENST00000550872 FHL2Q14192 279 aa11.37□□□□□ -0.59
CHMP1A-209ENST00000550872 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
CHMP1A-209ENST00000550872 SCRT2Q9NQ03 307 aa11.37□□□□□ -0.59
CHMP1A-209ENST00000550872 STARD9Q9P2P6 4700 aa11.37□□□□□ -0.59
CHMP1A-209ENST00000550872 XKRY2A2RUG3 117 aa11.36□□□□□ -0.59
CHMP1A-209ENST00000550872 LY6G6CO95867 125 aa11.36□□□□□ -0.59
CHMP1A-209ENST00000550872 SLAQ13239 276 aa11.36□□□□□ -0.59
CHMP1A-209ENST00000550872 FAM74A3Q4VXF1 159 aa11.36□□□□□ -0.59
CHMP1A-209ENST00000550872 PIK3CD-AS1Q5SR53 167 aa11.36□□□□□ -0.59
CHMP1A-209ENST00000550872 LINC00476Q8WZB0 136 aa11.36□□□□□ -0.59
CHMP1A-209ENST00000550872 RNASE7Q9H1E1 156 aaKnown RBP11.36□□□□□ -0.59
CHMP1A-209ENST00000550872 DNAH1Q9P2D7 4330 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 M0R381 172 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 PAX4O43316 350 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 GZMBP10144 247 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 CFAP126Q5VTH2 177 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 ZFP82Q8N141 532 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 PRO0255Q9UI72 69 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 HHLA3Q9XRX5 114 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 RYR2Q92736 4967 aa11.35□□□□□ -0.59
CHMP1A-209ENST00000550872 A8MWV9 139 aa11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 H3BNG1 76 aa11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 CIDEAO60543 219 aa11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 SOHLH1Q5JUK2 328 aa11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 LGALS9CQ6DKI2 356 aa11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 LINC01551Q86U37 167 aa11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 VSIG2Q96IQ7 327 aa11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 SSBP4Q9BWG4 385 aaPredicted RBP11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 RPP21Q9H633 154 aaKnown RBP11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 JPT2Q9H910 190 aa11.34□□□□□ -0.59
CHMP1A-209ENST00000550872 IGHV3-73A0A0B4J1V6 119 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 MUC21A0A0G2JKD1 596 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 MUC21A0A140T8X8 626 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 SNAI2O43623 268 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 GATCO43716 136 aaKnown RBP11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 OR5AL1P0C617 328 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 CRYBA4P53673 196 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 ERVFC1-1P60608 527 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 FAM231DQ6ZW35 169 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 FER1L6-AS1Q8NA97 138 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 TPPP3Q9BW30 176 aa11.33□□□□□ -0.6
CHMP1A-209ENST00000550872 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
CHMP1A-209ENST00000550872 P0DMU3 169 aa11.32□□□□□ -0.6
CHMP1A-209ENST00000550872 FAM231AP0DMU4 169 aa11.32□□□□□ -0.6
CHMP1A-209ENST00000550872 FAM231CP0DMU5 169 aa11.32□□□□□ -0.6
CHMP1A-209ENST00000550872 SSTP61278 116 aa11.32□□□□□ -0.6
CHMP1A-209ENST00000550872 SPANXN1Q5VSR9 72 aa11.32□□□□□ -0.6
CHMP1A-209ENST00000550872 NAT8Q9UHE5 227 aa11.32□□□□□ -0.6
CHMP1A-209ENST00000550872 GATA1P15976 413 aaPredicted RBP11.31□□□□□ -0.6
CHMP1A-209ENST00000550872 SFRP2Q96HF1 295 aa11.31□□□□□ -0.6
CHMP1A-209ENST00000550872 SAMD10Q9BYL1 202 aa11.31□□□□□ -0.6
CHMP1A-209ENST00000550872 A0A1W2PPQ1 181 aa11.3□□□□□ -0.6
CHMP1A-209ENST00000550872 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
CHMP1A-209ENST00000550872 ADIRFQ15847 76 aa11.3□□□□□ -0.6
CHMP1A-209ENST00000550872 ZFP2Q6ZN57 461 aa11.3□□□□□ -0.6
CHMP1A-209ENST00000550872 UBE2DNLQ8IWF7 75 aa11.3□□□□□ -0.6
CHMP1A-209ENST00000550872 OSTCQ9NRP0 149 aa11.3□□□□□ -0.6
CHMP1A-209ENST00000550872 ICOSQ9Y6W8 199 aa11.3□□□□□ -0.6
CHMP1A-209ENST00000550872 A0A087WWL8 130 aa11.29□□□□□ -0.6
CHMP1A-209ENST00000550872 A8MWL6 223 aa11.29□□□□□ -0.6
CHMP1A-209ENST00000550872 F2Z2F3 143 aa11.29□□□□□ -0.6
CHMP1A-209ENST00000550872 NXPH4O95158 308 aa11.29□□□□□ -0.6
CHMP1A-209ENST00000550872 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
CHMP1A-209ENST00000550872 LYZL1Q6UWQ5 148 aa11.29□□□□□ -0.6
CHMP1A-209ENST00000550872 ISOC2Q96AB3 205 aa11.29□□□□□ -0.6
CHMP1A-209ENST00000550872 A0A096LPF7 62 aa11.28□□□□□ -0.6
CHMP1A-209ENST00000550872 RHODO00212 210 aa11.28□□□□□ -0.6
CHMP1A-209ENST00000550872 CRYGDP07320 174 aa11.28□□□□□ -0.6
CHMP1A-209ENST00000550872 GYPEP15421 78 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 199.5 ms