RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 H3BVH4 76 aa14.4□□□□□ -0.1
HMGA2-211ENST00000545998 CXCL1P09341 107 aa14.4□□□□□ -0.1
HMGA2-211ENST00000545998 HOXA5P20719 270 aa14.4□□□□□ -0.1
HMGA2-211ENST00000545998 TCTAP57738 103 aa14.4□□□□□ -0.1
HMGA2-211ENST00000545998 DAZAP1Q96EP5 407 aaKnown RBP14.4□□□□□ -0.1
HMGA2-211ENST00000545998 APLNQ9ULZ1 77 aa14.4□□□□□ -0.1
HMGA2-211ENST00000545998 ARMS2P0C7Q2 107 aa14.39□□□□□ -0.11
HMGA2-211ENST00000545998 ZNF876PQ49A33 203 aa14.39□□□□□ -0.11
HMGA2-211ENST00000545998 TMEM88Q6PEY1 159 aa14.39□□□□□ -0.11
HMGA2-211ENST00000545998 SCRT2Q9NQ03 307 aa14.39□□□□□ -0.11
HMGA2-211ENST00000545998 LY96Q9Y6Y9 160 aa14.39□□□□□ -0.11
HMGA2-211ENST00000545998 ZNF727A8MUV8 499 aa14.38□□□□□ -0.11
HMGA2-211ENST00000545998 IGHV3-53P01767 116 aa14.38□□□□□ -0.11
HMGA2-211ENST00000545998 POM121L12Q8N7R1 296 aa14.38□□□□□ -0.11
HMGA2-211ENST00000545998 NDUFAF3Q9BU61 184 aa14.38□□□□□ -0.11
HMGA2-211ENST00000545998 KMT2AQ03164 3969 aa14.37□□□□□ -0.11
HMGA2-211ENST00000545998 P01737 135 aa14.37□□□□□ -0.11
HMGA2-211ENST00000545998 TRAV4A0A0B4J268 109 aa14.36□□□□□ -0.11
HMGA2-211ENST00000545998 MED14OSP0DP75 135 aa14.36□□□□□ -0.11
HMGA2-211ENST00000545998 FAM74A3Q4VXF1 159 aa14.36□□□□□ -0.11
HMGA2-211ENST00000545998 PIK3CD-AS1Q5SR53 167 aa14.36□□□□□ -0.11
HMGA2-211ENST00000545998 NUDT10Q8NFP7 164 aa14.36□□□□□ -0.11
HMGA2-211ENST00000545998 NUDT11Q96G61 164 aa14.36□□□□□ -0.11
HMGA2-211ENST00000545998 ZNF479Q96JC4 524 aa14.36□□□□□ -0.11
HMGA2-211ENST00000545998 SFTA3P0C7M3 94 aa14.35□□□□□ -0.11
HMGA2-211ENST00000545998 LINC01551Q86U37 167 aa14.35□□□□□ -0.11
HMGA2-211ENST00000545998 OR2D3Q8NGH3 330 aa14.35□□□□□ -0.11
HMGA2-211ENST00000545998 RNASE7Q9H1E1 156 aaKnown RBP14.35□□□□□ -0.11
HMGA2-211ENST00000545998 OR4C5Q8NGB2 326 aa14.34□□□□□ -0.11
HMGA2-211ENST00000545998 PHLDA3Q9Y5J5 127 aa14.34□□□□□ -0.11
HMGA2-211ENST00000545998 TRAV26-1A0A087WT03 109 aa14.34□□□□□ -0.11
HMGA2-211ENST00000545998 RPS20P60866 119 aaKnown RBP14.34□□□□□ -0.11
HMGA2-211ENST00000545998 FHL2Q14192 279 aa14.34□□□□□ -0.11
HMGA2-211ENST00000545998 DMRTA1Q5VZB9 504 aa14.34□□□□□ -0.11
HMGA2-211ENST00000545998 SSBP4Q9BWG4 385 aaPredicted RBP14.34□□□□□ -0.11
HMGA2-211ENST00000545998 RYR3Q15413 4870 aa14.33□□□□□ -0.12
HMGA2-211ENST00000545998 HYDINQ4G0P3 5121 aa14.33□□□□□ -0.12
HMGA2-211ENST00000545998 RYR2Q92736 4967 aa14.33□□□□□ -0.12
HMGA2-211ENST00000545998 RS1O15537 224 aa14.33□□□□□ -0.12
HMGA2-211ENST00000545998 SNAI2O43623 268 aa14.33□□□□□ -0.12
HMGA2-211ENST00000545998 GZMBP10144 247 aa14.33□□□□□ -0.12
HMGA2-211ENST00000545998 CFAP126Q5VTH2 177 aa14.33□□□□□ -0.12
HMGA2-211ENST00000545998 OR5AL1P0C617 328 aa14.32□□□□□ -0.12
HMGA2-211ENST00000545998 TMEM241Q24JQ0 296 aa14.32□□□□□ -0.12
HMGA2-211ENST00000545998 FAM231DQ6ZW35 169 aa14.32□□□□□ -0.12
HMGA2-211ENST00000545998 C15orf53Q8NAA6 179 aa14.32□□□□□ -0.12
HMGA2-211ENST00000545998 SYT8Q8NBV8 401 aa14.32□□□□□ -0.12
HMGA2-211ENST00000545998 A0A0J9YY99 117 aa14.31□□□□□ -0.12
HMGA2-211ENST00000545998 LCE6AA0A183 80 aa14.31□□□□□ -0.12
HMGA2-211ENST00000545998 XKRY2A2RUG3 117 aa14.31□□□□□ -0.12
HMGA2-211ENST00000545998 SOHLH1Q5JUK2 328 aa14.31□□□□□ -0.12
HMGA2-211ENST00000545998 ZFP82Q8N141 532 aa14.31□□□□□ -0.12
HMGA2-211ENST00000545998 LINC00476Q8WZB0 136 aa14.31□□□□□ -0.12
HMGA2-211ENST00000545998 RPP21Q9H633 154 aaKnown RBP14.31□□□□□ -0.12
HMGA2-211ENST00000545998 TRGV4A0A0C4DH28 118 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 H3BNG1 76 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 IGLC6P0CF74 106 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 SLAQ13239 276 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 OR10AG1Q8NH19 301 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 VSIG2Q96IQ7 327 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 PRO0255Q9UI72 69 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 HHLA3Q9XRX5 114 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 DNAH6Q9C0G6 4158 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 A8MWV9 139 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 M0R381 172 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 NXPH4O95158 308 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 CRYBA4P53673 196 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 JPT2Q9H910 190 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 NAT8Q9UHE5 227 aa14.3□□□□□ -0.12
HMGA2-211ENST00000545998 CIDEAO60543 219 aa14.29□□□□□ -0.12
HMGA2-211ENST00000545998 ERVFC1-1P60608 527 aa14.29□□□□□ -0.12
HMGA2-211ENST00000545998 RPL23P62829 140 aaKnown RBP14.29□□□□□ -0.12
HMGA2-211ENST00000545998 LGALS9CQ6DKI2 356 aa14.29□□□□□ -0.12
HMGA2-211ENST00000545998 FER1L6-AS1Q8NA97 138 aa14.29□□□□□ -0.12
HMGA2-211ENST00000545998 PAX4O43316 350 aa14.28□□□□□ -0.12
HMGA2-211ENST00000545998 GATCO43716 136 aaKnown RBP14.28□□□□□ -0.12
HMGA2-211ENST00000545998 NUDT3O95989 172 aa14.28□□□□□ -0.12
HMGA2-211ENST00000545998 MUC21A0A0G2JKD1 596 aa14.27□□□□□ -0.12
HMGA2-211ENST00000545998 MUC21A0A140T8X8 626 aa14.27□□□□□ -0.12
HMGA2-211ENST00000545998 GATA1P15976 413 aaPredicted RBP14.27□□□□□ -0.12
HMGA2-211ENST00000545998 UFSP1Q6NVU6 142 aa14.27□□□□□ -0.12
HMGA2-211ENST00000545998 SFRP2Q96HF1 295 aa14.27□□□□□ -0.12
HMGA2-211ENST00000545998 TPPP3Q9BW30 176 aa14.27□□□□□ -0.12
HMGA2-211ENST00000545998 SPANXN1Q5VSR9 72 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 ZFP2Q6ZN57 461 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 ISOC2Q96AB3 205 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 SAMD10Q9BYL1 202 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 OSTCQ9NRP0 149 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 IGHV3-73A0A0B4J1V6 119 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 A0A1W2PPQ1 181 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 LY6G6CO95867 125 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 ADIRFQ15847 76 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 CT83Q5H943 113 aa14.26□□□□□ -0.13
HMGA2-211ENST00000545998 F2Z2F3 143 aa14.25□□□□□ -0.13
HMGA2-211ENST00000545998 UQCC3Q6UW78 93 aa14.25□□□□□ -0.13
HMGA2-211ENST00000545998 CRYGDP07320 174 aa14.24□□□□□ -0.13
HMGA2-211ENST00000545998 P0DMU3 169 aa14.24□□□□□ -0.13
HMGA2-211ENST00000545998 FAM231AP0DMU4 169 aa14.24□□□□□ -0.13
HMGA2-211ENST00000545998 FAM231CP0DMU5 169 aa14.24□□□□□ -0.13
HMGA2-211ENST00000545998 LYZL1Q6UWQ5 148 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms