RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 IGHV1-24A0A0C4DH33 117 aa12.89□□□□□ -0.35
RBFOX1-207ENST00000547338 LGALS9O00182 355 aa12.89□□□□□ -0.35
RBFOX1-207ENST00000547338 PET117Q6UWS5 81 aa12.89□□□□□ -0.35
RBFOX1-207ENST00000547338 APRG1Q8IVJ8 170 aa12.89□□□□□ -0.35
RBFOX1-207ENST00000547338 C2orf88Q9BSF0 95 aa12.89□□□□□ -0.35
RBFOX1-207ENST00000547338 SORL1Q92673 2214 aa12.89□□□□□ -0.35
RBFOX1-207ENST00000547338 TRAV21A0A0B4J279 112 aa12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 MED14OSP0DP75 135 aa12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 MRPL51Q4U2R6 128 aaKnown RBP12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 EBLN2Q6P2I7 272 aa12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 OR10AG1Q8NH19 301 aa12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 MAP1LC3CQ9BXW4 147 aa12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 TMEM213A2RRL7 107 aa12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 SNAI2O43623 268 aa12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 SPATA12Q7Z6I5 190 aa12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 FAM19A4Q96LR4 140 aa12.88□□□□□ -0.35
RBFOX1-207ENST00000547338 TRAV9-2A0A087WT02 112 aa12.87□□□□□ -0.35
RBFOX1-207ENST00000547338 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
RBFOX1-207ENST00000547338 CKS2P33552 79 aa12.87□□□□□ -0.35
RBFOX1-207ENST00000547338 D6R8Y8 96 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 M0R143 59 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 INSL3P51460 131 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 AMN1Q8IY45 258 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 DEFB125Q8N687 156 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 OR8A1Q8NGG7 326 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 UQCR10Q9UDW1 63 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 PAM16Q9Y3D7 125 aa12.86□□□□□ -0.35
RBFOX1-207ENST00000547338 LINC01546A6NGU7 62 aa12.85□□□□□ -0.35
RBFOX1-207ENST00000547338 SAP30O75446 220 aa12.85□□□□□ -0.35
RBFOX1-207ENST00000547338 SPATA45Q537H7 98 aa12.85□□□□□ -0.35
RBFOX1-207ENST00000547338 ODF3Q96PU9 254 aa12.85□□□□□ -0.35
RBFOX1-207ENST00000547338 PRSS47A8MTI9 375 aa12.84□□□□□ -0.35
RBFOX1-207ENST00000547338 RPL11P62913 178 aaKnown RBP12.84□□□□□ -0.35
RBFOX1-207ENST00000547338 TDRG1Q3Y452 100 aa12.84□□□□□ -0.35
RBFOX1-207ENST00000547338 TM4SF20Q53R12 229 aa12.84□□□□□ -0.35
RBFOX1-207ENST00000547338 ZNF256Q9Y2P7 627 aaPredicted RBP12.84□□□□□ -0.35
RBFOX1-207ENST00000547338 DEFB121Q5J5C9 76 aa12.83□□□□□ -0.35
RBFOX1-207ENST00000547338 ZFAND2AQ8N6M9 145 aa12.83□□□□□ -0.35
RBFOX1-207ENST00000547338 MAP1LC3AQ9H492 121 aa12.83□□□□□ -0.35
RBFOX1-207ENST00000547338 NXT2Q9NPJ8 142 aaKnown RBP12.83□□□□□ -0.35
RBFOX1-207ENST00000547338 SIGLEC8Q9NYZ4 499 aa12.83□□□□□ -0.35
RBFOX1-207ENST00000547338 SYNJ2BPP57105 145 aa12.83□□□□□ -0.36
RBFOX1-207ENST00000547338 ZNF705AQ6ZN79 300 aaPredicted RBP12.83□□□□□ -0.36
RBFOX1-207ENST00000547338 RNF185Q96GF1 192 aa12.83□□□□□ -0.36
RBFOX1-207ENST00000547338 STAB2Q8WWQ8 2551 aa12.82□□□□□ -0.36
RBFOX1-207ENST00000547338 CSN3P07498 182 aa12.82□□□□□ -0.36
RBFOX1-207ENST00000547338 PSMG4Q5JS54 123 aa12.82□□□□□ -0.36
RBFOX1-207ENST00000547338 C11orf21Q9P2W6 132 aa12.82□□□□□ -0.36
RBFOX1-207ENST00000547338 ZMAT5Q9UDW3 170 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-207ENST00000547338 IGLV1-51P01701 117 aa12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 IGLC3P0DOY3 106 aa12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 PRB4P10163 310 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 IFI27P40305 119 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 ADAMTSL5Q6ZMM2 481 aa12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 OR9G4Q8NGQ1 327 aa12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 DCANP1Q8TF63 244 aa12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 B9D2Q9BPU9 175 aa12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 MS4A6AQ9H2W1 248 aa12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 ST20Q9HBF5 79 aa12.81□□□□□ -0.36
RBFOX1-207ENST00000547338 OR4C46A6NHA9 309 aa12.79□□□□□ -0.36
RBFOX1-207ENST00000547338 HSBP1L1C9JCN9 74 aa12.79□□□□□ -0.36
RBFOX1-207ENST00000547338 HBDP02042 147 aa12.79□□□□□ -0.36
RBFOX1-207ENST00000547338 ASIPP42127 132 aa12.79□□□□□ -0.36
RBFOX1-207ENST00000547338 SNRPD3P62318 126 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-207ENST00000547338 LINC01545Q5VT33 79 aa12.79□□□□□ -0.36
RBFOX1-207ENST00000547338 MRAP2Q96G30 205 aa12.79□□□□□ -0.36
RBFOX1-207ENST00000547338 TENM3Q9P273 2699 aa12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 EDN2P20800 178 aa12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 LEPP41159 167 aa12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 SPANXN1Q5VSR9 72 aa12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 TRAV2A0A0B4J234 112 aa12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 KLLNB2CW77 178 aa12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 TNFRSF6BO95407 300 aa12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 PPP1R17O96001 155 aa12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 SCRT2Q9NQ03 307 aa12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 MRPS16Q9Y3D3 137 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-207ENST00000547338 DUSP14O95147 198 aaKnown RBP12.77□□□□□ -0.37
RBFOX1-207ENST00000547338 NPYP01303 97 aa12.77□□□□□ -0.37
RBFOX1-207ENST00000547338 Q8N8P6 123 aa12.77□□□□□ -0.37
RBFOX1-207ENST00000547338 MSRB1Q9NZV6 116 aa12.77□□□□□ -0.37
RBFOX1-207ENST00000547338 HUWE1Q7Z6Z7 4374 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-207ENST00000547338 K7EMI3 77 aa12.76□□□□□ -0.37
RBFOX1-207ENST00000547338 K7EQG2 157 aa12.76□□□□□ -0.37
RBFOX1-207ENST00000547338 S100A4P26447 101 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-207ENST00000547338 LGALS9BQ3B8N2 356 aa12.76□□□□□ -0.37
RBFOX1-207ENST00000547338 LGALS9CQ6DKI2 356 aa12.76□□□□□ -0.37
RBFOX1-207ENST00000547338 Q8N1Y9 231 aa12.76□□□□□ -0.37
RBFOX1-207ENST00000547338 SNHG12Q9BXW3 62 aa12.76□□□□□ -0.37
RBFOX1-207ENST00000547338 MUC21A0A0G2JKD1 596 aa12.75□□□□□ -0.37
RBFOX1-207ENST00000547338 MUC21A0A140T8X8 626 aa12.75□□□□□ -0.37
RBFOX1-207ENST00000547338 LOC389332A0A1B0GUA5 103 aa12.75□□□□□ -0.37
RBFOX1-207ENST00000547338 FCER1GP30273 86 aa12.75□□□□□ -0.37
RBFOX1-207ENST00000547338 TSPOP30536 169 aa12.75□□□□□ -0.37
RBFOX1-207ENST00000547338 MUC21Q5SSG8 566 aa12.75□□□□□ -0.37
RBFOX1-207ENST00000547338 PRR9Q5T870 116 aa12.75□□□□□ -0.37
RBFOX1-207ENST00000547338 OR2K2Q8NGT1 345 aa12.75□□□□□ -0.37
RBFOX1-207ENST00000547338 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
RBFOX1-207ENST00000547338 SSTP61278 116 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms