RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 OR4C5Q8NGB2 326 aa13.54□□□□□ -0.24
DDX54-207ENST00000550016 PCNPQ8WW12 178 aaKnown RBP13.54□□□□□ -0.24
DDX54-207ENST00000550016 TRGV4A0A0C4DH28 118 aa13.53□□□□□ -0.24
DDX54-207ENST00000550016 A0A0J9YY99 117 aa13.53□□□□□ -0.24
DDX54-207ENST00000550016 H3BVH4 76 aa13.53□□□□□ -0.24
DDX54-207ENST00000550016 SFTA3P0C7M3 94 aa13.53□□□□□ -0.24
DDX54-207ENST00000550016 ARMS2P0C7Q2 107 aa13.53□□□□□ -0.24
DDX54-207ENST00000550016 ZNF479Q96JC4 524 aa13.53□□□□□ -0.24
DDX54-207ENST00000550016 PARLQ9H300 379 aa13.53□□□□□ -0.24
DDX54-207ENST00000550016 BIN3Q9NQY0 253 aa13.53□□□□□ -0.24
DDX54-207ENST00000550016 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
DDX54-207ENST00000550016 PIK3CD-AS1Q5SR53 167 aa13.52□□□□□ -0.25
DDX54-207ENST00000550016 DAZAP1Q96EP5 407 aaKnown RBP13.52□□□□□ -0.25
DDX54-207ENST00000550016 PRO0255Q9UI72 69 aa13.52□□□□□ -0.25
DDX54-207ENST00000550016 HHLA3Q9XRX5 114 aa13.52□□□□□ -0.25
DDX54-207ENST00000550016 PLECQ15149 4684 aaKnown RBP13.52□□□□□ -0.25
DDX54-207ENST00000550016 RS1O15537 224 aa13.51□□□□□ -0.25
DDX54-207ENST00000550016 PAX4O43316 350 aa13.51□□□□□ -0.25
DDX54-207ENST00000550016 CXCL1P09341 107 aa13.51□□□□□ -0.25
DDX54-207ENST00000550016 VSIG2Q96IQ7 327 aa13.51□□□□□ -0.25
DDX54-207ENST00000550016 C19orf71A6NCJ1 209 aa13.5□□□□□ -0.25
DDX54-207ENST00000550016 CIDEAO60543 219 aa13.5□□□□□ -0.25
DDX54-207ENST00000550016 CEBPGP53567 150 aa13.5□□□□□ -0.25
DDX54-207ENST00000550016 CRYBA4P53673 196 aa13.5□□□□□ -0.25
DDX54-207ENST00000550016 OCC1Q8TAD7 63 aa13.5□□□□□ -0.25
DDX54-207ENST00000550016 SCRT2Q9NQ03 307 aa13.5□□□□□ -0.25
DDX54-207ENST00000550016 ALMS1Q8TCU4 4167 aa13.5□□□□□ -0.25
DDX54-207ENST00000550016 SRP19P09132 144 aaKnown RBP13.49□□□□□ -0.25
DDX54-207ENST00000550016 MED14OSP0DP75 135 aa13.49□□□□□ -0.25
DDX54-207ENST00000550016 RNF212Q495C1 297 aa13.49□□□□□ -0.25
DDX54-207ENST00000550016 CFAP126Q5VTH2 177 aa13.49□□□□□ -0.25
DDX54-207ENST00000550016 SYT8Q8NBV8 401 aa13.49□□□□□ -0.25
DDX54-207ENST00000550016 PHLDA3Q9Y5J5 127 aa13.49□□□□□ -0.25
DDX54-207ENST00000550016 DMRTA1Q5VZB9 504 aa13.48□□□□□ -0.25
DDX54-207ENST00000550016 UBE2DNLQ8IWF7 75 aa13.48□□□□□ -0.25
DDX54-207ENST00000550016 A8MWV9 139 aa13.47□□□□□ -0.25
DDX54-207ENST00000550016 RPS20P60866 119 aaKnown RBP13.47□□□□□ -0.25
DDX54-207ENST00000550016 OR2D3Q8NGH3 330 aa13.47□□□□□ -0.25
DDX54-207ENST00000550016 K7EN84 100 aa13.46□□□□□ -0.25
DDX54-207ENST00000550016 P01737 135 aa13.46□□□□□ -0.25
DDX54-207ENST00000550016 RAB14P61106 215 aa13.46□□□□□ -0.25
DDX54-207ENST00000550016 PEA15Q15121 130 aa13.46□□□□□ -0.25
DDX54-207ENST00000550016 ZFP82Q8N141 532 aa13.46□□□□□ -0.25
DDX54-207ENST00000550016 SMIM7Q9BQ49 75 aa13.46□□□□□ -0.25
DDX54-207ENST00000550016 A0A096LPF7 62 aa13.45□□□□□ -0.26
DDX54-207ENST00000550016 OR5AL1P0C617 328 aa13.45□□□□□ -0.26
DDX54-207ENST00000550016 GATA1P15976 413 aaPredicted RBP13.45□□□□□ -0.26
DDX54-207ENST00000550016 CCL18P55774 89 aa13.45□□□□□ -0.26
DDX54-207ENST00000550016 NUDT10Q8NFP7 164 aa13.45□□□□□ -0.26
DDX54-207ENST00000550016 NUDT11Q96G61 164 aa13.45□□□□□ -0.26
DDX54-207ENST00000550016 SSBP4Q9BWG4 385 aaPredicted RBP13.45□□□□□ -0.26
DDX54-207ENST00000550016 SMDT1Q9H4I9 107 aa13.45□□□□□ -0.26
DDX54-207ENST00000550016 ICOSQ9Y6W8 199 aa13.45□□□□□ -0.26
DDX54-207ENST00000550016 LY96Q9Y6Y9 160 aa13.45□□□□□ -0.26
DDX54-207ENST00000550016 XKRY2A2RUG3 117 aa13.44□□□□□ -0.26
DDX54-207ENST00000550016 ZNF727A8MUV8 499 aa13.44□□□□□ -0.26
DDX54-207ENST00000550016 M0R381 172 aa13.44□□□□□ -0.26
DDX54-207ENST00000550016 SNAI2O43623 268 aa13.44□□□□□ -0.26
DDX54-207ENST00000550016 FAM3BP58499 235 aaPredicted RBP13.44□□□□□ -0.26
DDX54-207ENST00000550016 ZFP2Q6ZN57 461 aa13.44□□□□□ -0.26
DDX54-207ENST00000550016 JPT2Q9H910 190 aa13.44□□□□□ -0.26
DDX54-207ENST00000550016 IGHV3-73A0A0B4J1V6 119 aa13.43□□□□□ -0.26
DDX54-207ENST00000550016 SRSF3P84103 164 aaKnown RBP13.43□□□□□ -0.26
DDX54-207ENST00000550016 MRPL23Q16540 153 aaKnown RBP13.43□□□□□ -0.26
DDX54-207ENST00000550016 SFRP2Q96HF1 295 aa13.43□□□□□ -0.26
DDX54-207ENST00000550016 C9JQL5 133 aa13.42□□□□□ -0.26
DDX54-207ENST00000550016 GZMBP10144 247 aa13.42□□□□□ -0.26
DDX54-207ENST00000550016 GYPEP15421 78 aa13.42□□□□□ -0.26
DDX54-207ENST00000550016 FAM74A3Q4VXF1 159 aa13.42□□□□□ -0.26
DDX54-207ENST00000550016 OR10AG1Q8NH19 301 aa13.42□□□□□ -0.26
DDX54-207ENST00000550016 RNASE7Q9H1E1 156 aaKnown RBP13.42□□□□□ -0.26
DDX54-207ENST00000550016 TRBV6-4A0A1B0GX49 114 aa13.41□□□□□ -0.26
DDX54-207ENST00000550016 NXPH4O95158 308 aa13.41□□□□□ -0.26
DDX54-207ENST00000550016 IGLC6P0CF74 106 aa13.41□□□□□ -0.26
DDX54-207ENST00000550016 ESRGQ1W209 222 aa13.41□□□□□ -0.26
DDX54-207ENST00000550016 UFSP1Q6NVU6 142 aa13.41□□□□□ -0.26
DDX54-207ENST00000550016 SLC25A29Q8N8R3 303 aa13.41□□□□□ -0.26
DDX54-207ENST00000550016 FER1L6-AS1Q8NA97 138 aa13.41□□□□□ -0.26
DDX54-207ENST00000550016 SAMD10Q9BYL1 202 aa13.41□□□□□ -0.26
DDX54-207ENST00000550016 LINC00588Q9Y4M8 146 aa13.41□□□□□ -0.26
DDX54-207ENST00000550016 K7EQD1 137 aa13.4□□□□□ -0.26
DDX54-207ENST00000550016 RHODO00212 210 aa13.4□□□□□ -0.26
DDX54-207ENST00000550016 IFITM2Q01629 132 aa13.4□□□□□ -0.26
DDX54-207ENST00000550016 SPANXN1Q5VSR9 72 aa13.4□□□□□ -0.26
DDX54-207ENST00000550016 PRADC1Q9BSG0 188 aa13.4□□□□□ -0.26
DDX54-207ENST00000550016 RPP21Q9H633 154 aaKnown RBP13.4□□□□□ -0.26
DDX54-207ENST00000550016 DNAH1Q9P2D7 4330 aa13.4□□□□□ -0.26
DDX54-207ENST00000550016 MUC21A0A0G2JKD1 596 aa13.39□□□□□ -0.27
DDX54-207ENST00000550016 MUC21A0A140T8X8 626 aa13.39□□□□□ -0.27
DDX54-207ENST00000550016 F2Z2F3 143 aa13.39□□□□□ -0.27
DDX54-207ENST00000550016 TMEM241Q24JQ0 296 aa13.39□□□□□ -0.27
DDX54-207ENST00000550016 Q6ZSN1 163 aa13.39□□□□□ -0.27
DDX54-207ENST00000550016 FAM231DQ6ZW35 169 aa13.39□□□□□ -0.27
DDX54-207ENST00000550016 NEGR1Q7Z3B1 354 aa13.39□□□□□ -0.27
DDX54-207ENST00000550016 LINC01551Q86U37 167 aa13.39□□□□□ -0.27
DDX54-207ENST00000550016 TPPP3Q9BW30 176 aa13.39□□□□□ -0.27
DDX54-207ENST00000550016 A0A087WWL8 130 aa13.38□□□□□ -0.27
DDX54-207ENST00000550016 LOC100131303A0A0U1RQF7 123 aa13.38□□□□□ -0.27
DDX54-207ENST00000550016 A0A1W2PPQ1 181 aa13.38□□□□□ -0.27
DDX54-207ENST00000550016 GATCO43716 136 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms