RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 A0A087WTM6 91 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 TRAV34A0A0B4J273 112 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 A8MWV9 139 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 PEX7O00628 323 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 ARPC5O15511 151 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 UBE2G2P60604 165 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 ZNF726P1Q15940 193 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 LINC01556Q5JQF7 62 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 OR10J3Q5JRS4 329 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 DPPA3Q6W0C5 159 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 ZFP2Q6ZN57 461 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 ATP6V0E2Q8NHE4 81 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 LINC00479Q96M42 142 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 TCEAL7Q9BRU2 100 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 ARL2-SNX15V9GYD0 113 aa6.34□□□□□ -1.39
YBX3-218ENST00000546298 FRAS1Q86XX4 4008 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 IGHV3-73A0A0B4J1V6 119 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 IGKV3D-20A0A0C4DH25 116 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 MAP1LC3B2A6NCE7 125 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 FAM74A7A6NL05 159 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 PSCAO43653 123 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 RNASE3P12724 160 aaKnown RBP6.33□□□□□ -1.4
YBX3-218ENST00000546298 FHITP49789 147 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 FGF8P55075 233 aaPredicted RBP6.33□□□□□ -1.4
YBX3-218ENST00000546298 UBE2G1P62253 170 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 LGALSLQ3ZCW2 172 aaPredicted RBP6.33□□□□□ -1.4
YBX3-218ENST00000546298 LELP1Q5T871 98 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 Q86TA4 180 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 FMC1Q96HJ9 113 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 MAP1LC3BQ9GZQ8 125 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 GTSF1LQ9H1H1 148 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 IL36BQ9NZH7 164 aa6.33□□□□□ -1.4
YBX3-218ENST00000546298 B4DEV8 164 aa6.32□□□□□ -1.4
YBX3-218ENST00000546298 RHODO00212 210 aa6.32□□□□□ -1.4
YBX3-218ENST00000546298 CST9LP1Q5W188 147 aa6.32□□□□□ -1.4
YBX3-218ENST00000546298 COX8CQ7Z4L0 72 aa6.32□□□□□ -1.4
YBX3-218ENST00000546298 PARLQ9H300 379 aa6.32□□□□□ -1.4
YBX3-218ENST00000546298 SCRT2Q9NQ03 307 aa6.32□□□□□ -1.4
YBX3-218ENST00000546298 CYTL1Q9NRR1 136 aa6.32□□□□□ -1.4
YBX3-218ENST00000546298 A0A087WWC5 75 aa6.31□□□□□ -1.4
YBX3-218ENST00000546298 TRBV6-1A0A0K0K1D8 114 aa6.31□□□□□ -1.4
YBX3-218ENST00000546298 IBA57-AS1B1ANH7 110 aa6.31□□□□□ -1.4
YBX3-218ENST00000546298 AKR1C3P42330 323 aa6.31□□□□□ -1.4
YBX3-218ENST00000546298 EIF5AP63241 154 aaKnown RBP6.31□□□□□ -1.4
YBX3-218ENST00000546298 DNLZQ5SXM8 178 aa6.31□□□□□ -1.4
YBX3-218ENST00000546298 FAM162BQ5T6X4 162 aa6.31□□□□□ -1.4
YBX3-218ENST00000546298 OR11H4Q8NGC9 324 aa6.31□□□□□ -1.4
YBX3-218ENST00000546298 TM2D2Q9BX73 214 aa6.31□□□□□ -1.4
YBX3-218ENST00000546298 HECTD4Q9Y4D8 3996 aa6.31□□□□□ -1.4
YBX3-218ENST00000546298 A0A0D9SG52 128 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 GAGE12JA6NER3 117 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 UMAD1C9J7I0 102 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 KRBOX1C9JBD0 128 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 G3V3Q6 166 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 M0R036 132 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 IGHV3-30P01768 117 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 IGHV3-33P01772 117 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 S100A9P06702 114 aaKnown RBP6.3□□□□□ -1.4
YBX3-218ENST00000546298 ARMS2P0C7Q2 107 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 SEC11BP0C7V7 166 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 IGHV3-30-3P0DP02 117 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 IGHV3-30-5P0DP03 117 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 TPT1P13693 172 aaKnown RBP6.3□□□□□ -1.4
YBX3-218ENST00000546298 GAGE1Q13065 139 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 GAGE4Q13068 117 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 GAGE5Q13069 117 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 ZNF345Q14585 488 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 GAGE13Q4V321 117 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 TOR2AQ5JU69 321 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 KCNRGQ8N5I3 272 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 NTN5Q8WTR8 489 aaPredicted RBP6.3□□□□□ -1.4
YBX3-218ENST00000546298 SFT2D1Q8WV19 159 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 ZC2HC1AQ96GY0 325 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 PHLDA3Q9Y5J5 127 aa6.3□□□□□ -1.4
YBX3-218ENST00000546298 GRIFINA4D1Z8 144 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 H3BVH4 76 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 SH2D1AO60880 128 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 PFDN1O60925 122 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 LTAP01374 205 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 GCSHP23434 173 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 CRIP1P50238 77 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 LAGE3Q14657 143 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 ZNF674Q2M3X9 581 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 LINC01559Q495D7 138 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 MBD3L1Q8WWY6 194 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 Q9HAA7 133 aa6.29□□□□□ -1.4
YBX3-218ENST00000546298 DNAH11Q96DT5 4516 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 IGLV5-52A0A0A0MRZ9 124 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 TRAV8-3A0A0A6YYJ7 113 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 KANTRA0A1W2PQU2 76 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 HMSDA8MTL9 139 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 EPM2AB3EWF7 344 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 SMLR1H3BR10 107 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 PAGE4O60829 102 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 FUSP35637 526 aaKnown RBP eCLIP6.28□□□□□ -1.4
YBX3-218ENST00000546298 FAM74A4Q5TZK3 123 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 UFSP1Q6NVU6 142 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 Q6ZSN1 163 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms