RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 HBBP68871 147 aa5.25□□□□□ -1.57
DEPDC4-208ENST00000549341 FABP9Q0Z7S8 132 aa5.25□□□□□ -1.57
DEPDC4-208ENST00000549341 ACTL10Q5JWF8 245 aa5.25□□□□□ -1.57
DEPDC4-208ENST00000549341 SMIM15Q7Z3B0 74 aa5.25□□□□□ -1.57
DEPDC4-208ENST00000549341 KCNS1Q96KK3 526 aa5.25□□□□□ -1.57
DEPDC4-208ENST00000549341 PGLYRP4Q96LB8 373 aa5.25□□□□□ -1.57
DEPDC4-208ENST00000549341 SORL1Q92673 2214 aa5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 A0A0J9YX75 114 aa5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 A0A1B0GUT8 65 aa5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 SPINK4O60575 86 aa5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 CA1P00915 261 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 CRISP2P16562 243 aa5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 S100A4P26447 101 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 DEFB131AP59861 70 aa5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 MRPL54Q6P161 138 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 LINC00322Q6ZN03 302 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 ZFP82Q8N141 532 aa5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 FER1L6-AS1Q8NA97 138 aa5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 TPPP3Q9BW30 176 aa5.24□□□□□ -1.57
DEPDC4-208ENST00000549341 OR11H12B2RN74 326 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 APCSP02743 223 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 TRGC1P0CF51 173 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 EDN2P20800 178 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 CDKN1BP46527 198 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 CAMPP49913 170 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 CRIP1P50238 77 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 CACNG7P62955 275 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 CD300EQ496F6 205 aaPredicted RBP5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 FAM159AQ6UWV7 190 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 APRG1Q8IVJ8 170 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 TMEM61Q8N0U2 210 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 Q8N1Y9 231 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 DNAH11Q96DT5 4516 aa5.23□□□□□ -1.57
DEPDC4-208ENST00000549341 TMSB15BA0A087X1C1 80 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 C7orf71A4D174 169 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 F6UB75 175 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 ZNF705DP0CH99 300 aaPredicted RBP5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 ZNF705BP0CI00 300 aaPredicted RBP5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 HLA-DRB4P13762 266 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 S100A2P29034 98 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 RNASE4P34096 147 aaKnown RBP5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 ASIPP42127 132 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 NDUFA6P56556 154 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 NUTF2P61970 127 aaKnown RBP5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 TMEM136Q6ZRR5 245 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 GTSCR1Q86UQ5 136 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 STHQ8IWL8 128 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 ZFAND2AQ8N6M9 145 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 FAM19A4Q96LR4 140 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 CLUHP3Q96NS8 147 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 NAGKQ9UJ70 344 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 HLA-DRB4X5D2U9 266 aa5.22□□□□□ -1.57
DEPDC4-208ENST00000549341 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 A0A1B0GXF2 115 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 A8MZ25 164 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 KLLNB2CW77 178 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 J3KRW8 73 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST1H2BKO60814 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST1H2BJP06899 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 GZMBP10144 247 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST1H2BOP23527 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST1H2BBP33778 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 CTRLP40313 264 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 ZNF80P51504 273 aaPredicted RBP5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST1H2BDP58876 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST1H2BCP62807 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 TWIST1Q15672 202 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST2H2BEQ16778 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 SPANXN1Q5VSR9 72 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 LYZL1Q6UWQ5 148 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 SYT8Q8NBV8 401 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 GTSF1Q8WW33 167 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST1H2BHQ93079 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST1H2BNQ99877 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 HIST1H2BMQ99879 126 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 C20orf144Q9BQM9 153 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 MAP6D1Q9H9H5 199 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 SELENOKQ9Y6D0 94 aa5.21□□□□□ -1.58
DEPDC4-208ENST00000549341 DYNC1H1Q14204 4646 aaKnown RBP5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 GRIFINA4D1Z8 144 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 NUPR2A6NF83 97 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 H3BMM0 161 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 IGKV3-20P01619 116 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 IGLV1-51P01701 117 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 OR5AL1P0C617 328 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 IGLC6P0CF74 106 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 PRB4P10163 310 aaPredicted RBP5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 SNRPEP62304 92 aaKnown RBP5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 OR10J3Q5JRS4 329 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 BAGE3Q86Y29 109 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 GATD1Q8NB37 220 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 PHLDA3Q9Y5J5 127 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 VPS13DQ5THJ4 4388 aa5.2□□□□□ -1.58
DEPDC4-208ENST00000549341 UBR4Q5T4S7 5183 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 TRAV12-3A0A0B4J271 114 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 IGKV3D-20A0A0C4DH25 116 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 C5orf52A6NGY3 159 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 KNCNA6PVL3 124 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 A8MTW9 85 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms